Ornithorhynchus anatinus (platypus): 100073852
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Entry
100073852 CDS
T01045
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100073852 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100073852 (CPSF3)
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100073852 (CPSF3)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100073852 (CPSF3)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100073852 (CPSF3)
U7-dependent histone pre-mRNA processing factors
100073852 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100073852
NCBI-ProteinID:
XP_028907305
Ensembl:
ENSOANG00000008577
UniProt:
F6PHY6
LinkDB
All DBs
Position
X1:complement(126506..167466)
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKADALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDDVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADK
KPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLLYQLQKL
TGDVEELEVQQKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKI
QKGAIHKISKKIDMDIYSKRLEIMLQDIFGEDCVSLKDGSILSITVDGKTANISLETRTV
ECEEGSDDDESLREMIELAAQRLYDALTPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaagaggaaagcggacgcgctgatcccggccgaggagagcgaccagctcctc
atccgaccccttggagctgggcaagaagtgggaagatcatgtatcattttggagttcaaa
ggaagaaaaataatgttggactgtgggatccaccctggcctagaaggaatggatgccctt
ccatacattgacctgatagatcctgccgagattgatctcctcttaattagtcatttccac
ttggatcattgcggtgccttaccgtggtttctgcagaagacaagttttaagggacgaaca
tttatgactcatgccacgaaagccatttacagatggctgctttcggattacgtcaaagtt
agtaacatttcagcagatgacatgttgtacaccgaaacagatttggaggagagcatggac
aaaattgaaactattaatttccatgaagtaaaagaagttgcaggaatcaagttctggtgt
taccatgcaggccatgttctgggagccgccatgtttatgattgaaattgcaggtgtaaag
cttttatatacgggggatttctcaagacaagaagataggcatctaatggcagctgaaatt
cctaatattaaacctgatattctaatcatcgaatctacctatgggacccatatccatgag
aaacgcgaagagcgagaggcaaggttctgtaacacggtacatgatattgttaacagagga
gggagaggtcttattcccgtctttgctctgggccgagctcaagagcttcttttgatttta
gatgaatactggcagaatcacccagaactccatgacattcccatatactacgcatcatct
cttgccaaaaagtgcatggcagtataccagacatacgtcaatgcgatgaatgacaaaatc
cgcaagcaaatcaacatcaataatccatttgtcttcaaacacattagcaacctcaagagc
atggatcattttgatgacattggtcccagtgtggtgatggcttcccctggaatgatgcag
agtggcttgtccagagaattgtttgagagctggtgtacagacaaaaggaatggtgtcatt
attgcaggatattgtgtagaagggacacttgccaagcacatcatgtctgaacctgaagag
attacaaccatgtctggacaaaagctgcccctgaaaatgtctgtagattacatttctttc
tctgctcacacagactaccaacaaaccagcgaatttattcgggctttgaagcctccccat
gtgatattagtgcatggagaacagaatgaaatggccagattgaaagcagcgttgataagg
gaatatgaagataatgacgacgtgcacatagaagtccacaaccctaggaatacagaagct
gtgacattaaactttcgaggggaaaaattagccaaggttatgggcttcctggcagacaaa
aaaccagaacaaggccagcgtgtttcagggatactggttaaaagaaattttaattatcac
atactttctccgtgtgacctctccaattacactgatttagctatgagcactgtaaaacaa
actcaagccattccttatactggccctttcaacttgttgctttatcagctacagaaactg
acaggtgatgtggaggaactagaagtccagcaaaagccagcactgaaagtgttcaaaaat
attactgtaattcaggaacctggaatggtagtattagagtggttggcaaatccttccaat
gatatgtatgcagatacagtaacaacagtcatcctggaagttcagtcaaatcctaaaatt
cagaaaggtgcgattcataaaatttctaaaaaaatagatatggatatttatagcaagagg
ctggagattatgcttcaggacatatttggagaagactgtgtaagtctcaaagatggttcc
attttaagtatcacagtggatggaaagactgccaatatatccttggagactcggacagtt
gagtgtgaagaaggaagcgacgatgatgagtcccttcgggaaatgatcgaactggctgca
caaagactctatgacgccctcacgccggttcactga
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