Ornithorhynchus anatinus (platypus): 100074145
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Entry
100074145 CDS
T01045
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100074145 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100074145 (PARN)
Enzymes [BR:
oaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100074145 (PARN)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100074145 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
DUF7722
NCBP3
T6PP_C
RRM_1
DALR_1
Motif
Other DBs
NCBI-GeneID:
100074145
NCBI-ProteinID:
XP_028910218
Ensembl:
ENSOANG00000020155
LinkDB
All DBs
Position
2:complement(52443857..52617680)
Genome browser
AA seq
636 aa
AA seq
DB search
MEMIRSNFKKNLSKVYQAIEEADFLAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQYGLCTFKYDHTESKYVMKSFNFYVFPKPFNRTSPDVKFVCQSSSIVFLANQG
FDFNKVFRCGIPYLNQEEERQLREQLDEKRSQSNGAATLSYVSPNASKCPVTIPEDQKKF
IDEVVEKIEELLQNEENKNLDLEPCTGFQRKLIYQTLNWKYPKGIHIETLETEKKERYIA
VSKVNEEERKKKEQQKQAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTIHQF
YCPLPEDLNEFKEVTACVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKATPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRIMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVEKKHEEKQTKRKWAEDSWKEVERKRLK
TQCTSYVPQSRYYCANSFTPANTVGKRSMSPIKEEAGSEDPETEEEEFSNTEHKQTESLL
GGTKKAKKLKKMKKEHIPAESIKGSSAGLFEVPDTW
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatcaggagcaattttaagaaaaatctaagcaaggtctaccaagccatcgaa
gaagcggattttctggctattgatggggagttttcaggcattagtgatggaccatcggtc
agcgcgttaacaaatggttttgacaccccggaagaaagatatcagaaacttaaaaagcat
tccatggacttcctgctatttcagtatggcctctgcacttttaagtatgaccacacggaa
tcaaagtatgtaatgaagtcatttaacttttatgttttcccgaaacccttcaataggact
tcaccagatgttaagttcgtatgtcagagctcaagcatagtctttttggccaaccaagga
tttgattttaataaagtgtttcgctgtggaattccctatctgaaccaggaagaggaaaga
cagttgcgggagcagttggatgaaaaacgctctcagtcgaacggtgcagcaactctgtca
tacgtatcgccaaatgcctcaaagtgccctgtgactattcctgaagatcagaagaagttt
atcgatgaagtggtagagaaaattgaagaactgctacaaaatgaagaaaacaagaatttg
gatttggagccatgcacaggatttcaaaggaaactaatttatcagacattgaactggaag
tatcccaaaggcatacatatcgagactttagaaacagagaagaaagagcgatatattgct
gttagcaaagtaaatgaggaagagcgcaaaaaaaaggaacaacagaaacaagctaaagaa
caggaggaattgaatgatgctgtaggattttcccgagttattcacgctattgccaattct
ggaaaacttgttattgggcacaacatgctcttagatgtcatgcatacgattcaccagttc
tattgtccactgcctgaggatttgaatgaatttaaggaagtaacagcatgcgtcttcccc
aggctattagatactaagctgatggcaagcacccagccttttaaggaaattattaacaat
acatcccttgcagaactggaaaagcgactaaaagcaactccatttaaccctcctaaagtt
gaaagcgcagaaggatttcccagctatgacaccgcttccgaacagctccatgaagcaggc
tatgatgcgtacattacaggactgtgtttcatctccatggctaacttcctaggttctttt
ctcagtcctccaaaaattcacgtgtctgccagatcaaaactcattgagcctttttttaac
aagttatttcttatgaggatcatggatatcccatatctcaatttagaaggaccagacttg
cagcctaagcgagatcatgttctccatgtgaccttcccaaaagaatggaaaactagcgac
ctttaccaacttttcagtgcctttggaaacattcaggtgtcctggattgatgatacatca
gcatttgtctctcttagtcaacctgaacaagtgcagatagctgttaacaccagcaagtac
gctgaaagctatcggatccagacttacgctgagtatgtggaaaaaaagcatgaagagaag
cagaccaagagaaaatgggcagaagatagttggaaggaggtggagagaaagcggttaaaa
actcagtgcacatcttatgttccacagagtcggtattactgtgccaacagttttacaccg
gcaaataccgtgggaaagagaagtatgagtcctattaaagaggaagctggctccgaagac
ccagagacagaagaagaagaattttccaacacagaacataaacagacagagtcccttcta
ggggggacgaagaaagccaagaaattaaaaaaaatgaagaaagaacacatccctgcagaa
agcatcaaggggagttctgcaggcctctttgaagttcctgatacgtggtag
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