Ornithorhynchus anatinus (platypus): 100074342
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Entry
100074342 CDS
T01045
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100074342 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oaa04990
]
100074342 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
oaa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100074342 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
NMD_SH3
Motif
Other DBs
NCBI-GeneID:
100074342
NCBI-ProteinID:
XP_028916520
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All DBs
Position
3:complement(121524058..121568736)
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AA seq
325 aa
AA seq
DB search
MNTERIVIQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAVANVCIGDVIMAIEGENTDN
MTHLEAQNKIKNCLDKITLTVGRTEHKVWSPLVTEEGKRHPYKMNLASEPQEVTHIGSAH
NRSAIPFSVAAASNTSPRVITAQYNNPAGLYSSENIHNFNSALESKTTAGIQEPSKTPES
ARPQGNITIDKNSEVYKMLQENQDLNGPPKQSASFLVLEEILETGDPNKPSGFRSVKAPI
TKVAASVGNAQKLLMCDKCGAGIVGAVVKLREKYRHPECYVCSDCGINLKQKGHFFVEEQ
IYCEKHAREHVTPPEGYDVVTVFPK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggagcggatcgtcatccagggcccggggccgtggggcttccgcctggtggga
ggaaaggacttcgagcagcccctcaccatctccagggttactccgggaagcaaggcagca
gttgctaatgtatgtattggagatgttatcatggccatcgaaggagaaaacacagataat
atgactcatttagaagcccagaataaaatcaagaactgcctagataaaataacgctaaca
gttggcagaacggaacacaaagtctggtctcctcttgtgactgaggaagggaaacgccac
ccatacaagatgaatttagcttccgaacctcaggaagtaacgcacatcggaagcgcacac
aaccggagtgcaatacccttctccgttgccgccgcttccaacacttcccccagagtcatc
accgcccagtacaacaacccggctggcctctactcttcggaaaacatccacaacttcaac
agtgccctggagtcgaagaccacagccggcatccaggaaccaagtaaaaccccagagtcg
gcccgtcctcaaggtaacatcaccatagacaagaactcggaggtttacaagatgcttcag
gagaaccaagacttaaatgggcctcccaaacaatctgcttcattcttggtgttggaggaa
atcctggagactggggaccccaacaagccctcgggatttagaagtgtaaaagcaccgatc
accaaagttgccgcttcagttggaaatgcccagaagttgctcatgtgtgataaatgtggt
gccggcattgtaggggcggttgtgaagcttcgggagaagtaccgtcacccagagtgctac
gtgtgcagcgactgtgggataaacctcaagcagaaggggcacttcttcgtggaggagcaa
atatactgcgaaaagcacgcccgggagcacgtgacccccccggaaggctacgacgtggtg
actgtgtttccaaaataa
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