Ornithorhynchus anatinus (platypus): 100074759
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Entry
100074759 CDS
T01045
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03013
Nucleocytoplasmic transport
oaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100074759 (UPF3A)
03015 mRNA surveillance pathway
100074759 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100074759 (UPF3A)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100074759 (UPF3A)
mRNA cycle factors
P-body specific factors
100074759 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
100074759
NCBI-ProteinID:
XP_028913291
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All DBs
Position
2:complement(136353360..136382017)
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AA seq
536 aa
AA seq
DB search
MRAEREAAGGASEVSGPGRGAAGRERPPLPPLPPPPPPPPPASAAARAGRMDGPFCREPP
RREPGTPPPPPPPPPPPPPPPPPPPPPPPPPLPPGPAAPGAAKPRDDKKTVLSKVVIRRL
PPTLTKEQLEEQLHPLPAHDYFEFCAADPSLYPHLYTRAYINFRNPDDILLFRDRFDGYV
FIDSKGLEYPAVVEFAPFQKISKKKLKKKDAKAGTIEEDPEYRKFLETYCVDEEKISANP
ETLLGEIEAKTRELIARRTTPLLEYIRSRKLEKQRIREEKREERRRRELEKKRLREEEKR
KRREEERRKRKEAEKQKKIAEKEIRIKLLKKPEKGEDSVSEKPTEKGEEADVEEGRWEKS
PGPGGVKTKSLESSVKELKDKSQNDSDKEQREAERRFCEREPERQRYRSDDGRKHRAHYE
PDKFLRRNEDELKWGKGFHQDRGKRGFYNYRFTVEAVDTLGKEDKCDDMASQTERIRNKD
RPAMQLYQPGAHTRTRSATAAKSPSFGGKSGEEAGDGKCEAEASTGASPEKSEEAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggagcgagaggcggccggcggggcctccgaggtgtccgggcccgggcggggg
gcggccgggagggagaggccgcctctccctcctctcccgccgccgccgccgcctccgccg
cccgcctcggccgccgcccgcgcggggaggatggacggacccttctgccgggagccgccg
cggagggagccggggaccccgccgccccctcctccgccgccgcctcctcctcctcctcct
cctcctcctcctcctcctcctcctcctcctccgctcccgcccggaccggccgcgcccggc
gccgccaaacccagggacgacaagaaaaccgtcctcagcaaggtcgttattcgccgactt
cctcccaccctgacgaaggagcagctagaggagcagttgcatcctcttcccgctcatgat
tattttgaattctgtgcagcggatcccagtctttatcctcatctctacacgagagcatac
attaattttagaaaccccgacgacatccttctcttcagagatcgtttcgacggatacgtc
ttcattgacagtaaaggtctggaatatccagccgtggtagaatttgctccgttccaaaag
atttccaaaaagaagttgaagaaaaaagatgccaaagcaggaacgattgaagaagatcca
gaatataggaagtttttagaaacgtattgtgttgatgaggagaaaataagtgccaaccca
gaaactctcttaggagaaatagaggcgaagacgcgggaactcattgcgagaagaacaaca
cctcttttggaatatattagaagcaggaaattagaaaagcagagaatccgggaagagaaa
cgggaagagcgaagacggcgagagctagaaaagaaacgcctgagagaagaagagaagagg
aaacgccgggaagaagagagacggaaaaggaaagaggcagagaagcagaagaaaattgct
gagaaagaaataaggatcaagcttcttaagaagcccgaaaagggcgaggattcagtctca
gagaaaccaacagagaaaggcgaggaagccgatgttgaagaaggaaggtgggagaaatcc
cctggccctggcggcgtgaaaaccaaatccttggagagctctgtgaaggaactcaaggac
aagtcccaaaacgacagcgataaggagcaaagggaggcggagagaagattttgcgaaaga
gaacccgaacggcaaaggtatcgctcggacgatggcagaaagcatagagctcactatgag
cctgacaagtttttgagaaggaacgaagacgagctgaaatgggggaaaggattccaccaa
gacagagggaagagagggttctacaattaccgcttcacggtggaggctgtagacactctg
ggtaaagaggacaagtgtgatgacatggcatcccaaacggagcgcataagaaataaggac
cgaccggccatgcagctctaccagcccggagcccacactcgaacacgttcggccaccgcc
gctaaatcccccagcttcggcggaaagtccggcgaagaagccggtgatgggaagtgtgag
gcagaggcttcaactggagctagtcctgagaagagtgaagaggccgagtaa
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