Ornithorhynchus anatinus (platypus): 100075619
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Entry
100075619 CDS
T01045
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03030
DNA replication
oaa03420
Nucleotide excision repair
oaa03430
Mismatch repair
oaa03440
Homologous recombination
oaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100075619 (RPA1)
03420 Nucleotide excision repair
100075619 (RPA1)
03430 Mismatch repair
100075619 (RPA1)
03440 Homologous recombination
100075619 (RPA1)
03460 Fanconi anemia pathway
100075619 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oaa03000
]
100075619 (RPA1)
03032 DNA replication proteins [BR:
oaa03032
]
100075619 (RPA1)
03400 DNA repair and recombination proteins [BR:
oaa03400
]
100075619 (RPA1)
Transcription factors [BR:
oaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100075619 (RPA1)
DNA replication proteins [BR:
oaa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100075619 (RPA1)
DNA repair and recombination proteins [BR:
oaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100075619 (RPA1)
MMR (mismatch excision repair)
100075619 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100075619 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Por_Secre_tail
Motif
Other DBs
NCBI-GeneID:
100075619
NCBI-ProteinID:
XP_001507100
Ensembl:
ENSOANG00000010880
LinkDB
All DBs
Position
17:complement(5585987..5618205)
Genome browser
AA seq
619 aa
AA seq
DB search
MSGRLSEGAIAAIMQQGDSPEKPILQVINIRAISTGNGPNRYRLLMSDGLNTLSSFMLAT
QLNSLVEEERLSTNCICQINRFIVNSLKEGRKVIILMDLEVLKLAEEVGGKIGNPVPYNE
GAGQQQTTPAPGPTAIPPASKPQQQNGSSGLGSAGTKSYGPAKSFAKTGSSNLLNTPGGS
HSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFND
QADKFFPLIEVNKVYYFSKGSLKIANKQFTAVKNDYEMTFNNETSVVPCEDAHHLPTVQF
DFTGIGDLENKSKDSLVDIIGICKSYEEANKITVKSNNREVSKRNIHLMDMSGKLVTATL
WGDDAEKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAFKLRGWFDSEGK
GLDCISISDLRSGGGGGGSSTNWKTLYEVKAENLGHGDKAEYFSCVGTVVYLRKENCMYQ
ACPSQDCNKKVIDQQNGLYRCEKCDCEFPNFKYRMILSANIADFQENQWVTCFQESAEAI
LGQNTMFLGELKEKNEQAFEEVFQNANFRSYVFRIRVKLETYNDESRIKASVMDVKPVDH
REYGKRLIANIRRNAAQMM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcgtctgagcgagggggccattgcggccatcatgcaacagggagattctcct
gaaaaacctattctccaagtcattaacatccgggccatatctacggggaatggccccaac
cgttaccgactcctcatgagtgatggattgaacactctctcctctttcatgttggcaacc
cagttgaactctctggttgaagaagaacgcctgtccacaaactgcatctgccagattaac
cggttcatcgtgaactccctgaaagaaggaaggaaagtgattatattgatggatttggaa
gttctgaaacttgccgaagaagttggagggaagattggcaacccggtgccgtacaatgaa
ggggccgggcaacagcaaacaactccagctccgggccccactgccattccaccagccagc
aagcctcagcagcagaatggaagctcaggattgggttcagcgggaacaaagagctatggg
cctgcaaagtcattcgctaaaactggaagcagtaatttattgaatacgcccggtggatct
cattccaaagtggtccccatagccagtctaaccccataccagtccaagtggaccatttgt
gctcgagttactaataaaagtcagatccgcacctggagcaactcccgaggggaaggcaag
ctattctcgatagagttggttgatgaaagtggggagattagagctactgctttcaacgat
caagctgacaagtttttccctcttattgaagtgaacaaggtgtactatttctccaaaggc
agcctgaaaattgctaataagcaatttacagccgttaaaaacgactacgagatgaccttc
aataacgagacttcggtcgtgccctgcgaagatgcccaccatttacccacagttcagttt
gacttcaccgggattggtgatctggaaaacaaatctaaagactcccttgtagacatcatc
ggcatctgcaagagctatgaggaggccaataaaatcacagtaaagtcaaacaacagggaa
gtgtccaagaggaacatccacttgatggacatgtcggggaagttggtgactgctacgttg
tggggggacgatgccgagaaatttgatggctctaggcaaccggtgatggccatcaaagga
gccagagtctctgattttggagggcggagcctgtccgtcctatcttcgagcaccgtcatc
atgaaccctgatattccggaagcctttaagcttcgaggatggtttgactcagaaggaaag
ggtctagattgcatttcaatctccgatctgaggagcggaggaggcggtgggggaagtagt
accaactggaagactttgtatgaggttaaagctgagaacctgggccatggcgataaggct
gaatattttagctgcgtgggcacagtggtatacctgcgcaaagagaactgcatgtaccag
gcctgtccctctcaagactgcaataagaaagtgatagaccagcagaatgggctgtaccgc
tgtgagaagtgtgactgtgaatttcccaacttcaagtaccgcatgatcttgtcggccaac
attgctgattttcaagagaaccagtgggtgacttgtttccaggagtctgccgaagccatc
ttggggcaaaatactatgtttctgggagagttgaaagagaagaacgagcaggcattcgaa
gaagtgtttcagaatgccaacttccgttcctacgtgttcaggatccgggtcaagctggag
acttacaatgacgagtctcgaataaaggcatcggtcatggacgtgaagcccgtggaccac
cgtgaatacggcaagcggttgattgccaatatcaggagaaacgcggcacagatgatgtga
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