Ornithorhynchus anatinus (platypus): 100075650
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Entry
100075650 CDS
T01045
Symbol
PDZRN4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oaa04121
]
100075650 (PDZRN4)
Enzymes [BR:
oaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100075650 (PDZRN4)
Ubiquitin system [BR:
oaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100075650 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
Sina_ZnF
Tricorn_PDZ
TRAF3_RING
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100075650
NCBI-ProteinID:
XP_028914540
LinkDB
All DBs
Position
2:149821484..150272143
Genome browser
AA seq
1023 aa
AA seq
DB search
MGFDLDRFPEAVDPDLKCKLCGQVLEEPLATPCGHVFCAGCLLPWAAREGLCPLRCRPIA
PAQLHRVLPLRSLVRKLRVKCDYSGRGCGRTVRLRELAAHVRRCAFRGRRRRRRRRRERQ
AGGLPGGGGXAGGAGGAGGGGAGGGGGGGRXPAALAWSRRERWLLAQLWALQSEVRLTAL
TYRERFNLSVARVRTVAGNLAAARPTGGDSKLLTIVLQRENDTLGFNIIGGRPNQEESSA
EGIYVSKILANGPADKTDGLEIHDRIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRR
TPNSKTTTTHPSPQDVQLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSL
HPMEHEFYEGNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIY
VSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKKIVLLVARPEMQVD
EGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEK
DSGVGRTDESLRNEESSEQENAAEERNGPSLKSKRELGQSQDTLGSTELQCNESLVSGEY
VDSDGLGNQDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRDGDQEGVEHELQLLN
EELRSIELECQSIMRAHRLQKVRDQYGDLWALPDAGFRNYNTSVDGQRGKLDDILEHPEK
SDKDSSSAYNTAESCRSTPLTVDRSPDSSLQRTISLTNRKNLRSTIAAHQLASGLAGREA
TSSPTPEAAEHVDPTEDREGVPESGRGSDREQAQPEHIPYLSPYHGSTSRYAHIPAHARH
YQSYMQLIQQKSAVEYAQSQLSLVSMCKDAQRGPEPKMEWKVKIRSDGTRYITKRPVRDR
ILKERALKIKEERSGMTTDDDTVSELKMGRYWSREERKQHLVRAKEQRRRREFMARSRLE
CLKESPQSGSEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSV
TTV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacctggaccgcttccccgaggcggtggacccggacctgaagtgcaagctg
tgcggccaggtgctggaggagccgctggccaccccctgcggccacgtcttctgcgccggc
tgcctgctgccctgggcggcgcgggagggcctgtgcccgctccgctgccgccccatcgcg
cccgcccagctgcaccgggtgctgcccctccgcagcctcgtccgcaagctgcgggtcaag
tgcgactacagcgggcggggctgcgggcggaccgtgcggctgcgggagctggccgcccac
gtccgccgctgcgccttccggggccgccgccgccgccgccgccgccgccgggagcgccag
gccggagggctgcccggaggcggcggcncggcgggaggagcgggaggagcgggaggagga
ggagcaggaggaggaggaggaggaggaaganngccggccgccctggcctggagccggcgg
gagcgctggctgctggcgcagctgtgggcgctgcagagcgaggtgcggctcaccgccctc
acctaccgggagaggttcaacctgtccgtggcccgcgtccgcaccgtggccgggaacctg
gccgccgcccggcccacgggaggagactccaagctactaaccattgtgctacaaagagaa
aatgacactttgggattcaacattataggaggacgaccaaatcaggaggaatcttcagct
gaaggcatttatgtttccaagattttggcgaatggacctgctgataaaaccgacggccta
gaaatccacgacaggatcattgaggtcaatgggaaggatctgtccaaggccacccatgaa
gaggcagtggaagcttttcgtaatgccaaggagcccattgtagttcaggttttacggaga
acaccaaacagcaaaacaacaacaacccatcccagcccccaggatgttcagctcatggat
gccagcacccagacggacatcacctttgaacacatcatggcgctggcaaagcttagaccg
tccacccctcccgttcctgacatctgtccattccttctctcggacagctgccattctctt
catccaatggaacatgaattttatgaagggaacgaatacctatccagcctgcctgccgat
gcagatagaacagaagactttgagtatgaggaggttgagctgtgtcgtgttagtagtcaa
gagaagctggggctgactgtctgttatagaacagatgatgaggaagacactggaatttat
gtgagcgaggttgatccaaatagcatcgcggccaaagacggtagaatccgagagggagac
cgtatcttgcaaataaatggggaagacgtccaaaaccgggaggaagcggtggccctgttg
tccagcgatgaatgcaagaaaattgtgctactggtggcaagacccgagatgcaggtggat
gaaggatggctggatgatgaaagaaatgaattcttagaggagttaaacttagaaatgctg
gaagaacagcataatgaagcgatgcagtacacagccaatgaggtggagcagcccaagaag
cacgaggaggaggatggcaccaccgacacggcaacctcttcgtccaataaccacgagaag
gacagcggggtggggcggaccgatgagagcctgcgcaatgaggagagctcggagcaggag
aatgccgccgaggagcggaatggcccgtcactgaagagcaagcgcgagctgggccagagc
caggacacgctagggagcaccgagctccagtgcaacgagagcctggtgtccggagaatac
gtcgactcggatgggctcgggaaccaggatgaagagtgcgagaggttccgacagctgttg
gagctcaagtgcaagatccgaaatcacggtgagtacgatctgtactactcgagcagcacc
atcgagtgcaacagagacggcgaccaagagggggtggagcacgagctccagcttctgaat
gaggagctgaggagcattgaactggagtgccagagtatcatgcgagctcacaggcttcag
aaagtcagagaccaatacggagacctctgggcgctgcccgacgcagggttccgaaactat
aacaccagcgtggacgggcagaggggcaaactcgacgacatcctcgagcacccagagaaa
tccgacaaagacagctccagcgcgtataacacggccgagagctgcaggagcacgccgctg
actgtggaccgctcccccgacagctctcttcagaggacgatcagcctcaccaaccggaaa
aacctgaggagcaccattgcggcccaccagttggcctctgggctggctggccgggaggcc
acctcgagcccgaccccggaggccgccgagcatgtggatcctaccgaagaccgggagggg
gttcccgagagtggccgaggttcagaccgggagcaggcccagccggagcacatcccttac
ctctccccgtatcacggctcgacctccaggtacgcccatatccctgcccacgcccggcat
tatcagagctacatgcagctcatccagcagaaatcggccgtggaatatgctcagagccag
ctcagcctggtgagcatgtgcaaagacgcccagagaggtcccgagcccaagatggaatgg
aaagtgaagatccggagcgacgggacccgctacatcaccaagaggcccgtgcgtgaccgc
atcctaaaggagcgtgccttaaagatcaaagaggagcgcagcggcatgaccacggatgac
gacaccgtgagcgagctgaagatgggtcgctattggagccgagaggagcggaagcagcac
ctggttagggccaaggagcagcggaggagacgggagttcatggcccgcagccggctcgag
tgcctcaaggagagcccccagagcggcagcgaggtcaacatcatcgaactcagccacaag
aagatgatgaaaaagaggaacaagaaaatcctggacaactggatgacaatccaagaactc
atgacccacggcgccaagtctcccgacggcaccagagtccacaacgcctttttgtcggtt
actactgtatga
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