Ornithorhynchus anatinus (platypus): 100075984
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Entry
100075984 CDS
T01045
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa02010
ABC transporters
oaa04148
Efferocytosis
oaa04975
Fat digestion and absorption
oaa04979
Cholesterol metabolism
oaa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100075984 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100075984 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100075984 (ABCA1)
04979 Cholesterol metabolism
100075984 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100075984 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oaa02000
]
100075984 (ABCA1)
Transporters [BR:
oaa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100075984 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
100075984
NCBI-ProteinID:
XP_028911546
Ensembl:
ENSOANG00000002826
UniProt:
F6ZIQ6
LinkDB
All DBs
Position
X5:22184512..22321791
Genome browser
AA seq
2266 aa
AA seq
DB search
MAFWSQLGLLLWKNFTFRKRQTFQLFLEVAWPLFIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMRDIQKLLGILQKFGNYSPSLKLQDFLVDNETLSGFLLHNLTMSQAAVAEILNAEVNLQ
QVVVSGYRMSLQNLCNGTKLTEFVKINDQALAELNESIICALPKENLEAAEQIFRSNLDP
FKPILARINSKIALPAQDLAEAMEDLLKSLGNLAKELVSMKSWSDMRQEVMFLTNVNITS
SSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAVNFYDNSTTPYC
NDLMKNLESSPLSRIIWKALKPLLIGKILYTPDTPATRRVMSEVNKTFQELAVFHDLEGM
WEEVSPKIWTFMEDSQEMDLIRTLLGNKGNSHLWDLHLNGSDWTVRDIVAFLAKHPEDHQ
SSNGSMYNWRDAFNETNRAIQTISRFMECVNLDKLEPVSSEGRLINKSMELLDERKFWAG
IVFTGVAPDSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAY
LQDVVEQAIIRTLTGIQKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVI
IKGIVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLILKIGNLLPYSDP
SVVFLFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVDFSL
KILASLLSPVAFGFGCEYFALFEEQGIGVQWDNVFESPLEEDGFNLTTSISMMLFDTFLY
GVMTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEESDVKSHPGSSRKGASEICVEEEPSHL
RLGVSIQNLVKVYRDGKKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEENVKAEMQQM
VLDVDLPHKLKTKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRRIWELLL
KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVD
SSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSVISNLIMKHVSEARL
VEDIGHELTYMLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNG
VDAETSDGTLPARRNRRAFGDRQSCLRPFTEDDASVDPNDSDVDPESRETDLLSGMDGKG
SYQVKGWKLTRQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYP
SLELQPWMYNEQYTFVSNDAPGDANTQKLLNALTNDPGFGTRCMEGSPIPDAPCLVGEDQ
WTTAAVPETVMDIFLKGNWTMENPSPACECSNDKIKKMLPVCPAGAGGLPPPQRKQHTAD
ILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQTLPPSDEVSDAI
KQVKKLFELDKGSAADRFLNSLGSFMTGLDTKNNVKVWFNNKGWHAIGSFLNVINNAILR
ANLQEGENPSTYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVVIIFICFQQKSYVSSTNL
PVLALLLLLYGWSITPLMYPASFIFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNK
LNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFA
MAVEGVVFFLITVLIQYRFFIKPRPVCAKLPPVNDEDEDVRRERQRILDGGGQNDILEIK
ELTKVYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTNVTGGDAFLNKN
SILSDIQEVHQNMGYCPQFDAINELLTGREHVEFFALLRGVPDKEVGKVGEWAIRKLGLL
KYGEKYAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPV
QEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQNKKRLHIEDYSVSQTTLDQ
VFVNFAKDQSDDDHLKDVSLHKNQTVVDVAILTSFLQDEKVKESYV
NT seq
6801 nt
NT seq
+upstream
nt +downstream
nt
atggctttttggtctcagcttggactgctgctttggaagaattttactttcaggaaaaga
caaacatttcagctgttcctggaggtggcctggccactgtttatcttctttatattgatt
tcagtacgacttaactacccaccctatgaacaacatgaatgccactttccaaacaaggcc
atgccctctgcaggaacacttccttgggttcaagggattatctgcaatgccaacaatccc
tgtttccgttacccaacccctggggagtctcctggagttgttggaaactttaacaagtcc
attgtctctcgtctattctcagatgcccggagattgcttttgtacagccagaaagacacc
agtatgagggatatccagaagcttttgggaattttgcagaagtttgggaattacagccca
agcttgaagcttcaggacttcttagtggacaatgaaaccttatcaggatttctccttcac
aacctgaccatgtcacaggctgctgtggcagagatactgaatgctgaagtcaacctccaa
caggtggttgtgtctggctaccggatgagcttgcaaaatctctgtaatggaaccaaatta
actgagtttgttaaaatcaatgaccaggcattagcagagctcaatgaaagcattatttgt
gcactgccaaaggaaaatcttgaagcagcagagcaaatctttcgttctaacctggatcct
tttaaacccattctggccagaataaactctaaaatcgccctcccagcccaggacctggca
gaagctatggaggatttgctgaagagcctaggaaacctcgccaaggaactggtgtccatg
aagagctggagtgacatgaggcaggaggtgatgtttctgacaaatgtgaatatcacaagc
tcttccacccagatataccaagcagtgtcaagaattgtgtgtggtcaccctgagggtgga
gggctaaaaatcaagtccctcaactggtatgaagacaacaactacaaagcactcttcggg
ggtaacagcactgaagaagatgcagtgaatttctacgataattctacaactccttactgc
aatgatttaatgaagaatttggaatccagtcccctttccagaattatctggaaggctctg
aagcctctgcttattgggaagatcctgtatactcctgacacacctgccacaaggagggtc
atgtcagaagtgaacaagacattccaggagctggctgtattccatgacctggaagggatg
tgggaggaggtcagtccgaagatttggacattcatggaggacagccaggaaatggatctc
atccggacactgttaggcaacaaaggaaacagccatctctgggacctgcacttgaatggc
tcagactggacagtgagagatatcgtagcattcttggcaaagcacccagaggatcaccag
tcaagcaatggttccatgtacaactggagagatgcattcaacgagacaaaccgagccatc
cagacaatatctcgcttcatggagtgcgtcaacctggacaaactcgaaccggtgtcttcc
gaaggccggctcatcaacaaatccatggaattgctggatgagagaaagttttgggctggc
attgtattcactggagttgccccagatagtgttgaattaccccaccatgtcaagtacaag
atacggatggacattgacaatgtggaaaggacaaacaaaatcaaagatgggtattgggat
cccggtcctagggctgacccttttgaagatatgcgctacgtctggggaggttttgcttac
ttgcaggatgtggttgagcaagcaatcatccgaaccctgacaggcattcagaagaaaact
ggagtctatgtacagcagatgccctacccttgttacgtagatgacatattcctgcgtgtg
atgagccgttcaatgcctcttttcatgaccctggcttggatctactctgtggctgtgatc
attaaggggatcgtgtatgagaaggaagcccgactgaaagagaccatgaggatcatgggt
ttggacaatggcatcctctggtttagctggttcattagcagtctcatcccacttctcatg
agtgcaggcctgctggtgctgatattgaagataggaaacttgctgccctacagtgacccc
agcgtggtgtttctcttcctctcggtttttgccgtggtgaccatcctgcagtgtttcttg
atcagcacgctgttctccagagctaacttggctgcagcctgtggagggattatctacttc
acactctaccttccctatgtcttgtgcgtcgcctggcaggactatgtggacttctcactt
aagatccttgctagcttgctgtctccagtagcgtttggatttggctgtgagtattttgcc
ctctttgaggagcagggcatcggcgtgcagtgggacaatgtctttgagagccctctggag
gaagatggcttcaacctcaccacatcgatctcgatgatgctgtttgataccttcctgtac
ggggtgatgacctggtacattgaagctgttttcccaggccaatatggaattcccaggccc
tggtatttccctttcaccaagtcctactggtttggagaggagagtgatgtcaagagccac
cccggttccagtcgaaaaggagcatctgaaatctgcgtggaagaggagcccagtcacctg
aggctgggggtttccattcagaatctggtgaaggtttaccgtgatggcaaaaaggtggca
gtagatggacttgcactgaatttctatgaaggccagatcacctctttcctgggacataat
ggagctggaaaaaccactaccatgtccatcttgacgggcttatttcctcccacctcaggc
actgcctatatcctgggtaaagatatacgttctgaactcagcaccatcaggcagaactta
ggtgtttgtcctcagcataatgtcctatttgacatgctgacagtagaggaacacatctgg
ttctatgcccgattaaaagggctgtccgaagagaacgtcaaagcagagatgcagcagatg
gtactggatgtcgacttaccgcacaaattgaaaaccaaaacgagtcagttgtccggtggc
atgcagagaaagctatcagttgccttggcctttgttggtggatcaaaggttgttatttta
gatgaaccaacagctggggttgacccttactctcgaagaagaatatgggaactgctgttg
aaatatcgacaaggtcgtacgatcatactttccacgcatcacatggatgaagccgacatc
ttgggagatagaattgccatcatttctcatggaaaattgtgctgcgttggctcttccttg
tttttgaagaatcagctgggaacggggtactatctgacccttgtcaagaaagatgttgac
tcatccctgagttcatgtcgaaacagcagcagcacagtgtcttatctgaaaaaggaggac
agtgtttctcaaagcagctctgatgctggcttgggcagcgatcatgaaagtgacaccctg
acaatagacgtttctgtcatctccaacctgatcatgaagcatgtttccgaagcccgcctg
gtggaggacattgggcacgagttaacctacatgctaccgtatgaagctgctaaagagggc
gcgtttgtggagctcttccatgaaatcgatgatcgactctcagaccttggcatttccagt
tatggcatctctgaaaccacactggaagaaatatttcttaaagtggctgaggataatgga
gtagatgcagaaacctcagatggcactctgcctgctcggaggaacagacgggcctttggg
gatcgtcagagctgcctgcgtccgtttaccgaggacgatgcgtccgttgacccaaatgac
tctgatgttgatccagaatccagagagacagacctcctcagtgggatggatggtaaaggc
tcctaccaagtgaagggctggaaactcacccgacagcaatttgtagcccttctgtggaag
aggctgttgattgccagacgcagcagaaaaggattctttgctcagatcgtcttgccagcg
gtttttgtctgtatcgccctcatgttcagcttgattgtacctccctttggcaagtacccc
agcctggaactacagccgtggatgtacaacgagcagtacacatttgtcagcaacgatgct
ccaggagatgcaaatactcagaagctcttgaatgctcttaccaatgaccctggctttgga
acccgttgtatggaaggaagcccaattcccgatgcaccctgcttagtcggtgaagatcaa
tggaccacagctgctgtgcccgagaccgtcatggacatcttcctgaaagggaactggaca
atggagaacccgtcccctgcctgcgagtgtagtaatgataaaattaagaaaatgctgcca
gtgtgccctgcaggagctgggggactgcctccccctcaaagaaaacaacatacagcagac
atcctccagaacctgactgggagaaacatttcggattacttggtgaagacgtatgtccag
attattgccaaaagtttaaagaacaagatttgggtaaatgagtttaggtatggtgggttt
tctctgggcgccagcaattcacagacacttcctccaagtgatgaagttagtgacgccatt
aagcaagtgaagaagctcttcgaattggacaagggcagtgctgcagatcgatttctcaac
agcttgggaagcttcatgactggattagacaccaaaaataatgtcaaggtatggttcaat
aacaagggctggcatgccattggctctttcctgaatgtcataaacaatgccattcttcgg
gccaacctgcaggagggagagaaccccagcacctacgggattaccgctttcaatcacccc
ctgaacctaaccaaacaacagctctccgaagtagctctgatgaccacatcggtagatgtt
ctagtttccatttgtgtgatcttcgccatgtctttcgtcccagcaagctttgtggtattt
ttgatccaggagcgagtcagcaaagcgaaacatctgcagttcattagtggtgtgaaacct
gttatctactggctttcaaattttgtctgggatatgtgcaactatgtggtacctgccacc
ctcgtcgtcatcatcttcatctgcttccaacaaaagtcctatgtgtcctccaccaatctg
cctgttctggctctccttctcttactctatgggtggtcaataacgcctctcatgtacccg
gcctcctttatattcaagatccccagcacagcttacgtagtgctgaccagtgtaaatctc
ttcattgggatcaatggaagcgttgccacgttcgtcctggaactcttcactaacaacaaa
ctgaacaacatcaatgacatcctgaaatctgtgttcctgatcttccctcacttctgcttg
ggtcgaggactaattgacatggtgaaaaatcaggcaatggctgatgccctggaaagattt
ggagagaatcgttttgtctcaccactgtcctgggatttggtaggacggaacctctttgcc
atggcagtagaaggggtagtgttcttcctcatcactgtgttaatccaatacaggttcttc
atcaaaccaagacccgtatgtgcaaaacttcctcctgtaaatgatgaagatgaggatgtg
aggagagaaaggcagaggatacttgatggcggaggtcagaatgatatcctggaaataaag
gagctgaccaaggtctatagaatgaagaggaagcctgccgttgaccggatctgtgtggga
attcctcccggagagtgctttggacttctgggagttaatggtgctggcaaatcatcaact
ttcaaaatgctaaccggagacaccaacgtgaccggaggagatgcttttctcaacaaaaac
agtatcttgtcagacatacaggaagtgcaccagaacatggggtattgtccacagtttgat
gctattaatgagctactgacagggagagagcatgtggaattctttgccctcctcagaggt
gtacccgataaagaagttggcaaggttggtgaatgggcaattcgcaaactgggacttttg
aagtatggagagaaatacgctgggaactatagtggaggaaacaaacgcaaactatctact
gccatcgcattgattgggggaccacctgtggtgtttttggatgagccaaccaccggcatg
gatccgaaagcccgtcgcttcctgtggaactgtgcccttagcgttatcaaagagggcaga
tctgtggtgctcacatctcacagcatggaagaatgtgaggccctgtgcactcgaatggca
atcatggtcaatggaagattcagatgtcttggcagtgtccaacatttaaagaataggttt
ggagacggttatacgatagtagttcgaatagcagggtcaaaccctgacctgaagccggtt
caggaattctttggacttgcctttccgggaagtgtccttaaagaaaaacaccggaacatg
ctgcagtaccagctcccatcttcactgtcctctctggccaggatattcagcatcctctcc
cagaacaaaaagagactgcacatagaagactactctgtttctcagacgacacttgaccaa
gtatttgtaaactttgccaaggaccaaagtgacgacgaccacttgaaggatgtgtcatta
cacaaaaaccagactgttgtagatgtcgctatcctcacgtcatttctgcaagatgaaaaa
gtgaaagaaagttacgtatga
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integrated database retrieval system
