Ornithorhynchus anatinus (platypus): 100076638
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Entry
100076638 CDS
T01045
Symbol
DDX20
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oaa03041
]
100076638 (DDX20)
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100076638 (DDX20)
Spliceosome [BR:
oaa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100076638 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
AAA_19
SiaC
CMS1
Motif
Other DBs
NCBI-GeneID:
100076638
NCBI-ProteinID:
XP_028925479
LinkDB
All DBs
Position
7:complement(57494372..57510299)
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AA seq
966 aa
AA seq
DB search
MVVMMAAAGDAEPSAGVSSGPASSGLSSSGLSSPGLSSSGLATSGLATSGPAASDPSSGL
SSGLSSSGPSSSGPSSGLCSSGLASSGLSSGLASCLSSSGPSSSGLSSGLSSGLSSSGLS
SSGLSSSGLSFSGLSSSGLSSSGLSSSGLSSSGLSSSGLSSSVPSSCGLSWPPPPGCGRG
VGGCGAAPAVRPPRPRTGDVLPAEPADFGALLLSRPVLEGLRAAGFQRPSPVQLQAIPLG
RCGLDLIVQAKSGTGKTCVFSTVALDSLILENPSTQILVLAPTREIAVQIHSVITAIGIK
MEGLECHVFIGGTPLSQDKSRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKL
LEEGSFQEQINWIYSSLPANKQMLAVSATYPEFLANALTRYMRDPTFVRLNSSDPSLIGL
KQYYKVVNSHPLPHKTFEEKTEHLQELFSQIPXNQALVFSNLHSRAQHLADILTSKGFPA
ECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPVDWETYMHR
IGRAGRFGTLGLAVTYCCRGEEENVMMTIAQKCNLNLFCLPDPIPAGLMEECLEWDVEVK
AAEPSARPVSAPRLPLEKAALKPDRERPRAVQSHAAPPDPAASPAITAKSKRSKPKLSRK
DPGNWLHPEQAEPPNSAQPLGPGTKALQTSGQSGSSKPQGKEASQSPLPKIPCLSSFKAQ
LPSKTWTFAELVEDYEHFIKEGLEKHVQVIRHYTGPEEQTGPPQNGPAERRESEDGERAP
VSQVQSEYSDSEGDSYSSGASSSCKGNESHLEGSSDSQAQEDGRDVDPGDWILPSQGPKV
RATPGPEPEGPPQIHTRRLGKGQSAKQSAKRSRKRVAQRSPCPFQRELREESWDDCPGDR
AADRLRGFGSDPQSYENYWRSYYQAWQHYYMSASHLYSRNLQRHSNWMTAYHMNAVYLQE
LMRGDL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatgatggcggcggcgggggacgcggagccttcggcgggcgtctcctcgggc
ccggcctcctcaggcctctcctcctcgggcctctcctccccaggcctgtcctcttcaggc
ctggccacctcgggcctggccacctccggcccggccgcctccgacccgtcctccggcctg
tcctccggcctgtcctcctcaggcccttcctcctcaggcccttcctcaggcctgtgctcc
tccggcctggcctcctccggcctctcctcaggcctggcctcctgcctatcctcctcaggc
ccgtcctcctcaggcctgtcttcgggcctctcctcgggcctgtcctcctcgggcctgtcc
tcctcgggcctgtcctcctcgggcctgtccttctcgggcctgtcctcctccggcctgtcc
tcctcgggcctgtcctcctcgggcctgtcctcctcgggcctgtcctcctccggcttgtcc
tcctcggtcccttcctcctgcggcctttcctggccgccgccgcccggctgtgggcggggg
gtgggtggttgcggggcggcccccgccgtgcggcccccgcggccgcggaccggggacgtg
ttgccggcggagcccgccgacttcggggcgctgctgctgtcgcggccggtgctggagggg
ctgcgggcggcgggcttccagcgcccttcccccgtccagctccaggccatcccgctggga
cgctgcggcctcgatctgatcgtccaagccaagtcaggcacaggaaaaacctgtgtgttc
tccactgtggcgttggactctctgatactcgaaaatccctcaactcagatcctggtattg
gctcctactagagagattgcagtgcagattcattcagtaatcaccgccattggaatcaag
atggaaggcttggaatgccatgtcttcattggaggaacccctttatctcaagacaaatcc
aggctcaaaaagtgccatatagcagttggctctccaggtagaataaagcagctgatagaa
cttgactacctgaacacagccagtatccgtctttttattcttgatgaggcagacaaactt
cttgaagaaggcagcttccaagaacaaataaattggatttattcctctctgcctgccaac
aaacagatgctcgcggtatcggctacttatccggagttcttggctaatgctttgaccagg
tacatgagagatcctacgtttgtgaggttgaactcctctgacccaagtctcattggtctg
aagcagtattataaagtagtgaattctcatcccttgccccataagacttttgaggagaaa
accgagcatttgcaggaactgtttagccaaattcctnttaatcaagccttggtcttctct
aatctgcacagcagggctcagcatctggctgatatcttgacctccaaaggttttccggct
gagtgcatttcaggcagcatgaatcagaaccagcgcctggatgccatggctaagcttaag
cagttccactgcagagttctcatttcaacagacttgacttcccgaggaattgatgcagag
aaggtgaatctggttgtgaatttagacgttccagtggactgggagacctacatgcatcgg
attggccgagctggccgcttcggtactttaggactggctgtgacctactgttgccgtggc
gaggaagagaacgtaatgatgaccatagcccagaaatgtaacctgaacctcttctgtttg
ccagacccgatccctgctggcttgatggaagaatgtttggagtgggatgtggaagtcaaa
gccgctgagccctcagcaaggccggtgagcgctcctaggcttcctcttgagaaagcagct
ctgaaaccagatcgagagaggccaagagcggtgcagagccatgcagctcccccagaccct
gccgcttctcctgcaatcacagcaaagtcaaaaagatccaaaccaaaactctccaggaaa
gaccctggcaactggctgcacccagaacaagcagagcccccaaactctgctcaacccctg
ggcccagggaccaaggcccttcagacttctggacagagcggcagtagtaagccccaaggc
aaagaagcatcccaaagcccgctccccaaaatcccctgtctctcctcctttaaagcccag
ctcccctccaagacttggacttttgccgaattggtggaggactatgaacactttattaaa
gaagggctagagaagcacgtccaagtcatcagacattacactgggcctgaggagcagacc
ggacccccccaaaacggtccggcggaacggcgagagtctgaggacggcgagcgggctccg
gtgagccaggtccagtccgagtattccgatagcgagggcgattcctacagctccggggct
tcctcctcctgcaaaggcaatgagtctcacttagaaggctcttccgacagccaggcgcaa
gaggacgggcgggacgtggaccccggggattggatcctgccaagccaaggtccaaaggta
cgggccacccccgggccagagccagagggaccacctcaaatccacactcgtcgtttgggg
aaggggcagtcggccaaacagagtgccaagcgcagccggaagagagtcgcccagcggtcc
ccctgcccgttccagcgagaactccgagaagagagttgggatgactgtcccggggaccgt
gccgccgacaggctccgtggctttgggtctgaccctcagagttacgagaattactggaga
tcttactatcaggcgtggcagcattactacatgtcagcgtctcacctgtactctcgaaac
ttgcagaggcactccaattggatgacagcatatcacatgaacgccgtgtatctccaggaa
ttgatgcggggggacctgtaa
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