Ornithorhynchus anatinus (platypus): 100077465
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Entry
100077465 CDS
T01045
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100077465 (DDX60)
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100077465 (DDX60)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100077465 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
DUF6827
ArAE_2_N
Motif
Other DBs
NCBI-GeneID:
100077465
NCBI-ProteinID:
XP_028932654
Ensembl:
ENSOANG00000007454
LinkDB
All DBs
Position
12:10988600..11069063
Genome browser
AA seq
1828 aa
AA seq
DB search
MQEDAHAVRGGGDQEVKFRVGYEAKSLACKESEENVTQSHPEDIKKAVEPVTDLQKELPE
KGMKKKKAKGTQAIADHAASTKQIGKERSKKTKMKTKVKGTAEEEGGKGGGGRKQKTGGE
GGGGAGSKACSEFLNELSEIILNEIPKAEYSSLLADFVESEYFLFDGDSLLLSCICEKSL
VLGQNLHFFYLVERYLTDLINKGAQFVIIFFQDTEKVYFKFPQLLLLRTTLILHLKHNTA
IDVRTEFSSCLSPEWKYFLEEKYPYFLIIADNGLNDLQTNLLNISIIQAWSMKVNVVLIS
DQASDTIRVYGHILQSMHKHHIFFAKNRAKMKEVYQSLMNEMEDCSDAELVHLFGGLRRK
TIEQEAWEIAERFQCLWPEGIDVRRNLCITSCSLALRMYHSYRLGKTEMEESEELTLEEV
ADLCRMHCLSVACLLHLPLVQRAQMRVVTSRWTEPIDSFLNTKHWCEFFALKTMTFLNFS
TLRTDGKYLPDLSDHLLLKSIAYYFEVENSQGLQLELGKAIQKDYECLWDSISVLVDQID
VERTFPLRTTTKCFLQKSKTPIKEPSDEKMPNLGFIPVTSSVLDAFAGDILKGLSFLSSK
DPVVTSLVKLKEFDELKHWHSGKRLSDDYDRTRCNLEENSNDPHFLRRKVKFRAYQQFYG
QTLEAVTPKVIVTQPAKPTKGYDQTKNSKRSNESKQSVIVRENQKRLDALKEQKEKDQWI
AQSVGIIRAIEDNFSLGVSKLDEFLKKCKSDSVKFNAERVGLTYCLKAWKRHCKKEGKIS
KDLSIAAQVMRRLQSLVYKYDEFLKKKDCELIVKCLKYLGFDNLLDFKDFSQEVEDDRTV
KKKAKYSVDMGSARFQLLHMGHFLMRNERTDPDPRVQDFIPDTWQRELLDVVDNNESAVI
VAPTSSGKTYASYYCMERVLKESDEGVAVYVAPTKALVNQVSATVQNRFTKKLPVGQALC
GTFTRDYRQDVLNCQVLVTVPACLEILLLSPHRQAWVKRIRYVIFDEVHCLGGEIGAEVW
EHLLVMIRCPFLALSATISNPGHLTRWLQSVKTYWQNADRIIDGSLHSDLASRCGSKVQK
KLSEAKRSYKVRLVLYGERYNHLEKYVCSFKGDDIVTDHYHPCAALTTDHIKVHGFPSDL
TLSPQESLQLYDMMVSVWEKWPHAQQLDPEEFQHFKDKVAISRADAQKYEASLKKELKKW
IEHGHTEKVREVLNNLKPNCVPCSQEMAVNFPLLVEKLRKMDKLPALFFIFKITDVELRA
NEVYKSLEVKQEEQQSPKAEKEVSNLDQRLKKVTKSIEKQPKIPPKHISKADQLLVQEAE
YQQLLQKLEKLKKIPEDCTYANLKAIKNQTLYKVFHQVKFTYKSEELQTLALRGIGYHHG
ALNFRGRQLVEILFREGLIKVVTATGTLALGINMPCKSVVFAQNSIFLDALNYRQMSGRA
GRRGQDLKGSVFFYNIPLPKIEKLIKSNVPKLRGHFPLGISLVLRLMLLASKGDDRKDAE
AKVLSVLKHSLLTFSRPRAMEMLKIFFLFSLQFLVKEGYLDRECNPMGFAGLVSHLHYHE
PANFLLVSFLVKGLLHKLCKPIKKGSSVFSEDVMEKLMLILANLFGRKYILAKYFEAKRK
FQQSKVFLEDLPKDFEAAVFEYNVKIKNDFCTFIRIVSKLADMKQEYQLPLSKIDFTDEI
YADSELLSHLMSCKEGRTAISPFVCLSGYTDRDLLHSDSLSSVVLQSVGVNDSLVPLLDL
KKSDSRGRRMPLNAYALDFYKHGSITALSEDNGLHRGEVFLLLRDFLLTIQSISISLSEL
CEKEDDDVVLAFKQLSSSFKAKLDKVSD
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggacgctcatgctgtccggggaggtggtgaccaggaagtaaaattcagagtg
gggtacgaagctaagagtttagcatgtaaagagtcagaggaaaatgtcacccaaagtcac
cctgaggatatcaagaaggctgtggagcctgtgaccgatctccagaaggagctgccagag
aaaggaatgaagaaaaaaaaagcgaaagggacccaggcaatagctgatcatgcagcgtcc
acaaaacaaattggaaaagagaggagcaagaagaccaaaatgaaaacaaaagtgaaagga
actgcagaagaagaaggtggaaaaggaggaggaggaagaaagcaaaaaacaggaggagaa
ggaggaggaggagcaggatcaaaagcctgttctgaatttctgaatgaattatcagagatc
attttaaatgaaataccaaaagctgaatattccagtttgctcgctgactttgtagaatct
gaatattttctgttcgatggagattctctactcctctcctgcatatgtgaaaaatcactg
gtgctaggacagaaccttcacttcttctatttagtcgaacgctatttgacggacttaata
aacaaaggagcccaatttgtcattattttcttccaggatactgaaaaagtatatttcaag
tttcctcagctgcttcttctaagaacaactttaattctgcacctgaagcacaataccgcc
attgacgtccggacggagttttccagctgtttatccccggagtggaaatatttcttggaa
gaaaaatacccgtattttttaataattgcagataacggcctaaatgacctacagacaaac
ctcttaaacatctctatcattcaggcctggtcaatgaaagtcaatgttgttcttatctca
gatcaagcatcggacacaatccgagtttatggacacattcttcagagtatgcacaaacac
cacatttttttcgcaaagaacagagcaaagatgaaagaagtttatcagtcactgatgaat
gaaatggaagattgcagtgatgctgaattagtccatctctttggaggactgagaaggaag
actatagagcaagaggcatgggaaatagcagaacggttccagtgtctttggcctgaagga
atcgacgttcgacgtaacctctgtatcacttcatgttcgttggctttgagaatgtaccac
agctaccgcttagggaagacagagatggaggagtccgaagagttaaccttggaggaagta
gccgacctgtgcaggatgcactgcctcagtgtggcttgtctccttcatctgcctctcgtg
caaagggcccagatgcgtgtcgtcacttctagatggactgagccaatagactcctttttg
aacacgaaacactggtgtgaatttttcgctttaaaaacgatgacatttttgaacttttcc
actttaagaacggatggaaagtaccttcccgacttaagtgatcatcttcttttgaagagt
attgcctattactttgaagtcgaaaatagccaaggcctgcaattagagctcggaaaagca
attcagaaggattatgagtgtctgtgggattcgatatcagtgttagttgaccagattgat
gttgaaagaacatttcctcttcgaacaacgacaaaatgttttcttcaaaagtcaaaaact
ccaataaaagaaccatctgatgaaaagatgcccaacctgggttttattccagtgacatct
tccgtgctagacgcattcgctggagacattctgaaaggtctttctttcttaagcagcaaa
gatccagtcgtcacttcactcgtgaagctaaaggaatttgatgaactcaagcactggcat
tcaggcaaacgacttagtgatgattatgacagaacaagatgtaacctggaagaaaacagc
aacgatcctcattttctcaggaggaaggtaaagtttcgggcctatcaacagttttatgga
caaaccttggaagctgtcactccaaaagtcattgtaactcaacctgcaaagcccacgaaa
ggttacgatcaaaccaagaacagcaaaagatccaatgaatcaaaacaaagcgtcattgtc
agagaaaatcagaaaaggttggatgctctaaaggagcaaaaggaaaaggaccagtggatt
gcccaatctgtaggcatcataagggccattgaagataattttagtttgggagtaagtaaa
ctggatgagttcctgaagaagtgtaagagtgattcggtgaaatttaatgcagaaagagtc
gggctgacttactgtctgaaagcgtggaaaagacactgcaaaaaagaaggtaaaatatca
aaagatctaagtatagctgcccaagtgatgagaagacttcagtccctagtgtacaaatat
gatgaatttttgaagaaaaaagattgtgaacttatagtcaaatgccttaaatatttagga
tttgataatttgttggattttaaggatttttctcaggaggtggaagatgacaggactgta
aagaaaaaagccaagtactctgttgatatgggttcagcacgattccagctcctgcacatg
ggccatttcttgatgcgaaatgagagaacagatccagaccccagggtccaggatttcatt
ccagacacatggcagcgagagcttctcgacgtggtggataacaatgagtctgcagtgatc
gttgccccaacgtcttcggggaaaacatacgcctcctactactgcatggagagagtgctg
aaagagagcgatgaaggggtggccgtatatgtggcgcctacgaaggcccttgtgaaccaa
gtgtcagcaactgttcagaatcgattcactaaaaaactgcccgtaggtcaagctctgtgt
ggaactttcaccagggattatcgccaggatgtgctgaactgccaggtactcgtgacagtg
ccagcctgtttggaaatccttctgctctctccccatcgtcaagcatgggtgaaaagaatc
agatacgttatatttgatgaggtccattgtcttggtggggaaattggagcagaagtttgg
gagcacctccttgttatgatccgatgcccttttttagctctctctgctactatcagtaac
ccgggacacctcactaggtggctccaatctgtcaaaacatattggcaaaacgcagatcgg
ataatagatggaagtctccattctgacctggcttctagatgtggctccaaagttcaaaaa
aaattatctgaagcaaagagatcatacaaagttagattggttctgtacggcgagagatac
aatcatttggaaaaatacgtctgctcctttaaaggtgatgacatcgtcacggatcactat
catccatgtgctgccctcaccacagatcatattaaagtccatggatttccttcagatctt
actctttctccacaagaaagcctccagctttatgacatgatggttagcgtttgggagaaa
tggcctcatgcccagcaattagatccggaagaatttcaacattttaaagataaagtagca
atctcaagggcagatgcccagaaatatgaagcaagtctaaagaaggaactcaaaaaatgg
attgaacatggtcatacagagaaggtcagagaggtactgaataatttgaaacctaactgt
gttccttgttcgcaagaaatggcagttaacttcccacttcttgttgaaaaactaaggaaa
atggacaaattgcctgctctgttcttcatttttaaaataacagatgtggaactgagggct
aatgaagtatacaagtctctggaggtgaagcaggaagaacagcagtctcccaaggctgag
aaagaggtctctaacctagaccaaagactgaaaaaagtgacaaaatccattgagaaacag
cccaaaatacctccaaaacacatctcgaaagcggatcaactcctggtacaagaagccgag
tatcagcagttgctccagaagctggagaagctgaaaaagatccccgaagactgtacttac
gccaacctaaaggctatcaaaaatcagactttgtataaagtgtttcaccaagtgaaattc
acatataaaagtgaagaactgcaaactttggcactgaggggcattggttaccatcacggt
gctctgaatttcagaggaagacagctggttgagatactcttcagggaggggttgatcaag
gtagtgacagctacggggacgcttgcattaggaatcaatatgccgtgcaaatctgtcgtt
ttcgctcaaaattcaatcttcttggatgctttgaactacagacagatgtcagggcgtgca
ggaaggcgaggccaagacctgaaaggaagtgtgtttttctataatattccactgcccaaa
atagaaaaactcattaaatccaacgtccctaagctaagaggccacttcccgctgggcata
tccctggttcttcgcctcatgctgttggcttccaaaggagatgatcgaaaggatgcagaa
gcaaaggttttatcagtgctgaagcattccctgctgactttcagccgacccagagccatg
gagatgttgaaaatattcttcttgttttctttgcagtttctcgttaaagagggctattta
gaccgagaatgtaatcccatgggttttgctggacttgtatcacatttgcattaccatgaa
ccggctaattttctcctggtcagttttctggtgaaaggcttattacacaaactctgcaaa
ccaatcaagaaaggctcttcagtgttttctgaagatgtgatggaaaagctaatgctgata
ctggcaaacttgtttggaaggaaatacattctagccaagtattttgaagctaaaagaaaa
tttcagcagtcaaaggtgtttcttgaagatctccccaaggattttgaagcagccgtattt
gagtacaacgtaaaaataaaaaacgacttttgcacttttatacggattgtttccaaactg
gctgacatgaagcaggagtaccaactccccttgtcaaaaatagatttcacggatgaaatt
tacgcggattctgaacttttgtctcacttgatgagctgcaaagaggggaggacagccatt
tcacccttcgtgtgcctatccgggtacacggatcgtgatttacttcactcggattctctc
agcagtgtggtactgcaatcagttggtgttaatgactcccttgttcctctcctggactta
aagaaatctgacagtagaggaagaagaatgccacttaacgcatatgcacttgacttttac
aagcacggatcgataacggcattgtcagaagacaatgggttgcatagaggagaagttttc
cttctcctgagagattttttgctcaccatacaatctatcagcatctctctgagtgaactg
tgtgaaaaagaagacgatgacgtggtcctcgcctttaaacagctgagtagtagcttcaaa
gcaaaactggataaagtcagtgactaa
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integrated database retrieval system
