KEGG   Ornithorhynchus anatinus (platypus): 100077980
Entry
100077980         CDS       T01045                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03013  Nucleocytoplasmic transport
oaa04141  Protein processing in endoplasmic reticulum
oaa04150  mTOR signaling pathway
oaa05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100077980 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100077980 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100077980 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100077980 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaa03019]
    100077980 (SEC13)
   04131 Membrane trafficking [BR:oaa04131]
    100077980 (SEC13)
Messenger RNA biogenesis [BR:oaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100077980 (SEC13)
Membrane trafficking [BR:oaa04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100077980 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100077980 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100077980 (SEC13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_EML MIOS_WD40
Other DBs
NCBI-GeneID: 100077980
NCBI-ProteinID: XP_001509095
Ensembl: ENSOANG00000009346
UniProt: F7GBF8
LinkDB
Position
X1:complement(54495182..54510422)
AA seq 321 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNVLSSCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGEGQWEIKKISNAHTIGCNAVSWAPAVIPGSLVDQPSGHKPHFIK
KFASGGCDNLIKLWKEEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDEASGSTWNPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWMCI
SDVNKGQGAVSAITDGQQNEQ
NT seq 966 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacacggtggacacctcccatgaggacatgattcatgatgctcag
atggactactatggcacccgattggccacctgctcatcagatagatccgtcaaaatattt
gatgtgcggaacggagggcagatcctcatcgctgatctgaggggtcacgaaggccctgtg
tggcaagtagcctgggctcacccaatgtatggaaacgtcttatcttcctgttcttatgac
cggaaggtcattatatggaaggaagaaaatggcacttgggaaaagacttatgagtatacg
ggacatgactcttcagtgaactctgtatgctgggccccacatgactatgggttgatcctt
gcttgtggcagctccgatggggccatctcgctgctgagttacaccggcgagggacagtgg
gaaatcaaaaagatcagcaatgctcacaccattggctgcaatgctgtcagctgggcacct
gctgttatccccggtagcctggtagaccagccgtccggacacaagccacatttcatcaag
aagtttgcatcaggtggctgtgacaatctgatcaagctgtggaaagaggaggaggatggc
cagtggaaggaagatcagaaactggaggctcacagtgactgggtccgggatgttgcctgg
gctccctccataggcctgccaacaagcaccattgccagttgctcccaggatggccgagtg
ttcatctggacctgcgacgaggcctccggaagcacgtggaaccccaaactgctgcacaaa
ttcaatgacgtggtgtggcacgtgagctggtccatcacggccaacatcctggccgtctct
ggaggggataataaagtcactctttggaaggaatctgtagatggacagtggatgtgcatc
agcgatgtcaacaagggccaaggcgcggtgtctgctatcacagatggccagcagaacgag
cagtga

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