Ornithorhynchus anatinus (platypus): 100078424
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Entry
100078424 CDS
T01045
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03013
Nucleocytoplasmic transport
oaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100078424 (SRRM1)
03015 mRNA surveillance pathway
100078424 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100078424 (SRRM1)
03041 Spliceosome [BR:
oaa03041
]
100078424 (SRRM1)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100078424 (SRRM1)
Spliceosome [BR:
oaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100078424 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
100078424
NCBI-ProteinID:
XP_028936186
Ensembl:
ENSOANG00000002202
LinkDB
All DBs
Position
16:43289496..43320139
Genome browser
AA seq
926 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKREKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSASPAPEKKEATPELPEPSLKAKEPSIQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRPPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRPSSPPRKARRLTPSASPPRRRRQPSPPASPPPKARRSPTPQQS
NRTRKSRGSASPGRTSGKVTKHKVPEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSPSRSPSPSPRKRQKDS
SPRMQMGKRWQSPMIKSSRRRRSPSPPQARRRRSPSPAPPPRRRRSPTPPRRRSPSPPPR
RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPKQRSPPP
SKRRSPSLSSKHRKGSPPSKSSREARSPPPNKRHSPSPRPRAAHPSSSPPPPPPPPRRGP
SSSPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPVAKKH
QAPPSPTQSRSPSTNWSPAVPAKKAKSPVPSPSPARNSDQEGGGKKKKKKKDKKHKKDKK
HKKHKKHKKEKAAATATVVAAPAAAAAAAAAAVAAVSTSVQEEQEAEAEPKKETESEAED
NLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcgggacgagtgcagaacaggacaatcgtttcagcaacaaa
cagaagaagcttttgaagcagctgaaatttgcagaatgtctcgaaaaaaaggtagacatg
agcaaagtaaacctggaagtgataaagccttggataacaaaacgagtaacagaaatcctt
gggttcgaagatgatgtagtaattgaatttatattcaaccagctggaagtaaagaatccg
gattccaaaatgatgcagatcaacctgactgggttcttgaatgggaaaaatgctagagaa
tttatgggagagctgtggccccttctgttgagtgcccaagaaaacatcgccgggatcccc
tctgctttcttggaactgaagaaagaggaaataaagcaaagacagattgagcaggagaaa
ttggcatcgatgaagaaacaagatgaagacaaggacaagagagaaaaagaagaaaaagag
agcagcagagaaaagagggagcggtcgaggagtccaagaagacgcaaatcgagatctcct
tcccctagaagacggtcctccccagtaaggcgagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcgcttcccccgccccggaaaagaaagaggccact
ccagagctcccagaaccctctctgaaagccaaggaaccgtctattcaagaggccacgtcc
actagtgacatcctcaaagcccccaaacccgaacccgtcccagaaccgaaggaaccttct
cccgagaagaattcaaagaaagagaaagaaaaggagaaaacccgcccccggtcccgatcc
cgatccaaatcgaggtcacggactcgttcccggtccccctcccatacccggcccaggcgg
cggcaccgatcacgatccaggtcctattcccccagaaggcggccgagtcctagaaggcgg
ccctctcctcgaagaagaacccctccgagacgcccgcctcccccaccgaggcatagaaga
agcagatctccagtgaggcggagaaggcggtcgtcggcctccctgtcggggagcagctcg
tcgtcgtcttcctcccggtcccggtcccctcccaagaagccgcccaaaaggccatccagc
cccccccgcaaagctcgccggctgactccttcggcgagccccccgaggcggaggcgccag
ccgtcaccccccgccagcccgccgcccaaagcccgccgctcgccgacaccccagcagtct
aaccgaacgaggaaaagccggggctccgcctctccggggagaacctcaggaaaagtgaca
aagcataaagttcctgaaaaaagagagtcgccgtcaccagcaccaaaacctaggaaagta
gagttgtcagagtcagaagaagacaaaggcagcaaaatggcagcagcagattcagtgcaa
cagaggcgccagtacagaaggcaaaaccagcagtcttcatcggactctggctcctcctcc
tcctcggaagaggagcgaccaaagaggtcgaatgtgaaaaacggcgaagtgggtaggcgg
cgacgacattcaccttcccggagcccgtctccgtcgcctcggaaacgccaaaaagattcc
tccccacggatgcagatgggaaagagatggcaatcgccaatgattaaaagtagtaggcgg
cggcgaagtccatccccaccccaggcccggaggcggcgctctccttctcccgcccctccc
cctcggcggcgtaggtcaccgacaccccctcggcgcaggtctccctctcctcccccacgc
cggcgctctccttctccgagaagatactctcccccgatccagaggagatactccccctcc
ccgcctccgaagagaaggacggcgtcccccccgccgcctcccaagcggagggcgtcgccg
tctccgccgcccaagcggcgcgtctcccactccccaccgaagcagagaagcccccctccc
tcaaagagacgttccccctcgctctcgtccaagcataggaaaggctcccccccgagcaag
tcctcccgggaagcccggtccccgcccccaaacaaacggcattccccctcgccccggcct
cgggcggctcacccctcctcgagccccccgccgccgccgccgccgcctcgcaggggaccc
tcgtcctcgccccaaagaaggcagtccccgtctcccagcaccaggcccatccgcagagtc
tccaggaccccagaacccaaaaagacaaaaaaggccgcttccccgagcccccaatccgtg
agaagggtgtcgtcctccaggtcggtgtccggatcccccgagccagtggccaaaaagcac
caagcacctccatctccgacccagtctcggtctccgtcgacaaactggtccccggcagtg
cctgcaaaaaaggctaaaagtcccgtcccgagcccgtccccagcaaggaattccgaccaa
gaaggcggcgggaagaagaagaagaagaagaaggacaagaaacacaaaaaggataaaaag
cacaagaagcacaaaaagcataagaaggaaaaggccgcggcgacggcaaccgtagtggcc
gcccctgccgccgctgccgccgccgccgccgccgccgttgctgccgtcagcacgtcagtc
caggaagaacaggaggcagaagcagagcccaaaaaggagacggaaagcgaagcggaggat
aacctcgacgacttagagaaacacctgcgggagaaggccctcaggtcgatgaggaaggcc
caagtgtcacccccgtcttag
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