Ornithorhynchus anatinus (platypus): 100078427
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Entry
100078427 CDS
T01045
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04360
Axon guidance
oaa04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100078427 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100078427 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oaa04040
]
100078427 (TRPC4)
Ion channels [BR:
oaa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100078427 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100078427
NCBI-ProteinID:
XP_007666733
Ensembl:
ENSOANG00000015506
LinkDB
All DBs
Position
20:complement(5938092..6053134)
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AA seq
978 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIK
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVALLKYSQRLKRDEWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETGGLNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYFLRWTWRHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKLATLQPSKVVKEPLNPLDPDDR
SDGGGGGKAANKKNFSLFDITSLIHPRSAAIASETHPISNGSALLGPETAKEKQKKVNFV
TDIKHFGLFHRRSKPNSGEAQANKIYSVSEEVSRQQADQQCEKNTQLEAEDLAVKCELSL
AGLAERSVSTDAKRDNPETVDLQGGGTPCLLEPEELMVKAAEPDPVKENPDQEGDGNRDA
DLKISETIVHEDYVTTRL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaaacgtgaacgcaccctatcgagaccgcatccctctt
cgcatagtccgagccgagtccgagctctcgccctcggaaaaggcctacctgaacgccgtg
gagaaaggtgattacgccagcgtgaagaaatccctggaggaagccgagatctatttcaaa
atcaatatcaattgcatcgaccccttgggacgcacggctctcctcatagccattgaaaac
gagaacctcgaactcatcgaactgctcttaagcttcaacgtatatgttggagatgccctg
ttacatgctatcaggaaggaagtagtaggagctgttgaactgctcttaaatcacaagaag
cccagcggagagaaacaggttcctccaatcctcctggataaacagttctcggaattcacc
cctgacatcacccccatcatcttggcggcccacaccaataactacgagatcataaagctg
cttgtgcagaagggggtgtcggtccccaggccccacgaggtccgctgcaactgcgtggag
tgcgtgtccagctcggacgtggacagcctgcgccactcacgctcccggctcaacatctac
aaggccctggccagcccgtcgctcatcgccttgtccagcgaggaccccttcctcaccgcc
tttcagctgagctgggagctccaggagctgagcaaggtggagaacgagttcaagtcggaa
tacgaagagctgtcccggcagtgcaagcagttcgccaaggatctgctggaccagacccgc
agctccagggagctggagatcatcctcaactaccgggatgacaacagcctgatcgaagaa
cagagcggaaacgatctcgcccggctgaagctggcgattaagtatcggcagaaagagttc
gtggcccagccgaattgccagcagctgctcgcctcccgctggtacgacgagtttccgggc
tggaggagacggcactgggcggtgaagatgttgacgtgtgtggtcataggactccttttt
cccgtcttctccgtctgctacctgatagctcccaaaagccccctcggactcttcatcaag
aagccgttcatcaagtttatctgccacaccgcatcctacttgacttttttgtttctactc
ttgctggcctcccagcacatcgacaggtcagacctgaacatgcagggaccgccgcccacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggtgaaattaaacag
atgtgggatggcggactgcaagattacatccacgactggtggaacctgatggattttgta
atgaactccttatacttggcaacaatctctttgaaaattgttgcacttttaaagtatagt
cagaggctcaaacgggatgagtgggacatgtggcaccccaccctggtagctgaggcttta
tttgctattgcaaacatcttcagttccctgcgcctgatctcattgttcactgcaaattct
cacctgggacctctgcagatctctctaggacgaatgttactggacattttgaagtttcta
ttcatatactgtctcgtgttgctagcttttgccaatggcctcaaccagttgtacttctat
tatgaaacaggtggcctaaataactgcaaaggaattcggtgcgaaaagcagaataatgcg
ttttccacgttattcgaaacactgcagtccctcttttggtctatatttgggctcatcaac
ctgtacgtgaccaatgtcaaagcccagcacgaatttaccgagttcgtcggcgctaccatg
tttggaacctataacgtcatctcgctggttgttctgctcaacatgctcattgccatgatg
aataactcctaccagctgattgctgatcacgcggacatcgaatggaagtttgcccgaacc
aagctgtggatgagttactttgaggaaggagggaccctgcccactcccttcaacgtcatc
ccgagccccaagtcgctgtggtactttctcaggtggacgtggaggcacctgtgcaagaag
aagatgaggcggaaacccgaaagctttggaaccatagggaggcgagcggctgacaatttg
aggagacatcaccaataccaggaagttatgaggaacctcgtgaagagatatgttgcggca
atgattcgcgatgccaaaactgaagaaggcctgacagaagaaaactttaaggagttaaaa
caagacatttctagctttcgctttgaagtcctcggattattaaaaggaaacaaactggca
actctccaaccctccaaggtcgttaaggaacctctgaatcccctggatcctgatgacaga
agtgacggcggtggtggtggtaaggcagccaataaaaagaatttcagccttttcgacata
accagcctgattcacccaaggtcagccgccatcgcctcggagacacaccctataagcaac
ggatcggccctgctgggtcccgagaccgccaaggagaaacaaaagaaagtgaacttcgta
acggacatcaagcacttcgggttgtttcacagacgctccaaacccaactctggagaggca
caggcgaataaaatctactctgtttccgaagaagtctcccgccaacaggccgaccaacaa
tgtgagaaaaacactcaactggaagcagaagacttggccgtgaaatgtgaattaagcctc
gccggactcgccgagcggagcgtgtcgacggacgctaagcgagataacccagagacggtg
gatttacaggggggcgggactccttgcctattggagccagaggagctgatggttaaagcc
gcagagccagacccagttaaggagaatccggaccaggaaggagacggtaacagagacgct
gacctgaagatctcggagacaatcgttcacgaagattacgtgacaaccagattgtga
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