Ornithorhynchus anatinus (platypus): 100078495
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Entry
100078495 CDS
T01045
Symbol
SMG8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100078495 (SMG8)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100078495 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
100078495
NCBI-ProteinID:
XP_028938347
Ensembl:
ENSOANG00000008508
LinkDB
All DBs
Position
17:11833865..11839363
Genome browser
AA seq
965 aa
AA seq
DB search
MAGPVSLRALLLGGAAGGAEPPWREDEICVVGIFGKTALRLGSEKQALVNTVCDRQVFPL
FGRGEEEEEEEEEKKAEAEEGGGGGGDAGPPPGPPPGPRDYNLVQAYYHQESKVLYLVLT
SVCDNWQLVRACRALRGGEAGGGPALPHAEAHDFWKQQEKLQCLSLLYLFSVCHILLLVH
PTCSFDVTYDRVFRALDGLRQKALPLLKAAIKDCPVGKEWKLNCRPCPPRLLFLFQLNGA
LKVDPPRGQDPAHPDRPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSVNCLFTVPANQA
FVYIVPGGREEDPVGLLLDRLRTHCAAKDAEAPPGPAALAGPRRYQASRPPARPPPAFHA
EGGAPACCSSSSSSSSSGQPVDFTLREFLWQHVELVLGKKGFDDSVGRNPQPSHFELPTY
HRWIAAASKLYEVAVDGGEEDLASPAAELTSKVLSGVKVLEGFLDIDTKFSENRCQKALP
MAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYALQLHEDCYKFWSNGHQL
CEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFD
IKAANYDFYQLLEEKCCGKLDHINFPIFEPSTPDPAPAKNESSPVPPDGEAEKLKEKEPQ
TQGESTSLSLALSLGQSTDSLGTYPPDPQAGGDNPESHGQEAKPEKRPNPIDRQASTVEY
LPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNFHTGLDQQGFIPGTNYLMPWDIVIKTRS
EDEGDLDTNSWPAPNKAIPAKRSAVVMGRGRRRDDLARAFVGFEYEDSRGRRFMCSGPDK
VMKVMGSGPKESALKALNSDMPLYILSSSQGRGLKPHYAQLMRLFVVVPDAPLQIILTPQ
VQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYAYVTERGPCFPPKESLQLMSYKVIRGVL
KAVTQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccccgtcagcctgcgggccctgctgctgggcggcgcggcgggcggcgcggag
cccccgtggcgggaggacgagatctgcgtggtgggcatcttcggcaagacggcgctgcgg
ctgggctccgagaagcaggcgctggtcaacaccgtctgcgaccggcaggtcttccccctc
ttcggccgcggcgaggaggaggaggaggaggaggaggagaagaaggcggaggccgaggag
ggcggcggcggcggcggcgacgccgggcccccccccgggccgccccccgggccccgggac
tacaacctggtccaggcctactaccaccaggagagcaaggtcctctacctcgtcctgacg
tcggtgtgcgacaactggcagctggtccgggcctgccgagccctgcgcggcggggaggcc
ggcggcggccccgccctgccccacgccgaggcccacgacttctggaagcagcaggagaag
ctgcagtgcctcagcctcctctacctcttctccgtctgccacatcctgctgctggtgcac
cccacctgctccttcgacgtcacctacgaccgggtgttccgcgccctggacgggctgcgg
cagaaggcgctgcccctgctcaaggcggccatcaaggactgccccgtgggcaaggagtgg
aagctcaactgtcggccctgcccgcccaggctcctcttcctcttccagctcaacggggcc
ctcaaggtcgaccccccccggggccaggacccggcccacccggaccggcccaagaagcac
tcgcccaagcgccggctgcagcacgccctcgaggaccagatctaccgcatcttccgcaag
agcagggtgctgaccaaccagagcgtcaactgcctcttcaccgtccccgccaaccaggcc
ttcgtctacatcgtccccgggggccgggaggaggacccggtgggcctgctgctcgaccgg
ctgcggacccactgcgcggccaaggacgccgaggccccgccgggccccgccgccctggcc
gggccccgccgctaccaggcgtcgaggccgcccgcccgcccgccgccggccttccacgcg
gagggcggcgccccggcctgctgctcctcctcctcgtcgtcctcctcctcgggccagccg
gtggacttcaccctccgcgagttcctctggcagcacgtcgagctggtcctcggcaagaag
ggcttcgacgacagcgtgggcaggaacccgcagccctcccacttcgagctccccacctac
cacaggtggatcgcggccgcctcgaagctctacgaggtggccgtggacggcggggaggag
gacctcgcctctcccgccgcggagctgacgtccaaggtcctgagcggcgtcaaggtgctg
gaggggtttttggatatcgacaccaagttctccgagaatcggtgccagaaggccctgccc
atggcgcacagcgcctaccagtccaacctgccccataactacaccatgaccgtccacaag
aaccagctggctcaggccctgcgggtgtacagccagcacgccaggggcccggcctttcat
aagtacgccctgcagctgcacgaggactgctacaaattctggagcaacggccaccagctc
tgtgaggagaggagtctgaccgaccagcactgtgtacacaagtttcactcgctccccaaa
tcaggagaaaaaccagaggcggaccgaaaccctcccgtgctgtaccataacagtcgggct
cgttctacgggtgcctgcaactgtggaaggaagcaagcaccgagggatgacccctttgat
atcaaagcagctaattatgacttttatcagcttctcgaagagaagtgctgtggaaaattg
gatcatatcaactttccgatctttgagccaagtaccccagatcccgctcccgccaagaat
gaatcttcaccggtgcctccggacggagaggctgaaaaactgaaagaaaaagagcctcag
acccaaggagagagcaccagcctgagtctagcgttaagtctcggtcagtccacggatagt
ttaggcacttacccgcctgaccctcaggctggaggagacaaccccgagagtcacgggcag
gaagcgaagcctgagaagcggccgaacccgatcgaccgccaggcttccactgtggagtat
ctgccaggcatgctacattcaaactgccccaaggggcttctccccaagttctccagctgg
tctttggtcaaactaggccccgctaaatcgtataacttccacacgggcttagatcaacag
ggctttatcccggggacgaactacctgatgccttgggacatcgtcatcaagaccagatcg
gaagacgagggcgacttggacaccaactcctggccagccccgaacaaggccatcccggca
aagagaagcgccgtggtgatggggaggggaaggcggcgagacgacctagcccgagctttc
gtggggttcgagtacgaagactcacgcgggcggaggttcatgtgttccgggccggacaaa
gtgatgaaggtgatgggcagcgggccgaaggaatcggcgttgaaggccctcaacagcgac
atgcctctctacatcctgtcatcctctcaggggcgaggactgaaaccccattacgctcag
ctgatgagactctttgtcgtggtccccgacgctcctctccagatcattctaacgcctcag
gttcaaccaggccctccaccctgcccagtattctaccctgagaaacaagaaatcactctt
ccaccagatggcctctgggtactacggttcccttatgcttacgtgactgagcgcggacct
tgctttcctccaaaggaaagcctgcaattaatgagttacaaggtgattcgcggggtgctt
aaggcagtgacgcagtga
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