Ornithorhynchus anatinus (platypus): 100078883
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Entry
100078883 CDS
T01045
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oaa03009
]
100078883
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100078883
Ribosome biogenesis [BR:
oaa03009
]
Eukaryotic type
Pre-60S particles
Helicases
100078883
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100078883
NCBI-ProteinID:
XP_039770297
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All DBs
Position
16:19759628..19761270
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AA seq
546 aa
AA seq
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MIEAFGAAVEDEPLGFEHMGLDLRLLQANTDLGWSRPTLIQEKAIPLALEGKDLLARART
SSRKTAAYAVPLLQHLLHRKETGPVVEQAVQGLILVPTKXAQQAQTMIRQLAAYCAPDVW
VVNVSAVKDSATQRALLMEKPDVVVGTPSRVHSHLQQGGLVRRDSLELLVMDEANLLFSY
GFEEELKSLLCQLPRIYQAFLMSANFNEDVQALKELVLHNLVTLXLQESQLPGPERLQQF
QVLCEAEEDKFLLLYALLKLRLLRGKLLLFVNTVERSYRLRLFLEQFSIPACMLNGELPL
RSRCHIISQFNQGFYNCIIATDGVIRCERARRGERASDPEAGVARGINFHNVAAVLNFDL
PPSPEAYVHRAGRMARADNPDTTLTFVLPAEHPQLARIEEILGGESAEPVLQNYQFRMEE
IEGFRYRCQDAMHSVTKQAIREARLKEIKEELLHSEKLKMYFEDNLRDLQLLRHDQPLHP
DVVKLHLSHVLDYLIPPTLRGIARPHSRRKCKRPLSSQKGFETHRPKNPLRTFKYTGKKS
PAAKPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccttcggagcagccgtggaggacgagccgctgggcttcgagcacatgggt
ttggatctgcggctcctccaggccaacacggacctgggctggtccagacccacactgatc
caggagaaggccatcccactggccctggaaggcaaggacctgctggcccgggcccgcacc
agctccaggaagaccgcggcctatgccgtgcccctgctccagcacctgctgcaccggaag
gagacggggcctgtggtggagcaggccgtgcaggggcttatactggtgcccaccaagnng
gcccagcaggcccagactatgatccggcagctggcggcctactgtgcccccgacgtgtgg
gtggtcaacgtgtccgccgtcaaggactccgcgacccagagggccctgctgatggagaag
ccagacgtggtggtggggaccccatcgcgtgtgcacagccacctgcaacagggcggcctg
gtccggcgggactccctggagctgctggtgatggacgaggccaacctgctcttttcctac
ggctttgaggaggaactcaagagcttgctctgccagctgccccgaatctaccaagccttc
ctaatgtcggctaacttcaatgaggacgtgcaagctctcaaggagctggtcctgcacaat
ctggtgacgctantgctgcaagagtcacagctgccgggcccggagcgtctacagcagttc
caggtgctgtgtgaggcggaggaggacaagtttctcttgctttatgccctgctgaagctg
aggctgcttcgggggaagttgctgctgttcgtcaacaccgtggaacggagctaccgcctc
cgcctcttcctcgagcagttcagcatccccgcctgcatgctcaatggcgagctgcctctg
cgctctaggtgccacatcatctcccagttcaaccagggcttctacaactgcatcattgcg
acagatggggtgattcgctgtgagcgagcccgcagaggagaaagggcttcggatccggag
gcgggggtggcccgcggcatcaactttcacaatgtggcagccgtgctcaactttgacctg
ccaccctcccctgaggcctacgtgcaccgagcgggcaggatggcgcgcgccgacaaccca
gacacaaccctgaccttcgtgctgcccgcagagcacccgcagctggcacggatcgaggag
attctcggaggagagagcgcggagcccgtcctgcaaaactatcagttccgcatggaggag
atcgagggattccgctaccgctgccaggacgccatgcattctgtgacgaagcaggccatc
cgtgaggctcggctgaaggagatcaaagaggagctgctccactcggagaaactcaagatg
tacttcgaagacaacctgcgggacctgcagcttctgcgccacgatcagcccctgcaccca
gatgtggtgaagctgcacctcagccacgtcctcgactacctgatccccccgactttgcgt
ggcatcgcccgcccccacagcaggcggaaatgcaagaggcctttgtcttcccagaagggc
ttcgagactcacaggcccaagaaccctctccgcaccttcaagtataccgggaagaaatcc
cccgcagccaaaccttcctga
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