Ornithorhynchus anatinus (platypus): 100079488
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Entry
100079488 CDS
T01045
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100079488 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oaa03036
]
100079488 (DICER1)
Chromosome and associated proteins [BR:
oaa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100079488 (DICER1)
microRNA pathway
RISC loading complex
100079488 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100079488
NCBI-ProteinID:
XP_028926941
Ensembl:
ENSOANG00000012034
UniProt:
F7DMW3
LinkDB
All DBs
Position
1:complement(55202649..55279270)
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDLNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEISASWTKEKWNQEFTQHQVLVMTCHVALNVLKNDYLSLSDINLLVFDECHLA
ILDHPYREIMKICENYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSSAETATDL
VVLDRYSSQPCEIVVDCGPYADKSGLYEILLKELDEALNFLNDCNITVLSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADSDKIVTFEEDLKTYKAIEKILRNKCSKSVDPGETE
TEPVVDDDDIFPPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
STFYSTLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVNDSSTLDIDFKFMDDI
EKSEARTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIDAGV
GVQSLPADFRYPNLDFGWKKSIDSKSFISIPNSSLAENENDCKHSTILVPENAAHQGANK
TSSEENHDQMSVNYRIPLNESPSKLQIEVSTDLSAINGISYNKSLANGNCDLVNKDFCQE
NQLNYFKQEIPIQPATSYPMQNLYSSENQPKPSNECTLPSNKYLDGNVNKSTSDGCPEMA
VTTSTLEVVDASKDPIVSERSPSNEYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNPDKWEKDEQTKDSMLANGKLDDDFDEEEDEDLMWRLPKEEADYEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSNYEWKMPKKAALGNVQFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDTGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWESTLSPSTQSFNDQPRNLLTNY
APASTTNTQSSFYKDMEYGCLKIPPRCMFDHPDAEKTLIHLISGFENFERKINYNFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcaggactacagctcatgacccctgct
tcctccccaatgggtcctttttttggacttccatggcaacaagaagcaattcatgataac
atatacacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataataca
atagtctgtttaaacactggctcagggaagacatttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatctcaacaaaaatgggaaaaggactgtatttttggtc
aactctgcaaaccaagttgctcagcaagtatcagctgtcagaacccattcagatctcaag
gtgggagaatattcaagcttagaaataagtgcatcttggacaaaagaaaaatggaaccaa
gagtttacccaacatcaggttctagttatgacctgtcatgtcgctttgaatgttttgaaa
aatgattacctatccttatcagacataaaccttttggtgttcgatgaatgtcatcttgca
atcttagaccacccctatcgagaaattatgaagatctgtgaaaattatccatcatgtcct
cgaattctgggactaactgcatccattttaaatgggaaatgtgatccagcggagttggag
gagaagattcagaaactggagaaaatccttaagagcagtgctgaaactgcaactgatttg
gtggttttagacagatactcttctcagccatgtgagattgtagtagattgtggaccatat
gctgataaaagcggactctatgaaatactgctaaaggaattggatgaagcacttaatttt
ctcaatgactgcaacataactgtactttctaaagaacgagattctacattaatttctaaa
cagatactgtcagactgtcgagcagttttggtggtgctgggaccttggtgtgcagataag
gtagctggtatgatggtaagagaactacagaagtatatcaaacacgagcaagaggagctg
cacagaaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtgatcaaactg
cttgaaatactgcgcaagtataaaccatttgagcggcagcagtttgaaagtgttgagtgg
tataacaataggaaccaagataactatgtttcttggagcgattccgaagatgatgacgag
gatgaggaaattgaagaaaaagagaagccagagacaaattttccttctccatttactaac
attttatgtggaattatttttgtggagagaagatacacggcagtggttttaaacagattg
ataaaggaagctggcaaacaagatccagaactggcttatatcagcagcaattttataact
ggccatggcattggaaagaatcaacctcgaaacaaacagatggaagtggaatttagaaaa
caggaagaggtgcttaggaaatttcgagcacacgagaccaacttactcattgcaactagt
atagtagaagagggagttgacataccaaaatgcaacttggtggttcgttttgatttgccc
acagagtaccgctcttacgtgcagtccaaaggaagagctagggcaccgatctccaattac
atcatgttagcagactcagacaaaatcgtaacttttgaagaagatctcaaaacctacaaa
gctattgaaaagatcttaagaaacaagtgctccaagtcagtcgatcctggggaaaccgaa
acagaaccggtggtggatgatgatgacattttcccaccctatgtgctcagaccagatgat
ggcagtccaagagtcaccattaacacggctataggacacatcaatagatactgcgctaga
ttaccaagtgatccatttactcatctagctccaaaatgtaaaacaagagaacttcctgat
agtacattttactcaaccctttatctgccaattaactcaccgctccgagcctcgattgtg
ggtcctccaatgagctgtacaagactggcagagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttaatgccagttggaaaagagactgtt
aagtacgaggaggagcttgatttacacgatgaagaagaaaccagtgttccagggagacct
ggctccaccaaacgaaggcagtgctacccgaaagcaattccagagtgcttgcggaatagt
tatcccaaacctgatcaaccctgttatctatatgtaataggaatggtgttaactacacct
ttacctgacgaactcaactttagaaggcgaaaactgtatcctcctgaggataccacaaga
tgttttggaatactgacagccaaacctatacctcagattcctcattttcctgtgtatact
cgctctggagaggttaccatatctattgagttgaagaaatctggtttcactttgtcattg
caaatgctcgagctgatcacaagactccaccaatacattttctcacatattcttcggctt
gaaaaacctgcactagaattcaaacccacagaagctgattcagcctactgtgttctacct
cttaatgtcgttaatgactccagcactttggacattgactttaaattcatggacgatata
gaaaagtcggaagctcgtacaggcattcccagtacacagtatacaaaagaaacacctttt
attttcaagctagaggattatcaggatgcagttatcattccaaggtatcgcaattttgat
cagcctcatcgattttatgtagctgatgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
acccctcgccatttaaatcagaagggaaaagctcttccattaagcagtgctgagaaaagg
aaagccaaatgggaaagtctgcagaataagcagatcctggttccagagctctgtgctatc
catccaattccagcgtcactgtggaggaaagcagtctgcctccccagtatactttatcgc
ctgcactgcctgttgaccgccgaggaactgagagcccagacggccatcgatgctggggta
ggggttcagtcacttcctgccgatttcagatatcccaacttggactttgggtggaaaaaa
tctattgacagcaaatccttcatctcaattcctaactcctctttagctgaaaatgaaaat
gactgtaagcacagcacaattttagtccctgaaaatgctgcacatcaaggtgctaataaa
acctcctctgaagaaaatcatgaccagatgtctgtgaactacagaataccgctcaacgag
tcacccagtaaactccaaattgaagtctcgacagacctttcagcaattaatggtatttct
tacaataaaagtcttgccaatggcaattgtgatttagttaacaaagacttttgccaagaa
aatcaactcaattacttcaagcaggaaatacctatacaaccagctacctcatatccgatg
cagaatttatacagtagtgagaaccagcccaagcccagcaatgaatgtactctaccgagt
aataaataccttgatggaaatgttaacaaatctacctcagatggatgccccgagatggca
gtgaccaccagtactttagaagttgtcgatgcgtcgaaagatccaattgtctctgaacgt
agcccttccaatgaatactcctcaaaaaccctcggtcccaatcctggtctcattcttcag
gccctgaccctttcgaatgctagtgatggatttaacctagagcgacttgaaatgctcggt
gactcctttttaaagcacgccatcactacgtacctgttttgcacttaccccgatgctcac
gagggacgcctgtcgtatatgcgaagcaaaaaagtcagcaactgtaatctgtatcgactt
gggaagaagaaagggctgcctagtcgcatggttgtgtccatttttgacccccctgtcaac
tggctgcctcccggttacattgtaaatcaagacaagagcaatcctgataaatgggaaaaa
gacgagcagacaaaagacagcatgttggctaatggaaaactggatgatgattttgatgag
gaagaggacgaagacttgatgtggaggctcccaaaggaggaagctgattacgaagatgac
tttttggagtacgatcaggaacatatcaagtttatagataatatgttgatgggatcgggc
gcttttgtgaagaaaatttctctctctcccttttcaaccactgattctaattacgaatgg
aaaatgcccaaaaaggcggccctgggtaatgtacagttttcatccgattttgatgatttt
gactacagctcttgggatgcaatgtgctatctggatcctagcaaagctgtcgaggaggac
gattttgtggtaggcttctggaatccctccgaagaaaactgtggcatcgacacaggaaaa
cagtcgatctcttacgacttgcatacggagcagtgcatcgccgacaagagcattgcagac
tgtgtggaggctttgctgggttgctacttgaccagctgcggcgagagagctgctcagctt
tttctctgttccttgggcctgaaggttctcccggtaattaagaagactgagtgggagagc
actctgagccctagcacgcagagtttcaacgatcaaccaaggaatctgctgacaaactat
gcccccgcctccacaaccaacacgcagtcttctttctataaagacatggaatacggttgc
ctgaagattccaccgaggtgcatgtttgatcatccggatgcagaaaaaacattgattcac
cttatatcgggctttgaaaactttgaaagaaaaatcaactacaatttcaagaacaaggct
tatcttctccaggcatttactcacgcctcctaccactacaataccattactgattgttac
cagcgcttggaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcagcactccccaggagttctaactgacttgcgatctgctctggtcaat
aacaccatctttgcgtcattagctgttaagtatgactaccacaaatacttcaaagctgtc
tctccagagctattccatgtcattgatgactttgtgcagtttcagcttgaaaagaatgaa
atgcaaggaatggattctgagcttagaagatccgaagaggatgaggaaaaagaagaagat
atagaagtcccaaaggccatgggggatatattcgagtcacttgctggtgccatctatatg
gacagtggaatgtcactagaaatggtttggcaagtgtactatccgatgatgcggccactg
atagaaaaattttctgcaaatgtgccccgttccccagttcgagagttgctagaaatggaa
ccagaaaccgccaaatttagtcccgcagagagaacttacgacgggaaggtcagagtaacc
gtggaagtggtaggaaagggaaagtttaaaggtgttggccgaagctacaggattgccaag
tccgcagctgcgagacgagcactacgaagcctcaaagcaaaccaacctcaggttccaaac
agctga
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integrated database retrieval system
