Ornithorhynchus anatinus (platypus): 100080271
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Entry
100080271 CDS
T01045
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100080271 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oaa03041
]
100080271 (PRPF40B)
Spliceosome [BR:
oaa03041
]
Complex A
U1 snRNP components
U1 related factors
100080271 (PRPF40B)
Complex B
100080271 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
DTW
Motif
Other DBs
NCBI-GeneID:
100080271
NCBI-ProteinID:
XP_039769328
LinkDB
All DBs
Position
10:54400668..54410064
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AA seq
869 aa
AA seq
DB search
MPPPPPPPGIPPPFPPMALPPLPQRPPAVPPGMMPPMIPPLGGPPPLAQMPGLGPPLIPG
MLVPPGPPGPAPVPVPAVTAPGADTAGCESPGWGRAGQGRDAVGAGAGGAPPKPPWSERL
PPDGRVYYFGVDSERGPWDVPGARRTKAELPAQGPWREFRSDTGRPYYYNTQSRESCWAR
PPDLDQLEALIKQEEAVGKQPQPPAQPEPSPAAAPSPTVSPEPPVRPEPAQPDACEPPDR
AEPPDDGARPPEEASSSDSGRRDDEEPRPEPEPEPERPGANWNCKEKAKQAFKDLLREKG
VTSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKETLQ
RFLERHSRMTSGTRYRRAEQTFGDLEVWAVVPERDRKEIYDDVLFFLAKKEKEQAKQLRR
RNIQALKRILDGMSSVSFDTTWAEAQQHLLDDPRFTQDRDLQTDMDKEDALICFEEHIRL
LEKEEEEERERVRLRERRQQRKNREDFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFA
NMLGQPGSTPLDLFKFYVEDLKARFHDEKKIIKDVLRDRGFGVEVNTTFEDFAHVISFDK
RAATLDAGNIKLTFNSLLEKAEAREREREKEAARRLRRREAAFRGMLRQAAPPLEPGTSW
DQVRERFVCDFAFEQITLESERIRLFREFLQVLESECLPISKSRKHSRKAKKHHHKRPPH
SPSGSESEEDDLPPPPPKRRKRNPSESGSEPSSSPGSAESGGAGPGPRGLPFGRVPPGAD
HGSRKSKKQKKKSKRKRHKSNSPESEAEREPEQEEREREARRGEPQPRSPARRGVKKEKT
GWDTSESELSEGELERRRRTLLRQLDDQP
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgccgccgcccgggatccccccgcccttccctccgatggcgctgccc
ccgctgccccagaggccgccggccgtgcccccgggcatgatgccgcccatgatcccgccc
ctgggaggacccccccctctggctcagatgccggggctgggcccccccctgatcccgggg
atgctggtgcccccagggcccccaggacctgctcccgtcccggtccccgcagtgacggct
ccgggcgcggacacggccggctgtgagtcccctgggtggggcagggcagggcagggcagg
gacgctgtcggggccggggccgggggggcccccccgaagcccccgtggagcgagcggctg
ccccccgacggccgcgtgtactacttcggcgtggacagcgagcgcggtccgtgggatgtc
cccggggcccgtcggaccaaggccgagctgccggcccagggcccgtggagagagttccgc
tcggacacggggcgcccgtattactacaacacgcagagccgggagtcctgctgggcccgg
cccccggacctggaccagctggaggctctgatcaaacaagaggaggcggtggggaaacag
ccgcagcctccggcccagcccgaaccgtcccccgccgccgcccccagccccacggtgtcc
cccgaacctcccgtgcgccccgagcccgcccagccggacgcctgtgagcccccagaccgg
gcggagccgccggacgacggggcccggccaccagaggaggccagcagcagcgacagcggg
cggcgggatgacgaggagcctcggccggagccggagccggagccggagcggcccggggct
aactggaactgtaaggagaaggccaagcaagccttcaaggacctgctgcgagaaaagggc
gtgacctccaacgcctcatgggagcaggccatgaagatggtggtgactgatccccgctac
agcgccctgccaaagctgagcgagaagaagcaggcgttcaacgcctacaaggcgcagcgc
gagaaggaggagaaggaggaggcccggctgagggccaaggaggccaaggaaaccctgcag
cgcttcctggagcggcacagccgcatgacctcgggcacccgctaccggcgggcggagcag
acgttcggggatctggaggtctgggctgtggtgcccgagcgagaccgcaaggagatttac
gacgatgtgctcttcttcctcgccaagaaggagaaggagcaggccaagcagctcaggcgg
cgaaacatccaggccctgaagcgcatcctggacggaatgagcagcgtcagttttgacacc
acgtgggccgaggcacagcagcacctcctggacgacccccgcttcactcaggatcgcgat
ctgcagacagacatggacaaggaggatgcgctgatctgcttcgaggagcacatccgcctg
ctggagaaagaggaggaggaggagcgggagcgagtgcgtctgagagagcggcggcagcag
cgcaagaaccgcgaagacttccagaccttcctggacgagctgcacgagacggggcagctg
cactccatgtccacctggatggagctgtacccagcggtcagcaccgatgtccgctttgcc
aacatgctgggacagccgggctccacccccctggacctcttcaagttttacgtggaggac
ctgaaggcccgattccacgacgagaagaagatcatcaaggacgtcctgcgggaccggggt
ttcggcgtggaggtcaacacgacgttcgaggacttcgcccacgtcatcagcttcgacaag
cgggcggccacgctggacgccggaaacatcaagctgaccttcaacagtttgctggagaag
gcagaggcgcgggagcgggagcgggagaaggaggcggcgcggcggctgcggcggcgggag
gcggcgttcaggggcatgttgaggcaggcggcccctccgctggagcccggcaccagctgg
gatcaggtccgcgagcgctttgtgtgcgacttcgccttcgagcagatcacgttggagtcc
gagcggatccgcctcttccgggagttcctgcaggtgctggagagcgagtgcctacccatc
tccaagagtcgcaagcacagccggaaggccaagaaacaccaccacaagcgtcctccacac
tccccttcgggctctgagtccgaggaggacgacctgcccccgccgccccccaaacggcgg
aagcggaacccctccgagtcgggctccgagccctcgtcctcccccgggtcggccgagagc
gggggggccggcccggggccccggggtctccccttcggccgcgtccccccgggagcagat
cacggttcccgaaaatccaagaaacagaaaaagaaaagcaagagaaagaggcataagtcg
aacagcccggagagtgaggcggagcgagagccggagcaggaagagcgagagcgggaggcc
cggcggggggagccccagccccgctccccggcccgccggggggtcaagaaggaaaagaca
ggctgggacacgtcggagagcgagctgagcgagggggagctggagcgccggcgccggacc
ctcctgcggcagctggatgaccagccgtga
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