Ornithorhynchus anatinus (platypus): 100080363
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Entry
100080363 CDS
T01045
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X2
KO
K13191
RNA-binding protein 16
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100080363 (SCAF8)
03041 Spliceosome [BR:
oaa03041
]
100080363 (SCAF8)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100080363 (SCAF8)
Spliceosome [BR:
oaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100080363 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100080363
NCBI-ProteinID:
XP_028908130
Ensembl:
ENSOANG00000014230
UniProt:
A0A6I8P9N1
LinkDB
All DBs
Position
2:70520744..70715448
Genome browser
AA seq
1273 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPCTTATMSNNTPGTPVTPVTPANVVQGLPDPWV
SQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVPFNKKLMDRYDFGEDSEHSEEPKKETPTSQHSHVSESVNNSI
FHQLAEQLQQQNLEHLRQQLLEQQQPQKVVTQDSQEGTFGSEHSASPSQGSSQQQFPEPE
TNLDDTMDIQQQDMDIDEGQDGAEEEVFEQEEKKVAVRSRSRTHSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKLDDLEGFAEGGMIDQETVNSDW
ETVKSSETVKETVPTTQSTTVEKTTVVTTQTETYTQPVAMLQIPVTPTVPAVNLVPPTFP
VSMSVPPPGYSAIPPPPFLRASFNPSQPPPGFMPPPVPPPVGPPPTIPPVVPTSLVQPPL
SITSETLKDVPYSSLVLPVGSVSSSLVTQTLTAGSVFNPPSHQTEADEKGSHLPDHQISS
SECTRSVIHNDVSSSSGILGGQLPNVSSSSGILGAQLPSVSSSSGILGAQAPNVSSSSGI
LGAQAPPNVPNNSGILGVQPPNVSSSSGLLGLPPPNISSSSGLLGIQPPNVPSSSGLLGA
QMPTGAQNMPHLNIATQRMPGIPILDIRPGLIPQSPGPRFPLIQPGIPAQRGIPPPTILD
PSLHPPPRGPFPPGDIFSPAERPFINPARQNLDSLSNPEKRLSLGSETIQQEGDRDYRFP
PVENRESLNRPPPVDVRDVAGRPVDPREGAGRPPIEGREHFGRPHIEMRENLTRPGLDNL
GRRDHFAFNADKPWVPRGDFDEREHRVLPLYGGPKAFHEDRSRFRHANFRFDPRSGPIWN
RGFGQDTHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRFGRDRLQNSWVPPPHPRAFDY
FEGAASQRKADNVPQINGENTETDTQPPAVPVPNDPELFEKITSSSEIKKEKNDTEADIE
NDPVVESTETEGT
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaacagcgagctatactcgctaaatgactacaaaccacct
atttccaaggctaaaatgacacagattaccaaggcagcaatcaaggctattaagttctat
aagcatgtggttcagagtgttgagaagttcattcagaagtgtaaaccagaatacaaagtg
cctggactttatgttattgattccatcgtgcgacaatcccggcatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaacaacatcatcagtactttccagaatttatat
cgatgtcctggcgatgacaagagtaaaatagtcagagttctaaatttgtggcagaagaac
aatgtttttaagagtgaaattattcagcctcttctggatatggcagcgggcattccacct
ccagtcgtcacccctgtcttaccttgtactacagccacaatgagcaacaataccccagga
actcctgtgacccctgttaccccagccaacgttgtgcaaggcttacctgatccatgggtg
tctcagataaccaatacggatacgcttgctgccgtggcccagatcttgcagagccctcaa
ggtcaacagcttcagcagttaattcagacgctccagatacagcaacagaagccccagcct
tccttactccaggccctggatgctggtctggttgttcagctgcaggccttgacagcgcaa
cttacagctgcagctgcagcagctaatacactcaacccactagaacagagtgttcctttt
aacaagaagctgatggacaggtatgactttggagaagattctgaacatagcgaagagcct
aaaaaggaaacccctacttctcagcactctcatgtttcagaatcagtgaacaactcaatt
tttcatcaattagctgaacaattgcaacagcaaaatcttgagcatcttcgacaacagctc
ctagagcaacaacagcctcaaaaggtagtaactcaggacagtcaggaaggaacattcggt
tcagagcattctgcttcaccatctcaggggagtagccaacagcagtttcctgaaccagaa
acaaacctagatgatacaatggatattcagcaacaggatatggatatagatgaagggcaa
gatggagctgaagaagaggtttttgaacaagaagaaaagaaagttgctgttcgttctaga
tcaaggacacactcaagatctcgttcaagatcaccaagaaaacgaaggtccaggtcccgg
tctggttctcgaaaacgcaagcacagaaagcgatcacgctcacgatcaagagaaaggaag
agaaagtcatcacgatcatactctagtgaaaggagagctagagaaagggagaaagaaaga
caaaaaaaaggattgccccctatacgatctaaaacactaagtgtctgtagcactactctc
tgggttggccaagtcgacaagaaagcgacacaacaagatttaaccaatctgtttgaagaa
tttggacagatcgaatctattaatatgattcctcccaggggctgtgcctatgtctgcatg
gtacatagacaagatgcctatcgggctcttcagaaacttagttctgggtcttataaaatt
gggtccaaagttattaagattgcttgggccttaaacaaaggtgtaaaaacagaatacaaa
cagttctgggatgtggatcttggagtaacatatataccatgggaaaaagtaaaattggat
gatctagaaggctttgctgaaggaggaatgattgatcaagaaactgttaatagtgattgg
gaaactgtgaagagctcagagactgtcaaagagactgtccctactactcaaagtacaaca
gttgaaaagactacagtggtaacaacacagacagagacatacactcagcctgttgctatg
ctgcagattccagtcactccaactgtacctgctgtgaatttagtgccacccacatttcct
gtgtcaatgtcagttcctccacctggatacagtgcaatcccaccacctccttttttgcga
gcaagtttcaacccttcacagccacctcctggtttcatgcctcctccagttccaccacct
gttgggccaccacctactattccaccagttgtaccaacatctttagtgcaacccccacta
tctattacttcggagacgctgaaagatgttccttacagtagccttgttttaccagttggt
tcggtttctagcagtttggtaactcagaccttgacagctggaagtgtttttaatcctcca
agtcaccaaacggaagcagatgagaaagggtcacatctcccagaccatcagatttcttct
agtgaatgcactagatcagtgattcacaatgatgtttcgagtagctctggaattctggga
gggcagctgccaaatgtgtctagcagttctggaattttgggagcccagctaccatccgtg
tccagcagttctggaatcctgggagcacaggcaccaaatgtgtccagcagttctggaatt
ctgggagcacaggcaccaccaaatgttccaaataattctggaatcctgggagtacagcca
ccaaatgtctcaagtagctctggattacttgggctgcctccaccaaatatttctagtagt
tcaggacttctgggaattcagccaccaaatgttccaagtagttctggacttcttggagcc
cagatgccaactggggctcagaatatgcctcatttaaatattgctactcaaagaatgccc
gggataccaattctagatattcgtccaggactaattccacagtcccctggaccaagattt
ccattgattcagcctggaattccagcccagcgaggcattcctcctccaacaattcttgac
ccatctcttcatccacccccccgtggtcctttcccgccaggagatattttcagtccggct
gagagaccgttcataaatcctgccaggcagaatctcgatagtctctctaatcccgagaaa
aggctgtcccttgggagcgagactatccaacaggaaggagatcgagattatcgctttcct
ccggtagaaaacagggagagcctcaataggccaccgccagtggatgttagagatgtagca
ggtcggcccgtagatccaagagaaggtgctgggaggcctcctatagagggaagggaacat
tttggaagaccgcatatagagatgagagagaatctcacaagaccggggctagataatctc
gggcgaagagatcattttgctttcaatgcagacaagccctgggtgcctagaggagatttt
gatgagagggagcatcgggtgctccctctctatggtggtccaaaggccttccatgaagac
cgaagtagatttcgtcatgcaaacttcagatttgatccaagaagtggtcccatttggaac
agaggatttggccaagatactcacagagattttgatgaccgcagaagaccatgggaaaga
cagagggatagggatgacagagattttgatttctgcagagaaatgaatgggaatcgcttt
ggaagagacagactgcagaacagctgggtcccccctccacatccacgggcttttgattat
tttgaaggggccgcttctcagcgcaaggccgataacgtgccccagataaatggcgaaaac
actgagacagacactcaacctccagctgtgccagtgccgaacgatcctgaactttttgaa
aaaatcacatcttcaagtgagataaagaaagagaagaatgacacagaagctgatatagaa
aatgacccagtggtagaaagcacagaaactgaggggacataa
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