Ornithorhynchus anatinus (platypus): 100080908
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Entry
100080908 CDS
T01045
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X3
KO
K12586
exosome complex component RRP43
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100080908 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100080908 (EXOSC8)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100080908 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100080908
NCBI-ProteinID:
XP_001511768
Ensembl:
ENSOANG00000015500
UniProt:
F6Y0S4
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All DBs
Position
20:5687135..5694661
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GVKAEFTAPPGDAPNKGYVVPNVDLPPLCSSRFRPGPPGEEAQVASQFINDVIENSQLIA
KEDLCISKGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPAVVINEETGLAEVN
FKQKTPLNIRAYPIATSFAIFDNTILIVDPTGEEENLATGTLTVVMDEEGKLCCLHKPGG
SALAGTKLQDCLSRAVTRHKEVKVLMDEVIQSVKPT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcttcaagactgtggaaccattggaatattacaggaggtttttgaaagag
aactgtcggcccgatggaagggaacttggtgaattcagaactactactgtcaatataggt
tccatctccaccgccgatggttctgcgttagtgaagctgggcaacacgaccgtcatctgt
ggagtgaaagcggagtttacagcacccccgggagatgcacccaacaaaggatacgttgtt
cctaatgtggatctcccacccctgtgttcatcaagatttcgccctggacctcctggggaa
gaggcccaagtggctagccagtttatcaacgacgtcattgaaaactcacagctgatagcc
aaggaagatttgtgtatttccaaaggaaagcttgcatgggttctctactgtgatctaatt
tgcctcgattacgacgggaacattttggatgcctgcacgttcgctttgttagcagcctta
aaaaatgtacaactgccagcagttgtgatcaatgaagaaacgggcttggcagaagtgaat
ttcaaacagaagactcctctcaacattagagcatatccaatcgctacatcatttgctata
tttgataacacaatactcatagttgatccaactggggaggaggagaatttggcaactgga
actctaacagttgtaatggatgaagaagggaaactgtgctgtcttcacaaaccaggtggc
agtgccctggcgggaaccaagcttcaggactgtctaagccgggccgtgaccagacacaaa
gaagtgaaggtgttgatggatgaagtcatacaaagtgtgaaaccaacataa
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