Ornithorhynchus anatinus (platypus): 100081206
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Entry
100081206 CDS
T01045
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100081206 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100081206 (POLR1A)
Enzymes [BR:
oaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100081206 (POLR1A)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100081206 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
E1_4HB
Motif
Other DBs
NCBI-GeneID:
100081206
NCBI-ProteinID:
XP_028939306
Ensembl:
ENSOANG00000012384
LinkDB
All DBs
Position
18:complement(27089819..27157210)
Genome browser
AA seq
1729 aa
AA seq
DB search
MLVFKDVPWRRLQGVSFGMYSAEEIRKLSVKSITNPRYVDNVGNPAPNGLYDLSLGPADN
REVCSTCVQDFQNCPGHLGHINLPLIVYNPLFFEKLFLLIRGSCLNCHLLTCPRSVIHLL
LCQLRVLDVGALQGVYELEATLSRFLEENPNASAVEIQDELEECTREVLGNDPLGSQGSQ
VKNVCESKRTLIAHFWKSNMTSKRCPHCKTGRSLVRKEHNSKLTVTYPGVAHRKSKKSKE
SEKDSEKNQEKTQPSLAIDDAQLGRRGYLTPSTARDHIVALWENEGFFLNHLFSRIDITE
NVEAGFNPEMFFLDLVVVPPSRYRPISRLGDQMFTNGQTVNLQAVMKDVELIQKLLALMA
QEKKLSQETVESASEKESEEPEESLVPMDRSFLGLIPGQSLTDKLYNIWIRLQSHVNIVF
DSEMDKLMTEKYPGVRQILEKKDGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPLVF
ATKLTYPQPVTPWNVQELRQAVINGPGTHPGASMVINEDGTRTALSSSNASQREAVAKQL
LTPTTGGPKHQGMKVVYRHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANC
KAYNADFDGDEMNAHFPQSELGRAEANVLACTDEQYLVPKDGQPLAGLIQDHMVAGAGMT
TRGCFFTREQYMELVYRGLTDKVGRVKTFPPAILKPYPLWTGKQIISTLLINVIPENHLA
LNLSGKAKINGKAWMKESLRATPGFNPETMCESQVIIREGELLCGVLDKAHYGSSAYGLV
HCCYEVYGGETSGKVLTCLARLFTAYLQLYKGFTMGVEDILVKPQADIKRHAVIEESTLC
GPRAVRAAFNLPETASQEEVQGRWQDAHLSQDQQYFNMVDLKFKEEVNHYSNEINKACMP
FGLHRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYD
VTPRSGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQ
YDLTVRDSDGSVIQFLYGEDGLDIPKTQFLQSKQFPFLANNYEVIKKSKHLDEVLSKMDP
QQAHQHFRALRRWQSKHVASPPREGAFLNFSQKIQAAVKALNLSGSSKNGRDPTAQEILK
MWYELDEKSQKKYQKRVVPCPDPCLAVWRPDIYFASVSETFEDEVDAYAREWAAENENGF
LNTGLSPESLRTLLHLKWQRALCDPGEAVGLLAGQSIGEPSTQMTLNTFHFAGRGEMNVT
LGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKKLKKQLTRVCLGEVVQKIDIQES
FCTEGKMNKFRLFQIRFHFLPPEDYQQEKCLKPEDILHFMENRFFKLLTETIKRKSNKLT
SFNLVNSRRAKQRDLDTDGDAPASQENFDNDKEEEGPIVDGEAEEGDADATDKKHKDKQE
EEVDYESEEEEYAESDNNEDEREDEEGDGEEEQDNEAGLLLEGDGQAPSSLGHIGGRRAG
SQADQMAELRIQAVKNIHPSIQDYAYDPVEGLWCEVTLKLPLMKVHFDLCSLVVSLAQHV
VVYETKGITRCLLNDTTKKNGERELVLNTEGINLPELFKYASALDLQRLYSNDIHAMANT
YGIEAALRVIEKEIKDVFAVYGIQVDPRHLSLVADYMCFEGVYKPLNRYGIQSNSSPLQQ
MTFETSFKFLKQATMMGAQDELRSPSACLVVGKVVKGGTGLFDLKQPLR
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgttcaaggatgtgccctggcggcggctgcagggcgtctcctttgggatgtac
tcggccgaggaaatcaggaaattaagtgtgaaatccatcaccaacccccgctacgtggac
aacgtggggaaccccgcgccgaacgggctctacgatttgtctctggggccagccgacaac
agggaggtgtgctccacctgcgtgcaggacttccagaactgccccggacacctgggccac
atcaacctgcccctgatagtctacaaccccctcttcttcgaaaaactcttcctcctgatc
cgcggctcctgcttgaactgccacctgctgacatgccctcgctccgtgatccacctcctg
ctctgccagctgcgggtcctggacgtgggggccctccagggggtctacgaactggaggcc
accctcagccggtttttagaagaaaaccctaatgcttccgccgtcgagattcaggacgaa
ttggaggagtgcacgagggaggtattgggcaacgacccgctgggatcccagggctcgcaa
gtgaaaaacgtgtgcgagagcaagagaacgctgatcgcccatttctggaagtcgaacatg
acctccaagcggtgccctcactgcaaaactgggaggtcgctggtgcgaaaagaacacaac
agcaagctgacggtcacctacccgggagtggcccacaggaagtccaagaaatccaaggag
tcagaaaaggattcggagaagaaccaggagaagacccaaccgtcgttagctatcgatgac
gctcaactgggaagacgaggctacctgacccccagcactgcccgagaccacatcgtggcc
ctgtgggagaacgaaggtttctttctgaatcacctcttctcaagaattgatatcacagag
aatgtagaggcgggcttcaacccggaaatgttcttcttagacctcgtggtggtcccgccg
tccaggtatcgccccatcagtcgtctaggggaccagatgtttaccaacggtcagacggtc
aacttgcaagccgtcatgaaggacgtggaattgatccagaagcttctggctctgatggcc
caagaaaagaagctttctcaagagacggtggagtcggcaagcgaaaaggagtcagaggag
cccgaggagtccttggtcccaatggatcggtcgttcctggggttgatcccgggacagtcg
ctcacggacaaactctacaacatttggatccgcctgcagagccacgtgaatatcgtattt
gacagtgaaatggacaagttaatgacagaaaagtatcccggcgtccggcagatcctggag
aagaaagacggcctgttccgaaagcacatgatggggaagcgcgtggactacgccgcccgc
tcggtcatctgcccggacatgtacatcagcaccaacgagatcgggatacccctggtattt
gccaccaagctgacctacccgcagccggtcacgccttggaatgtccaggagctgaggcag
gcggtcatcaacggtcccggcacccaccccggggcctccatggtcatcaacgaggacggg
acccggacggccctgagctccagcaacgcgtcccagcgggaggccgtggccaaacagctc
ctcacccccaccaccggcggcccgaagcaccagggcatgaaagtggtttaccgccacgtg
aagaacggggacgtgctgttgctgaaccgccagcccaccctgcacagaccgtccatccaa
gcccaccgagcccggatcctgcccggagagaaggtgctcaggctgcactacgccaactgc
aaagcctacaacgccgacttcgacggcgacgagatgaacgcccacttcccccagagcgag
ctgggccgcgccgaagccaacgtcctggcctgcacggatgagcagtacctcgtccctaag
gatggccaacctctagcggggttgatccaggaccacatggtagccggagcgggcatgacc
acgcgaggctgcttcttcaccagggagcagtatatggaactggtgtaccgggggctgacc
gacaaggtgggacgcgtgaagaccttccctcctgctatcctgaagccgtatcccctgtgg
accgggaagcagatcatctctacgttgctgatcaacgtaatccccgaaaatcacctcgcg
ctgaatttgtcagggaaggcgaagatcaacgggaaggcctggatgaaggaaagtctccga
gccactcctggcttcaaccccgagaccatgtgcgagtcccaggtgatcatcagagaaggg
gagctgctctgcggggtgctggataaagctcactacggcagctcggcctacggcctggtt
cactgctgctacgaagtgtacgggggcgaaaccagcggcaaagtgctcacctgcctggct
cgcctctttaccgcctacttgcagctctacaagggtttcaccatgggcgtggaagacatt
ttggtcaaacctcaagccgacatcaagagacacgcggtcattgaagagtcgaccctctgt
ggccccagggctgtcagagcggcgtttaacctgccggaaacagcgtcgcaggaggaagtc
caagggcggtggcaagatgcccatctctcccaagatcagcagtatttcaacatggtggac
ctgaagttcaaggaggaagtgaaccattacagcaatgagattaataaggcatgcatgccg
tttggccttcaccggcagttcccagaaaacaacttgcagatgatggtgcagtcgggagcc
aaaggatcgactgtgaacacaatgcagatctcctgcctgctgggtcagattgaattggaa
ggccgaagacctccactgatgccctccggcaaatcgctgccgtgtttccagccctatgat
gtgacccccagatcggggggcttcgtcactggcagatttctcaccggcatcaaaccaccg
gagttcttctttcactgcatggccgggagggaaggtctggtagatacagctgtcaaaacc
agccgctcggggtacctccagaggtgtatcataaagcatctagaaggactggtggtccag
tacgaccttaccgtgcgagacagcgatggcagcgtgattcagtttctgtacggggaagac
gggctggacatccccaagacacagttcctgcagtccaaacagttccctttccttgccaac
aactacgaggtgatcaagaaatcaaagcacctggatgaagttttatccaagatggatccg
cagcaggcccaccaacactttcgagccctccgcaggtggcagagcaagcacgtggcctcc
ccgccgagagaaggggcctttttgaacttttcccagaaaatccaggcggccgtcaaggcg
ctgaacctctcgggaagcagtaaaaatgggcgcgatcccacagcccaagagattttaaag
atgtggtacgagttggacgagaagagccaaaagaaataccagaagcgggtggtcccttgc
cccgatccctgtctggccgtctggcgtccggacatctacttcgcctccgtgtccgagaca
ttcgaagacgaggtcgacgcctacgcgagggagtgggccgccgagaacgagaacggtttc
ctgaatacgggactctctcccgagagcttgaggaccttgctgcatctgaaatggcagcgt
gctctgtgtgaccccggagaggcggtgggcctgctagccggccagagcatcggggaaccc
tccacccagatgaccctcaacaccttccacttcgccggcagaggagagatgaacgtcacc
ttggggatccccaggttgagggaaatcctcatggtggccagcgccaacatcaaaactccc
atgatgagcgttccagtgctcaacaccaagaaggcgctcaagagggtgaagaagctgaag
aagcaactgacccgcgtgtgcttaggggaggtagtgcaaaaaatcgacatccaggaatcg
ttctgcacggaaggaaagatgaacaagttccgcctcttccaaatccggtttcacttcctg
ccgcccgaggattaccagcaagagaaatgtctgaagccggaggacattttacatttcatg
gagaacaggttctttaaacttctgacggaaaccatcaagaggaagagcaataaactgact
tctttcaacctggtgaactcgcgcagagcaaaacagagggatctggataccgacggggat
gctccagccagtcaggaaaattttgacaacgacaaggaagaggaggggccgatcgttgac
ggcgaagcagaagaaggagatgccgacgccactgacaagaagcacaaagataagcaagag
gaagaggtggactacgagagcgaagaggaagagtatgcggagagtgacaataacgaggac
gaacgagaggacgaggagggcgatggcgaggaggagcaggacaatgaagccggtctgctt
ctggagggagacggtcaagcgccttcctccctcggtcacatcgggggaagacgggccgga
agccaggcggaccaaatggccgagctgaggattcaggccgtgaagaacatccatccaagc
atacaggactacgcctatgatccggtggaaggtctgtggtgtgaggtgaccctgaagctg
cctctgatgaaggtgcactttgacctgtgctccctggtggtctccctggcccagcacgtc
gtggtctacgagaccaagggaatcacccgctgcctcctgaacgacaccaccaagaagaac
ggggagagggagctcgttttaaacaccgaggggatcaaccttccggagctgttcaaatac
gccagcgccctggatctgcagcgtctctattccaacgacatccacgccatggccaatacg
tacggcatcgaggccgccctgcgggtgatcgagaaggaaatcaaagacgtgtttgccgtg
tacggaatccaagttgatcctcgccacctctccctggtggcagattacatgtgcttcgaa
ggcgtctacaaaccactgaaccgctacgggatccaatccaactcatcccctctgcagcag
atgacattcgaaaccagcttcaagttcctgaagcaagccaccatgatgggtgcgcaggac
gagctgagatcgccttcggcgtgcctggtggtggggaaggtcgtcaagggaggaaccggc
ctgtttgacctcaagcagcccctgagatga
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integrated database retrieval system
