Ornithorhynchus anatinus (platypus): 100083049
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Entry
100083049 CDS
T01045
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
100083049 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oaa04040
]
100083049 (SCN1A)
Ion channels [BR:
oaa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100083049 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
PFF1_TM
Neur_chan_memb
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
100083049
NCBI-ProteinID:
XP_028927935
Ensembl:
ENSOANG00000006225
LinkDB
All DBs
Position
9:complement(13962336..14081309)
Genome browser
AA seq
2000 aa
AA seq
DB search
MEPSVLVPPGPDSFSYFTRESLATIEKRIAEEKAKNPKPTKKNDSGPKPNSDLEAGKSLP
FIYGDIPPGMVATPLEDLDPYYVNKKTFIVLNRGKTIFRFSATSALYLLAPFNPFRRLAI
KILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIFARGFCIDD
FTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHTIETNRTWEYNG
VLVNETIREFDWNSYVQDKRYHYFVEGFLDALLCGNSSDAGQCPEGFMCVKAGRNPNYGY
TSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVV
AMAYDEQNQATLEEAEQKEAEFQQMLEQIKKQQETAQATAAAASEQSREPSAVGALSESS
SEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFQKSESEDSIRRKGFRFSIEGNRL
TYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHSTFEDNES
RRDSLFVPRRERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVSLVGGPSVPTSPIG
QLLPEVIIDKPATDDNGTTTETEVKKRRSSSIHVSMDFLEDPSQRQRTMSVASILTNTLE
ELEESRQKCPPCWYKFSNIFLIWDCSPYWIQIKNIVNIFVMDPFVDLAITICIVLNTLFM
AMEHYPMTEHFTEVLSVGNLVFTGIFAAEMFLKIIAKDPYYYFQEGWNIFDSFIVTLSLV
ELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTVVLAIIVFIFA
VVGMQLFGKNYKECVCKINEKCVLPRWHMYDFFHSFLIVFRVLCGEWIETMWDCMEVAGQ
AMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAASDDDNEMNNLQIAMGRMHYGIDI
AKKEIREFFQKAFVKKQKALDEIKPLDDLNKKDGCMANHTGEIGKEYEYLKNGNGTTSGI
GSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNDS
SSSEGSTIDIGLPEEEQPVAEPEDAEEPEACFTEGCVRRFKCCQVSVESGKGKHWWNLRK
TCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGYQAYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIINVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFDITQ
VNNHSDCDDLVARNESARWRNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKDM
TETLARINLVFIIMFSGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREIGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPNKANPG
SQVKGDCGNPSVGICFFVSYIIISFLVVVNMYIAVILENFSVATEESADPLSEDDFEMFY
EVWEKFDPDATQFMEFKKLSEFAAALEPPLNLPQPNRLQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMQSNPSKQSYEPITTTLKRKQEEVSAVIIQRAYRRH
LLKRTISQVSFTHNKNKSKGGASLRVREDGLIDRLNENSITEKTDLTMSTAVCPPSYDRV
TKPVLEKHEKEDKDDKAKRK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcagtgcttgtaccaccaggacctgacagcttcagctacttcacccgagaa
tctctcgccactattgaaaaacgcattgcagaagagaaagccaagaatcccaaacccacc
aagaaaaatgacagtggtcccaaacccaacagtgacttggaagcagggaaatccctccca
tttatttatggagacattcccccaggaatggtggcgaccccgttggaagatctggaccca
tactacgtcaataaaaaaacttttatagtattgaacagaggaaagacaatcttccgattc
agtgccacctctgccctgtaccttttagctcccttcaatccttttaggagattagctatt
aagattttggtacattcattattcagcatgcttatcatgtgcactattttgacgaactgc
gtatttatgacaatgagtaaccctccagactggacaaagaatgtagagtacacttttact
ggaatatatacatttgaatcacttataaaaatttttgctagaggcttctgtatagatgat
tttactttcctccgggatccatggaactggttggatttcactgtcatcacatttgcgtat
gtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaattccaggcctgaagacaatcgtgggggccctgatccag
tcagtgaagaagctttccgatgtaatgatcctgactgtgttttgtctgagtgtatttgct
ctaataggacttcagctattcatgggcaacctgaggaataaatgtgtgcagtggcctcca
actaacgcttccttggaggagcatactatagagactaaccgcacctgggagtacaacgga
gtactagtcaatgaaactatccgtgagtttgactggaattcctacgtccaagataaaaga
tatcattactttgtggaaggatttctcgatgctcttctttgtggtaatagttcggatgca
ggccagtgcccagaaggatttatgtgtgtgaaagctggtaggaaccctaactatggctat
acaagctttgacactttcagctgggccttcttgtccctctttcggctgatgactcaggac
ttctgggaaaacctttatcaactgacactccgtgctgctggcaaaacatacatgatattt
tttgtcctggtgattttcctcggctctttttatctgataaacctgatcctggctgtggtc
gccatggcttatgacgaacaaaatcaagccacactggaagaagcagagcagaaggaggct
gaatttcaacagatgctggagcagataaaaaagcaacaggaaactgctcaggcaacagca
gctgcagcatcagagcagtcccgagaacccagtgcagtgggggcgctctccgagagctct
tctgaagcctccaagttgagctcaaaaagcgccaaagagaggaggaacaggagaaaaaag
agaaaacagaaagagcagtctggcggagaagagaaagacgaggatgaatttcagaaatct
gaatccgaagacagcatccggagaaaaggcttccgtttctccattgaagggaaccggctg
acttatgaaaagagatattcttcccctcaccagtctttgctgagcattcgcggctccctg
ttctctccaagacgtaacagcagaacgagcctcttcagctttagggggcgggcgaaggat
ataggctcagagaacgattttgccgacgatgagcacagcacctttgaggacaacgagagc
cggagggactccctcttcgtgccccgcagagaacggcgcaacagtaacatcagtcaggcc
agcaggtcatcccggatgctggccgtgtttccggtgaacgggaagatgcacagcaccgtg
gactgcaacggggtggtgtccttggtcggtggaccttccgtccctacgtcgcccattgga
cagcttctgccagaggtgataatagataagccagctactgatgacaatggcacaactact
gaaactgaagtgaaaaagaggcggtcgagttctatacatgtttccatggattttctggag
gatccttcccaacggcagagaacaatgagtgtggccagtattctaacaaataccttggaa
gaacttgaagaatccagacagaaatgccctccatgctggtataaattttccaacattttc
ttaatttgggactgctcgccgtattggatacaaatcaagaatattgtcaatatatttgtt
atggatccgtttgtcgatcttgcaatcaccatttgcattgtcttaaacaccctattcatg
gccatggaacactaccctatgacagagcatttcactgaagtcctttcagtaggaaatttg
gtgtttactgggatctttgcagcagaaatgtttctaaaaataattgccaaagatccttat
tattattttcaagaaggatggaacatcttcgatagctttattgtgacccttagtttagtc
gaactcggtcttgctgatgtagaaggattatcggttctccgatctttccgactgcttcga
gttttcaagctggcaaagtcttggcccacattgaacatgctgataaagatcattggcaac
tcagtgggggctctgggaaacttgaccgtggtgctggccatcattgtcttcatcttcgct
gtggtcgggatgcagctctttgggaagaactacaaagaatgtgtctgcaagatcaatgaa
aaatgtgtgcttccacgctggcacatgtatgacttcttccactctttcctgattgtgttc
cgtgttctgtgtggagagtggatagagaccatgtgggactgtatggaagttgcaggtcaa
gccatgtgccttactgtcttcatgatggtcatggtgattggaaacttagtggtactgaat
ctattcctggctttgctgctgagctcatttagtgcagacaaccttgctgcttcagatgat
gataatgaaatgaataatctccagatcgctatgggaaggatgcattatggaatagatatt
gcaaaaaaagagatacgagaatttttccaaaaagcttttgttaaaaaacaaaaggcttta
gatgagatcaaaccacttgatgatctaaacaaaaaagacggctgcatggccaatcacacg
ggagaaataggaaaagaatatgagtacctcaaaaatgggaatggaactaccagtggaata
ggaagtagtgtggaaaagtacataattgatgaaagtgattatatgtcatttataaacaac
cccagtctcactgtgacggttccaattgctgttggtgaatctgactttgaaaatttaaac
acagaagacttcagtagtgaatcggatctggaagaaagcaaagagaagcttaatgacagt
agctcatcggaaggcagcactatagatattggtctccctgaagaagaacaacctgtggct
gagcctgaagatgctgaggaaccagaggcctgttttactgaaggctgtgtacgaagattc
aaatgctgtcaagtcagtgtggaatcaggaaaaggaaagcactggtggaatttgaggaaa
acatgcttcaaaatagttgaacataactggtttgagaccttcattgtcttcatgattctc
ctcagtagtggtgctctggcttttgaagatatatatattgagcaacgaaaaaccatcaaa
actatgcttgaatatgctgataaagttttcacttacatctttattctggagatgcttctt
aaatgggtggcatatggctatcaggcctattttacaaatgcctggtgttggttagacttc
ttgattgttgatgtgtccttggttagtttaacagcgaacgccttgggctattcagaactc
ggtgccattaaatctctaaggactctgagagccctgagacctctgagagccttatcgcga
tttgaagggatgagggtggttgtgaatgcccttttaggagcaattccatccatcatcaac
gtgcttctcgtttgtcttatattctggctaattttcagcatcatgggagtaaatctgttt
gctggcaagttttaccactgtgttaacactacaactggtgagatgtttgacatcactcaa
gtcaataatcattctgactgcgatgatcttgtggcaagaaatgagtctgcccgatggaga
aatgtgaaagtaaactttgataatgtaggatttgggtatctttctttacttcaagtagcc
acatttaaaggatggatggatattatgtatgcagcggttgattcaagaaatgtggagctc
cagcctaagtatgaagataacctgtacatgtacctatactttgtcatctttatcatcttt
gggtcattcttcaccctgaacctattcattggtgtcatcatagataatttcaaccagcag
aaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactataat
gcaatgaaaaaactgggatccaagaaaccacaaaagcctattcctcgaccagggaacaaa
ttccaaggaatggtcttcgactttgtaaccagacaagtttttgatatcagcattatgatc
ctcatctgcctcaacatggtaaccatgatggtggaaacggatgatcagagtaaagacatg
acggaaactctagcccggattaacctggtattcataattatgttctcgggagaatgtgtg
ctgaagctcatctccctccgccattattacttcaccattggctggaatatctttgacttc
gtggttgtcattctctccattgtaggcatgtttctagccgagctgatagaaaaatatttt
gtgtctccgaccctgttccgagtgatccgtctggccaggatcggccggatcctgcggctc
atcaaaggagccaaggggatccgcacgctgctctttgccctgatgatgtctcttcctgcc
ttgttcaacatcggcctcctgctcttcctggtcatgttcatctacgccatcttcggcatg
tccaacttcgcctacgtcaagagggagattgggatcgacgacatgttcaacttcgaaacc
ttcggcaacagcatgatctgcctgttccaaatcaccacctccgccgggtgggacggtttg
ctggccccaatcctgaacagcggacccccagattgtgacccaaataaagcaaaccctgga
agtcaagttaaaggagattgtggcaacccctctgttgggatttgcttttttgtcagttac
atcatcatatcgtttctggtggtggtgaacatgtacatcgctgtcatcctggagaacttc
agcgtggccacagaagaaagcgccgatcccctgagcgaggatgactttgagatgttctat
gaggtgtgggagaagtttgacccagatgcaacccaattcatggaatttaaaaagttatcg
gagtttgcagccgccctggaacccccacttaatttaccacaacccaatagactccagctc
atcgccatggatctacccatggtcagcggggacaggattcactgtctcgacatcttattt
gctttcaccaaacgcgttttgggggagagtggagaaatggatgccctccgcatacagatg
gaagaacgctttatgcaatccaatccttctaaacaatcctatgagccaattacaaccacc
ctgaaacgaaaacaagaggaagtatctgcagtgatcatccagagggcttacagacgtcac
cttttaaagcgaaccatatcacaggtttcctttacccacaacaaaaataagagcaaaggc
ggggctagcctgcgggtgagagaagacggtcttatcgacaggctaaatgaaaactccatt
acggaaaaaacagacctgaccatgtcaacggcagtgtgtccgccttcctacgatcgggta
accaagccagtcttggagaagcatgaaaaagaagacaaagatgataaggcaaagagaaaa
tag
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integrated database retrieval system
