Ornithorhynchus anatinus (platypus): 100083653
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Entry
100083653 CDS
T01045
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04151
PI3K-Akt signaling pathway
oaa04510
Focal adhesion
oaa04512
ECM-receptor interaction
oaa04820
Cytoskeleton in muscle cells
oaa04974
Protein digestion and absorption
oaa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100083653 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100083653 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100083653 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100083653 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100083653 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100083653 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oaa04147
]
100083653 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
100083653 (COL6A2)
Exosome [BR:
oaa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100083653 (COL6A2)
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100083653 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
100083653 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
100083653
NCBI-ProteinID:
XP_001514218
Ensembl:
ENSOANG00000013567
LinkDB
All DBs
Position
7:complement(39116835..39167328)
Genome browser
AA seq
1030 aa
AA seq
DB search
MGRGVAEMLHLGLLLWGLLAPLHAQQYPQYVNNIGLELTDSRISERRNCPEKTDCPINVY
FVIDTSESVAMQPPIESLVDHIKDFVIQFTSQLENEFYQNQVAISWHYGGLHFSDLVEIF
SPLPSNKEAFRNKLSGVKYFGRGTFTDCAIANMTEQVTQSQVAGVNFAVVITDGHVTGSP
CGGMKLQAERARDAGIKLFSVAVNENLYESGLREIANLPYELYRNNYTTLKRGIDYDTIN
KIIQVMKHEAYGECYKLSCLEIPGPPGPKGYRGQKGAKGNMGDPGEPGQKGRQGDPGIEG
PIGFPGPKGVPGLKGEKGEFGGDGRKGAYGLAGRNGTDGQKGKLGRIGPPGCKGDPGDKG
PDGYPGNAGSPGEPGDPGIKGDPGRAGRRGPPGEVGEKGNRGYKGNSGAPGSPGLKGAKG
GPGPVGPKGEPGRRGDTGVKGSPGSDGAKGEKGDIGQEGPRGLPGEVGNKGAKGDRGLPG
PRGSPGLPGEPGKEGSRGDPGDAGPRGQSGPRGPKGDRGRPGFSYPGPRGEPGEKGEPGP
RGPEGGRGDFGLKGAPGSKGEKGDPADPGPPGEPGLRGPPGRPGPEGEPGPPGDPGLTEC
DVMTYVRETCGCCDCEKRCGAVDIVFVIDSSESIGFTNFSLEKNFVINVVSRLGAIAKDP
KSETGARVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALQFAYN
KLIKESRRKKTKVFAVVITDGRHDPRDNDANLRALCHVDVTVNAIGIGDMFHKRQEDETL
KSIACGNVSQVHGMNLFSELVAEEFIDKMEDVLCPDPEIVCPELPCQTELYVAQCTQRPV
DIVFLLDGSERVGENNFHKAQSFVEEVTQRLTLARSDDDNMNARVALLQYGGEAEQEVVF
PLTSNLTVISSALANLRYLDSSSNVGNGIVHAINHIVIPPVDNQKKARPNAELSFVFLTD
GVTESKSLKEATEAMKKQDVVPTVVALGSDVDMDVLLEISLGDRASIFREKDYDSLSQPS
FFDRFIRWIC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtggagttgccgagatgctccacctcggtcttctgctctgggggctcctggca
cccctccatgcccagcagtatcctcaatatgtgaacaatattgggttagaacttaccgac
tccaggatttccgaaagacgcaactgtccagaaaagacagactgccccatcaacgtgtac
ttcgtcatcgacacgtccgaaagcgtcgccatgcagcctcccatcgaaagtctggtggat
cacatcaaggactttgtgattcagtttaccagccagctggagaacgagttctaccagaac
caagtggccatcagctggcattacggagggctgcacttctccgacctcgtagagatcttc
agtccactgcccagcaacaaagaggccttcaggaacaagctctcgggcgtcaaatatttt
ggccggggcacattcacagattgcgctatcgccaacatgaccgagcaggtgacgcagagc
caggtggccggagtcaacttcgccgtggtcatcaccgacggccacgtcactggcagtccc
tgcggagggatgaagctacaagccgagcgggcccgagatgcggggatcaaactcttctcc
gtggccgtcaacgaaaacctatacgagtccggcctccgggagatcgccaacctcccttat
gagctttaccgcaacaactacaccaccctgaaacgcggcattgactacgacaccattaac
aaaatcattcaggtcatgaaacatgaagcatacggagagtgttacaagctgagctgtctg
gaaatcccaggaccccctggaccgaagggctacagaggacagaagggtgcaaagggtaac
atgggtgacccaggtgaacctggacagaaaggacgacagggagacccaggtattgaaggt
ccaattggattcccaggtccaaaaggtgttcctggtttgaaaggagaaaagggtgagttc
ggtggagacgggagaaagggtgcttatggactggctggcagaaatggaaccgatggccaa
aagggcaaattgggacgcattggacctcctggatgtaagggagaccctggtgataagggc
cctgatggctatccaggaaatgcaggaagtccaggagaaccaggagacccaggtattaag
ggagatccgggccgtgcgggacgtagaggacccccaggagaagtaggagaaaaaggaaac
aggggatacaaaggcaatagtggagctccgggaagtcctggcctcaaaggagccaaagga
ggccctgggcccgttggacctaaaggagaaccgggccgtcgaggggatactggagtcaaa
ggtagcccaggcagtgatggagccaaaggagaaaagggagacatcggccaagaggggcca
agaggactaccaggtgaagttggaaacaaaggagcaaagggagacagaggtctgcctggg
cccagaggatccccgggtctgcctggagagcctggcaaagaaggatcaagaggggatcca
ggtgatgcaggacccaggggccaatcgggccctcgaggaccaaagggagacagaggtcga
cctggctttagttatcctggtcctagaggagaaccgggcgaaaagggagaacccggtcct
cgaggccctgagggtggaagaggagactttggtttgaaaggagctcccggaagcaaagga
gagaaaggtgaccctgccgatcctggcccccctggtgaacctggacttagaggacctcca
ggaagaccaggaccagagggtgaacctggtccacctggagatcccggtcttacagaatgt
gatgtgatgacctacgtgagagagacatgtggctgctgcgactgtgagaagcgctgtggt
gctgtggacatcgtgtttgtcatcgacagttcggagagtatcggttttaccaacttctcc
ctggagaagaattttgtcatcaacgtagtcagccggcttggtgccatcgccaaagacccc
aagtctgagacaggggcccgcgtgggcgtagtgcagtacagccacgagggaacattcgag
gcaattcagctggacgacgagcggatagattccctctctagcttcaaggaggccgtgaaa
aacctagagtggatcgccggcggcacctggactccctccgccctgcagtttgcctataat
aagctcataaaagagagcaggcggaagaagaccaaggtgtttgcggtcgtgatcacggac
gggcgccacgatccccgggacaatgatgccaacctgcgggccctctgccacgtggacgtg
acggtcaacgccatcggcatcggggacatgttccacaaacgccaagaggatgagaccctg
aagtccatcgcctgtgggaacgtatcccaggtgcacggcatgaatctcttctctgagttg
gtggctgaagaattcatcgataaaatggaggatgtgctctgcccagacccagagatcgtc
tgcccggagcttccctgtcagacagaactctatgtagcccagtgcacccagcgtcccgtt
gacatcgtcttcctgctggatggctcagagagggttggggagaacaatttccacaaggcc
cagagctttgtggaagaggtaacccagaggctcactctggctagaagtgacgatgacaac
atgaacgcccgcgtggccctcctgcagtatggcggagaagcagaacaggaagtcgtcttc
cccctcacctccaacctgaccgtcatctccagtgcactggccaatctcaggtacctcgac
tcctcctccaacgtcggcaacgggatcgtccacgccatcaaccatatcgtcatccccccg
gtggacaaccagaaaaaggcccgacccaacgcggagctctccttcgtcttcctcacggat
ggcgtcacggagagcaaaagcctgaaggaagccactgaggccatgaaaaagcaggatgtg
gttcccacggtggtggcccttggcagtgacgttgacatggacgtactgctggagatcagc
ctgggggaccgggcttccatcttccgggagaaggactatgacagcctctcccagcccagt
ttctttgacaggttcattagatggatctgttag
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