Ornithorhynchus anatinus (platypus): 100083879
Help
Entry
100083879 CDS
T01045
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oaa03016
]
100083879 (CDKAL1)
Enzymes [BR:
oaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100083879 (CDKAL1)
Transfer RNA biogenesis [BR:
oaa03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100083879 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
100083879
NCBI-ProteinID:
XP_028908614
Ensembl:
ENSOANG00000011129
LinkDB
All DBs
Position
X2:26310544..26614380
Genome browser
AA seq
568 aa
AA seq
DB search
MPAACDSSPDDIEDLATGGDPPGRPPPRPDVVPRPRRPKARRPSPPDEQPPPHSTIPGIQ
KIWIRTWGCSHNNSDGEYMAGQLAAYGYTITENAAEADLWLLNSCTVKSPAEDHFRNSIK
KAQEEDKKVVLAGCVPQAQPRQDYMKGLSIIGVQQIDRVVEVVEETVKGHSVRLLGQKKD
NGKRMGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQ
SFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEA
MAKILSHPRVYAFLHIPVQSASDSVLMGMKREYCVADFKRVVDFLKEKVPGITIATDIIC
GFPGETDEDFQDTVKLVEDYRFPSLFINQFYPRPGTPAAKMQQVPAQVKKQRTKELSQLF
HSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPQFMGKMVEVDIYESGK
HFLKGQPVSEAQVYTPSISTPLAKGEVSGLTEEFKQVLENGSGPKAHPGAAIQPQRPPGA
RQDGRQAILTVILILLAVLVALVLKTHQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggcctgcgactcctcgccggacgacatcgaggacctggcgacggggggcgac
cccccggggaggccgcccccgaggccggacgtcgtccccagaccgcggaggcccaaggcg
cggagaccctcgccccccgacgagcagccgcctccccacagcaccatccccggcattcag
aagatctggatccgaacctggggctgctctcacaataattccgacggagaatacatggcc
ggacagctcgccgcttacgggtacaccatcacagaaaatgccgcagaagcagatttgtgg
ttgctgaacagttgcacggtaaaaagcccagcagaagaccacttcagaaattcaattaag
aaagcccaagaggaagacaagaaggtggttttagctgggtgtgtccctcaagcacagcct
cgccaagactacatgaaaggactcagcattataggggttcagcaaatcgatcgtgtggta
gaagttgtggaggagacagttaaaggtcactccgtgcggctgctgggtcagaagaaggat
aatggaaagcggatggggggagcgcgattggatctgccaaagattaggaaaaacccactg
atagaaatcatctccatcaatacggggtgtctcaacgcatgtacctattgcaaaaccaag
catgccagaggaaatttggcaagttatcctatcgatgaactagtggagagagccaaacag
tcttttcaagagggggtctgtgagatatggctgaccagcgaagacacgggggcttacggc
cgagacatcggcacggatctgcccaccctcctgtggaaactggtggaagtcattcccgag
ggcgccatgttgagactcggcatgaccaaccccccctacattttagagcatctggaggca
atggccaagatcctcagtcaccccagagtctacgccttcctgcacatcccggtccagtca
gcctccgacagcgtgctcatgggaatgaaacgcgagtactgtgtggccgacttcaaacga
gtggtggattttctgaaagaaaaggttccgggaattaccatcgccacagacatcatttgc
ggcttccccggggagacggatgaagacttccaagacaccgtgaagctggtcgaggattac
aggttcccgagcctctttatcaaccagttctacccacggcctgggacccctgccgcgaaa
atgcagcaagtgcccgcgcaagtgaagaagcaaagaacaaaggagctgtctcaactgttt
cattcctacaatccctatgaccacaagattggcgagaggcagcaagttttggtgacggaa
gagtccttcgattccaaattttacgtcgcgcacaatcgcttctatgaacaggttctggtg
cccaagaacccgcagttcatggggaagatggtcgaagtggacatttatgaatcagggaag
catttcttgaaggggcagccggtgtctgaggcccaagtgtacacaccgtccatcagcaca
ccactggccaagggagaggtttccggtttaactgaggaattcaagcaggtgctggaaaat
ggctcgggccccaaagcccaccctggggccgcgatccagccacagaggccgccaggggcc
agacaagatggcagacaggcgatattgacagtcatcctgattctacttgctgtccttgtt
gccctggttttgaagacccaccagtaa
DBGET
integrated database retrieval system
