Ornithorhynchus anatinus (platypus): 100083893
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Entry
100083893 CDS
T01045
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04151
PI3K-Akt signaling pathway
oaa04510
Focal adhesion
oaa04512
ECM-receptor interaction
oaa04820
Cytoskeleton in muscle cells
oaa04974
Protein digestion and absorption
oaa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100083893
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100083893
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100083893
09142 Cell motility
04820 Cytoskeleton in muscle cells
100083893
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100083893
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100083893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oaa04147
]
100083893
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
100083893
Exosome [BR:
oaa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100083893
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100083893
Hyaluronan
Extracellular matrix or blood plasma proteins
100083893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Radical_SAM
Copine
Motif
Other DBs
NCBI-GeneID:
100083893
NCBI-ProteinID:
XP_028926614
LinkDB
All DBs
Position
8:complement(40217654..40296352)
Genome browser
AA seq
2620 aa
AA seq
DB search
MKMLLILYFVAIWMGTSLTQGSAAPEFADVVFLVDSSDNLGSKAFPFVKMFINKMINALP
IEASKYRIAVAQYSDDLHSEFLLNTFKSKNPMLNYLKKNFAFRGGSPRLGQALQRAHKTY
FSGLTGGRDAKQFPPVLVVLASGPSEDEVEAPAKALQRDGVKIISLGMSAASDRVLKAMA
TPQYDFHLPKIRDVGMFSSNMTQIIKNIVKDQAGKDDTPLEACKTSSLADIAFLVEESVP
GNGRNFENLQTFLKETLSSLDVKENCTRIALVTYGTRTHVISSLRNDTTQEELLQEIENL
SPKAGKAFIGAAINVTRKEIFSRGAGSRKSQGVQQIAVLITHRSSEDSVSEAALSLRREG
VTVFAIGIKGANETQLDWIVSYPPERYVSTLKTYSDLAIHHGLFLKKLQNEIRYKGSVLS
EQTVRLQSGCVETEEADIYFLIDGSGSIRRRDFQDIKTFLNGVIKMFSIAPHKVRIGAVQ
YSTLIRVEFYIDQYSNQVNLQKAIEGITQYKNRTYTGEALKYMLKLFQDPQWQRGPHVPR
HLIILTDGKSDDSVDEPARMLRDAGVNIFAVGVKDAKTAQLQAIAGSEERVYCVQNFDAL
GALKDVVVRDLCFEEACKMMEADIVFLVDSSGSIGADNFEKMKTFMKNVVNRTKIGADQV
QVGLVQFSDINKEEFQLNQYNTKSGVSDAIDRLSQIGRGTLTGSALTFVSDYFHVSKGAR
PNVKKFLVLLTDGKSQDAVKEAAIALRQGGVTVYSVGVFGSEYSELEEISGSSDMVFYVE
NFDFLDRVVDVLFFDVCSLYDDCKRIQVLDVVFVIDNSGSLSETQYESIINFTIHLVNRS
DVGSDGVQFGALKYSDDPQILFYLNKHTTRSGIIKDLREAKQVRGRTYTAKALRHSNMFF
MEENGSRLRRGVKQILIVITDGESHDRYELSASAKALRDKGIIIYAVGVAGAKETELLDI
AGSQDKYFYVDSFEKLKDIYKSITNFACGNSQEECNIQEADLVFLCDGSTSISQADFDYM
KEFLIEVTNNLDIQPFKVQVGMAQFSHDYQEEFKLNRFSNRLLLTDRINKTIKTEGGTSI
GKALRKVRSYFKPDGGSRINAGISQILLLITDGQSQDPVASAAEELRRLGVEILTVGVGD
VNLDQLLQITGSPDNILTVGKFQEVKKVKKRVIRNICRPPEKIRCCVDVVVGFDISSYQN
GQLLFQDQPLLESYLLELLRPVSHLKGVSCEAGSLTQVRIAFQVQNADRPFTPKFQVYSE
NILKDLKRVRVTGPTHLSGHFLHSLWDTFQNQSSAQSKVVLVFSDGLKSDEENVLTLEEK
SDELRKAGLNALFIISLSRALRSEDIQGIEFGKGFEYRTHLTIGMNGLGSMLSTLVANVA
ERTCCCEFCKCSGDQGVKGSPGPAASKGPLGFKGSMGHRGEEGEYGKRGDPGPEGEKGVR
GCAGERGYKGVRGLSGEKGENGEAGIFGINGEEGNHGIPGMKGEKGYPGYQGSPGSRGSP
GDHGPKGVRGDPGSLGRHNVIRGPKGSKGERGRQGRRGLSGVPGNQNAKGNIGREGQRGH
QGPKGRDGELGFKGEEGSAGYKGPQGSRGTVGTKGEKGTPGSKGPQGPQGPGGSKGNPGK
SGLVGEKGEPGNPGREGLPGPHGDRGVQGEYGRPGYGRTGRKGNKGQKGSPGDSGLKGDV
GGLGIKGDPGPKGLTGQMGPAGTSGSVGTPGSQGPPGQRGAKGPQGLTSFAQCDLVQFVR
DRSSCWKGKPDCPAYPTELVFAIDMSRVVTERRFSETKDMIVSIVNDTKIRTRNCPVGAR
VSVVSYGTKTRNHIRLSDHYQKKKLIEEINKIAYERTTRDQNLGQAMRFVAKNLFKRTLR
GANVRRIAVFFSHGLPADPLTLATATMEFSALNIIPVVLAFSDERAVQDAFELDDSGTFQ
LISVLTTGSSGAAEKLQLCTLCYDPCFPTGCVINPRPPVTSYVDAAFLLDAPESMGFSAF
EEMRAFLTTVLDNFDITSEPGISVQGDRVALLSYSSEKPIRPAKVEFDLTAQGNKYLIRK
YLQNSLKQHKGQAFTGYSLQSAIDVVFSKSTNMRDHKIIFVITAGNAGLLKNKASAKVFL
KAKCQGYAIFVLSLGSTHLDTELEALASHPPEHHLIRLGRVHKPDYDYAVGFIKPFIRSV
KKSVDRYPPTILESRCRTSLLERDFALRRDSQSLLTEEYIVTASGGGLLSAPGHSDIVSN
SRESTDLFYPAEQILVPEEAEVNYEESRNREEMMSLFSDEISHMNNFAAEDNLRENGEWD
TSESANPFLHKAYIDVAFLLDGSQNVGSTEFEEMKDFVRSAVENFYIASDPMTSTIGDRV
AVLSHAPPGYLPNTEECPVKVEFDLVTYNNLRQMKSHLQESFQQLDGDAFIGHALRWTVD
NIFLGTPNPRKNRVIFVVTTGKTSSLDKEVLKKESLRAKCQGYAIFVFSMGPAHGDEELE
DLASHPLDHHLVRLGRIHKPDFDYIVRFIKPFIVSVRRAVNQYPSTDIMEKCINISSQIT
APPEVEDFLQEHTILLLPDLYEVDSANGDAFAANGPQDYPFILVEGISNNDSVDSIDWIR
NLNNLLSTSELMVKEEPPCSEENIILTETQQEENSDDDGE
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttactaatcttgtacttcgttgcaatttggatgggaacatctttaactcaa
ggatctgcagcccctgagttcgccgatgttgtgtttctggtggatagctccgataacctg
ggaagcaaggcctttccctttgtgaagatgttcattaacaagatgatcaatgctcttccg
attgaggccagcaaatatcgtatcgctgtggcccagtacagtgacgatctgcacagtgaa
ttcctgctgaacaccttcaagagcaagaaccccatgctgaactacctgaagaagaacttt
gccttcaggggtggatccccgcggctaggccaagccctccagagagctcacaaaacttac
ttttcggggctgaccggtggcagagacgccaagcagtttcccccggtgctggtggtcctg
gcttcgggcccgtctgaagatgaggtggaagcgcctgccaaggctttgcagagagacggg
gtgaaaatcatctccttggggatgtcagcggcttctgacagagtcctgaaagccatggcc
acccctcagtatgatttccaccttcccaagatcagagacgttggcatgttttcatctaac
atgacccagatcattaagaatattgtaaaggatcaggccggaaaagatgatactcctttg
gaagcttgtaaaacatcctccctcgctgacatcgcattcctagtagaggagtctgtacct
ggcaatggaagaaactttgagaatcttcagaccttcctgaaagagactctatcttccctg
gatgtgaaggagaactgtactaggatagctctggtgacctacggcaccagaactcatgtg
atctcctcactaagaaatgacacaacgcaggaggagcttctgcaggagatcgagaacctg
tctcccaaggctgggaaagccttcattggagccgccatcaacgtgaccaggaaagaaatc
ttcagcagaggggccggcagtcgaaagtctcaaggggttcagcagatcgccgtcctgatc
actcatcggtcttcagaagacagcgtgagcgaggcggctctgagcctgcgcagagagggt
gtgactgtgtttgccattggcattaaaggtgctaatgagacccagttagactggattgtt
tcttaccctccggaacgttatgtttccacactgaagacctattcagacttggcaattcac
catgggttatttctgaaaaaactccagaatgaaattcgttacaaggggtctgtcctatct
gaacagactgttcgtctccaatccggctgtgtggaaaccgaagaagctgacatctacttt
ctcattgatggttcgggaagcatcagaagaagggatttccaagatataaagacatttctt
aatggagtgataaaaatgtttagtatagcacctcacaaagtcagaattggagctgtgcaa
tattcaactctaattagagtggaattttatattgatcaatatagtaatcaagtaaattta
cagaaggctattgaaggcataacacaatataaaaatagaacgtacacaggagaagctctg
aaatatatgctgaagttgtttcaagatccacaatggcagcgcggacctcacgttccccgt
cacctcattattctgacggatggcaagtccgatgacagcgtagatgaaccagcgagaatg
ctaagagatgcaggagttaatatttttgcagttggtgttaaagatgctaaaacagcacag
ctacaagcaatcgcaggatcagaagagcgggtttactgtgtgcaaaactttgacgccttg
ggagccttaaaagatgtagttgttcgggacctctgctttgaagaagcctgcaaaatgatg
gaagccgacatcgtgtttctggtggatagttctgggagcataggagcggacaattttgag
aaaatgaaaacattcatgaaaaacgtggtgaacaggactaagattggtgccgaccaagtg
caggttggtctcgtgcagttcagtgacatcaacaaggaagagtttcagctcaatcaatat
aacaccaaaagtggggtgtctgatgcgatcgacagactgtcgcagatcggacggggcact
ctgacaggaagtgccttgacctttgtgtcggactattttcacgtctccaagggcgcacgt
cccaacgtcaaaaagttccttgtcctcctcaccgatgggaaatcgcaggatgctgtaaaa
gaagcggccatagctctccgccagggtggcgtcactgtctattccgtgggggtgtttggc
tctgaatattccgagttggaggaaatcagtgggagttctgacatggttttttatgttgaa
aattttgactttctggaccgcgttgtggatgtgcttttctttgatgtatgcagtctttat
gatgactgtaaaaggattcaagtgttagatgttgtatttgtgatagataattcaggaagc
ttaagtgagactcagtacgaaagcattataaacttcaccattcatttggtgaacagatca
gacgttggcagtgatggagttcagtttggagccctcaagtactccgacgacccacaaata
ctgttctacctcaataagcacacaaccaggtcgggaatcattaaggatcttcgggaagct
aagcaagtcagaggtaggacttacacggcaaaggctctgcgtcattcaaacatgtttttt
atggaggaaaacggaagccgtctaagaagaggtgtgaaacagattctgattgtgatcact
gatggagaatcccacgataggtatgagctcagtgcttcagccaaagccttaagagacaaa
ggcattatcatctatgcagtaggtgtagctggagcaaaagagacagaacttctggatatt
gcaggatcccaagataaatatttttatgtggattcatttgaaaaactgaaggatatttac
aaaagcataacaaattttgcatgtggaaattcacaagaggaatgtaacatccaagaagca
gatctggttttcctctgtgacggttctacaagtataagccaagctgattttgactacatg
aaggagtttttgatcgaagtgactaataatttggacattcagcctttcaaagtgcaagtg
ggaatggcccagttcagccatgactaccaggaagaatttaaactgaacagattttccaac
agactactcctgactgatcgcatcaacaaaaccataaaaactgaggggggcacctctatc
ggaaaagcgctcaggaaagtgagaagctattttaagccagatggaggcagcagaataaat
gctggcatttcacagattttgctccttatcactgacgggcagtcacaagacccggtggcc
agtgcagctgaagagttgagaaggttgggtgttgagatcctgactgttggagtgggggac
gttaacttggatcaacttcttcagataaccggaagtccggacaatatattaactgtgggt
aaattccaagaggtgaagaaagtgaaaaaaagggtcatccgcaacatctgcagaccccct
gagaaaatcagatgctgtgtggatgttgttgtgggctttgacatctcatcatatcagaat
gggcagctcttgttccaggaccaacctctgctggaatcttacctcttggagctcttacgg
ccagtcagccatctaaagggtgtgagctgtgaggcggggtcattgacccaagtaagaatt
gcatttcaggtgcagaatgccgacaggccatttacccctaagttccaggtctacagtgag
aacatcctgaaagacctgaaacgagtcagagtcacggggccaacccacctcagtggacat
ttcttgcattccctgtgggatacttttcagaatcaatcttctgctcagagtaaggttgtg
ctcgtgttttcagatggactaaagagtgatgaggaaaatgtcctaacactcgaagaaaaa
tcagatgagctcaggaaagcaggactgaatgccctgttcatcatctccctgagtagagcc
cttcgttcagaagacattcagggcattgaatttggaaaagggtttgaatacaggactcac
ttaactattggaatgaacggtctgggcagcatgctgtccacacttgtggccaacgttgct
gagaggacgtgctgttgtgaattttgcaaatgctctggagaccaaggcgtgaagggatcc
ccaggaccagcagcaagcaagggacctctgggttttaaaggcagtatggggcatagagga
gaagagggagaatatggcaaacgaggagatcctggaccagaaggagaaaagggtgttcga
ggatgtgcaggggaaaggggatataaaggagtcagaggactatctggagaaaagggagaa
aatggagaagcaggaatctttggaataaatggagaagagggcaatcatgggatccctggg
atgaaaggagaaaaaggttacccaggttatcagggcagtccaggtagcagaggttctcct
ggtgaccatggtccgaaaggtgtgagaggagatcctggcagtttgggaagacacaatgtc
ataagaggacccaaaggttccaaaggagaacgaggaagacagggcagaagaggattgtca
ggggtgccaggcaatcaaaatgccaaaggaaacataggaagggaaggtcaaagaggtcat
caaggtccaaagggaagagatggagaacttggtttcaagggtgaagaaggatcagctggc
tataaaggaccacaggggtcgagaggaactgtaggcactaaaggggaaaaaggaactcct
ggaagtaaaggacctcaggggcctcaaggaccaggagggtctaaagggaatcctggaaaa
tctggacttgtaggggaaaaaggagaacctggaaaccctggaagggaaggcctccctggg
ccacatggtgatcgaggagttcagggagagtatggcagaccaggatatggccggaccgga
agaaaaggaaacaagggacaaaagggatccccaggagatagtggactaaagggtgatgta
ggtggtcttggaattaagggagatcctggtcccaaaggattaacagggcaaatgggtcca
gcaggaacatctggatctgtaggtactccaggatcacagggacctccgggacaaaggggg
gctaaaggcccgcaggggctgacttcatttgcccaatgtgaccttgttcagtttgtgcga
gatcgcagctcatgttggaaaggaaaaccagactgccctgcatatccaacggagttggtt
tttgcaatagacatgtcacgggttgtcacggagagaagattttctgaaacaaaggatatg
atcgtatcgatcgtgaatgacaccaaaatcaggacaagaaactgtccagtgggagcaaga
gtctctgtcgtctcttacggtaccaagaccagaaaccacatccgcctgtcagaccactac
caaaagaaaaagcttatagaagaaataaataaaatagcttatgaaagaacaacacgggac
cagaaccttggccaggcgatgagattcgtggctaagaatcttttcaaaagaaccctccga
ggcgctaacgtgagaaggatcgctgtatttttcagccatggtctaccggcagatcctctg
acacttgccacagccaccatggagttcagtgccctcaatatcattccagttgtccttgct
ttcagtgatgagagagctgtccaggatgcctttgagctcgatgactctggcacatttcaa
ctgatttctgttctgacaactgggagttctggtgcagcagaaaaacttcagctgtgtaca
ctttgctatgatccgtgctttccaacaggctgcgtgataaacccgaggcccccagtgact
tcctatgtggatgctgctttcctcttagacgcacctgagagtatgggattctccgcgttt
gaggaaatgagagcctttctaaccactgtcctagacaactttgatattacctcagaacct
ggaatttctgtccaaggtgatagggtggctttgttgagctactcttctgagaaaccgata
cgaccagcgaaggtagagtttgatttaaccgcacagggaaacaaatacctgatcaggaaa
tatctccagaactctctgaaacagcataagggacaagcttttactggttattccctgcag
tcggccattgatgtcgtcttctcgaagtccaccaacatgagagaccataaaatcattttt
gtcatcactgctggcaacgcaggtcttttgaaaaacaaagcgtcagcgaaagtatttctg
aaagccaagtgtcagggatatgccatatttgtgttatctctgggctctacacatctcgac
acagaactggaagcgctggcaagccaccccccagagcatcacttgattcgcctgggtcga
gttcacaaacctgattatgactatgccgtgggattcattaaaccgttcatacgctcggtc
aaaaagtcagtcgatcggtatccacctacgattttggaaagccggtgcaggacatccttg
ctagaaagggactttgctttaagaagagattctcaaagcttattaaccgaagagtatatt
gttacagcctcgggaggaggcttattaagtgctccgggacattcagacattgtgtcgaat
tcgagggaaagtacagatttgttctatcctgccgaacagattttagtgcctgaggaagca
gaagtaaactatgaagaatcgaggaatagagaagaaatgatgagcctcttttcagatgaa
ataagtcacatgaataattttgctgcagaagacaatctgagagaaaacggggaatgggat
acttctgagtctgccaatccctttttacacaaggcatacatagatgtcgctttcctgttg
gacggctctcaaaatgtggggagtactgagtttgaagaaatgaaagactttgtaagatca
gcagttgagaatttttatattgcttccgacccaatgacctccactataggcgacagagtg
gccgtcctaagccacgctcctccgggctatctgcccaataccgaagaatgcccagtcaag
gtggaatttgatttagtgacatataacaatctacgtcaaatgaagagtcatctccaagaa
tcttttcaacaactggatggagatgctttcattggccatgctcttcggtggacagttgat
aacatcttcttagggacacccaatccgagaaaaaatagagtcatcttcgtggtgactact
ggaaaaaccagctctttggacaaggaagtactaaagaaagaatcactaagggccaagtgt
caaggatatgccatatttgtgttttctatgggccccgcgcacggtgatgaggaactggaa
gacttagccagccaccccctggatcatcacttggttcggctcggcagaatccacaaacct
gacttcgattacattgtgaggtttattaagccgttcatagtctcagtcagacgcgcagta
aaccaatatccttccacagatatcatggaaaaatgtatcaatatcagctctcagataaca
gcccctccagaggtagaggattttctgcaagaacatacgatactcctccttccagaccta
tatgaagttgactcagccaacggtgatgcttttgcagcaaatggtccccaggactatccg
ttcattctggtagaaggtatttcaaacaatgattctgtggacagcattgactggatcaga
aatctgaacaaccttctttcaaccagtgaattaatggtcaaagaagaaccaccgtgttca
gaagaaaatataatccttactgagactcagcaagaggaaaacagtgacgatgacggggaa
taa
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integrated database retrieval system
