Ornithorhynchus anatinus (platypus): 100084972
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Entry
100084972 CDS
T01045
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100084972 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100084972 (PATL1)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100084972 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
100084972 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
100084972
NCBI-ProteinID:
XP_028916478
Ensembl:
ENSOANG00000011117
UniProt:
A0A6I8NKB7
LinkDB
All DBs
Position
3:18557751..18592640
Genome browser
AA seq
773 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEEKP
PEAAREETGNGNNDEMDLLGDHEENLAERLSKLVIENELEDPAIMQAVQTRPPVPQPGGL
NSSIWDGSAVLRRIRGPLLTQEMPAVSVLEYALPPRPPQGPEEERDLSERALPRRSTSPV
IGSPPVRAVPIGTPPKQGTAPGFNQQILCPKPVHVRAPMQQRYPAPYGERMSPNQLCSVP
SSSLLGHPFPSTVAPVLSHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLASMNPKLLQG
RVGQMMPPTAGFRAFFGAPPPPTPPPPLPPPSQQHPACPGAHLQNLRSHHQMFRPDTTHL
HPQHRRLLHQRQQQNRNQHRSVNGAAGDRSHRSSHQEQLRKDPYANLMLQREKDWVSKIQ
MMQLQSTDPYLDDFYYQNYFEKLEKLSAMEEMHGDGPKKERTKLITPQVAKLDHAYKPVQ
FEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLFTIEKTYSLLLDVE
DYERRYLLSLKEDRPALVGERKQKICDMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMV
ARLLPFLSPEQAADILMATARNLPFLIKKDAQDEVLPCLLRPFSFFLYHLPSATVTSLLQ
QLMNLPQSASAPAPANPHLTAVLQNKFGLSLLYLILSRGEELQSSDAATELMQDNQWTEL
MFVATRELLRVPQATLAKPVSTPANLASLFSRYVDRQKLNLLETKLQLVQGMR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtccttggaagactgccctctggatgaagacgaagatgcctttcaa
ggtctgggtgaggaggatgaagatattgatcagttcaacgatgatacatttggggcgggg
gcagtcgacgatgactggcaggaggcccacgagagactggccgagttggaagagaagccg
ccagaggcagcgcgagaagaaacagggaacggcaacaacgatgagatggacctgctgggg
gaccacgaagagaacctggcagagaggctcagcaagctggtgattgagaacgagctggag
gacccagcaataatgcaggccgtgcagacacggcccccagtgccgcagccaggaggtctc
aattccagcatctgggatggatctgcagtcctgagacgcatccgagggccactgcttact
caggagatgcctgccgtgtccgtgttagaatacgccttgcccccgaggcccccgcagggc
ccagaagaggagagggacctttctgagcgagcgctgccgaggcgctccacctcccccgtc
atcgggagcccccccgtcagagccgtccccatcggcaccccgcccaagcaagggacggcg
cccggcttcaaccaacagattctctgtccgaagcccgttcatgtccgagccccaatgcag
cagagatatcctgctccctatggcgagaggatgtccccaaaccagctctgcagcgtcccg
agttcttccctcctgggccacccattcccttccaccgtggcacccgttctcagccacctt
cagagagcccaacttctaggtggagcacaggctggacggatgtctcccagccagtttgct
cgggtctctggacttgtcgggagccccctcgcctccatgaaccccaagttgttgcaaggg
cgggtcgggcagatgatgccacccaccgcaggattccgtgccttctttggggcaccccct
cctcccacacccccaccaccgcttccgcctccttcccagcagcaccccgcgtgtccaggg
gctcacctacagaacctaagatctcatcaccagatgttcaggccagacacaactcacctc
catccccagcatcgacgactcttgcaccagagacaacagcagaaccggaatcagcaccgg
agtgtaaacggagccgctggggatcgaagtcaccgcagcagccatcaagaacagctgcgc
aaagacccctatgccaatctcatgttgcagagggaaaaggactgggtgtccaagatccag
atgatgcaactgcaaagcactgatccttatctagatgacttctattaccagaactatttc
gagaaactggagaagctctcggcaatggaggagatgcacggtgatggccccaagaaagaa
cgcaccaaactcatcaccccccaggtggccaaattggaccacgcgtacaagccagtgcag
ttcgaaggctctttaggaaagctcaccgtctccagcgtgaacaacccccggaaaatgatc
gacgccgtggtgacgtcccgtagcgaggatgacgagactaaagaaaaacaggtccgggac
aagagacgtcagacgctcttcacaattgagaaaacatacagcctgcttcttgacgtggag
gattatgagaggcgttacctcctgagcctcaaagaagaccgaccggctctagtgggcgaa
aggaagcagaagatctgcgacatgtatgacaatttgagggggaaattgcctggtcaagaa
agacccagcgatgaccattttgtgcagataatgtgtatccggaaagggaagcggatggtg
gcccgtctcctccctttcctgtccccagagcaggcggctgacatcctcatggcaacagct
aggaacctgccttttctgatcaagaaggatgcccaagatgaggtgctgccttgtttattg
agacccttctccttcttcctctatcatcttccatcggcgactgtcaccagccttctgcaa
cagttaatgaacctacctcaaagtgcatctgcaccagcccctgccaacccgcacctcacc
gctgtgctccagaacaagttcggcctgtcgctgctctatctgatcctgagccggggggag
gagctgcagagttctgatgctgctacggagctgatgcaggacaaccagtggacagagttg
atgttcgtggccactcgagaactcctgcgggtcccccaagccacgctggccaagccggtc
tccacgcccgcgaacctcgcgtccctgttctcccgctacgtcgaccgacagaaactgaac
ctgctggagacaaagctgcagttggttcaagggatgcggtga
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