Ornithorhynchus anatinus (platypus): 100086300
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Entry
100086300 CDS
T01045
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oaa03041
]
100086300 (RBM39)
Spliceosome [BR:
oaa03041
]
Common components
Common spliceosomal components
General mRNP proteins
100086300 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
CDC45
Motif
Other DBs
NCBI-GeneID:
100086300
NCBI-ProteinID:
XP_028904837
Ensembl:
ENSOANG00000006045
UniProt:
F6QKF9
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Position
21:complement(483570..502718)
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AA seq
524 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSHSHDRKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKMGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQSEVTALAAAASVQPLATQCF
QLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLLPVRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacatcgacatcgaagcgatgctcgaggccccctacaagaaggatgagaac
aagttgagcagtgctaacggacacgaagagcgcagcaagaagagaaaaaagagcaagagc
cgaagccacagtcatgaccggaagagaagcaaaagcaaggagaggaaaaggagccgggac
cgcgagaggaaaaaaagcaaaagccgcgaaaggaagcgcagtcggagcaaagaacgcagg
cgcagccgctcccggagccgagagcgccgtttccgaggccgctaccggagtccctattcc
gggcccaagtttaacagcgccatccgaggaaagatgggcttgcctcatagcatcaaatta
agcagacgccgctccagaagtaaaagtccattcagaaaagacaagagcccggtgagggag
cccatcgataacctgactcccgaggagagagatgcccgcacggtgttctgcatgcagctg
gcggcccgcattcggccgagagacctggaggagttcttctccaccgttggcaaggtccgg
gacgtgaggatgatttccgaccggaactcgcggcgttccaaaggcatcgcgtacgtggag
ttcgtcgacgtcagctcggtgcctctcgcgatcggcttaaccggccaacgggtcctgggg
gtccccatcatagttcaagcgtcccaggccgagaagaaccgcgcggccgcgatggccaac
aacctccagaagggcagtgccgggccgatgcggctctacgtgggctcgctccacttcaac
atcacggaggacatgctgcggggcatcttcgagccctttggcaggatcgagagcatccag
ctgatgatggacagtgaaaccggacgttccaagggatatggatttatcacgttttccgat
tcggagtgcgccaagaaagccctggagcagctgaacggattcgagctggcggggcggccc
atgaaggtgggccacgtgacagagcgcaccgacgcctccagcgccagctccttcttggac
agcgacgagttggagaggaccgggatcgacctggggacgacgggccgcctgcagctcatg
gccaggctggccgagggtactggcttacagattccccccgcggcccagcaggccctgcag
atgagcggatccttagcgttcggggccgtcgcggatttgcaaacaagactctcccagcag
agtgaagtcacggcgttggctgccgctgcctccgtacaaccacttgccactcagtgtttc
cagctgtccaacatgttcaacccacagacggaagacgagctgggctgggacacggagatt
aaggacgacgtgatcgaagagtgtaacaagcacggaggagtcatccacatttacgtcgat
aagaactcagctcagggcaacgtgtacgtcaagtgcccctccatcgcggcggccatcgcg
gcggtcaacgcgttgcacggaaggtggtttgcaggtaagatgatcaccgccgcctacgtc
ccgctcccgacgtatcacaacctcttccccgactccatgaccgccacacagttactgctt
ccggttcgacgatga
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