Ornithorhynchus anatinus (platypus): 100087318
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Entry
100087318 CDS
T01045
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oaa03000
]
100087318 (SOX1)
Transcription factors [BR:
oaa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100087318 (SOX1)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100087318
NCBI-ProteinID:
XP_028904097
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Position
20:12009386..12012001
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AA seq
419 aa
AA seq
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MYSMMMEADLHSPGGGLQGPTALSGPPGPGGGGGGGGGGGGGGGPKASQDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLLKKDKYSLAGGLLAAGPGGGGGGGGGLGVAGPRMDSPGPAGGGPPGGGGA
AAGGGGGGGGGGTYPHVNGWANGAYPGSVAAAMMQEAQLAYGPHPAHGPHPAPPPPPPPP
PPPPPPPPPVHRYDMGALQYGGPLAGSQGYMGGSAPGYGGLPYGAAAAAAAAAAAAAAAS
SSGPGGAHQGAAAAAAAAAAAAAASSGALGALGSLVKAEPSVSPPVGAASHGRPPCPGDL
REMISMYLPAGDANDPAAAAAVAAAAAAAAAQGRLHPLPQHYPAAGPGVVNGTVPLTHI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaagcggacctgcactcgcccggcggcgggctccaggggccc
acggccctctcgggcccaccggggccgggcggcgggggaggagggggaggaggaggagga
ggaggtgggggccccaaggccagccaggaccgggtcaagcgtccgatgaacgccttcatg
gtctggtcccggggccagcggcgcaagatggcccaggagaaccccaagatgcacaactcg
gagatcagcaagcgcctgggggccgagtggaaggtcatgtcggaggcggagaagcgcccc
ttcatcgacgaggccaagcggctgcgggccctgcacatgaaggagcacccggattacaaa
taccggccgcggcggaagaccaagaccctgctgaagaaggacaagtactcgctggccggg
gggctgctggccgcggggcccggcggcggcggcggcggcggcggggggctgggcgtggcg
ggcccgcggatggacagtcccgggccggcgggcggaggcccgcctggaggaggaggagca
gcagccggcggcggcggcggcggcggcggcggcgggacctacccgcacgtcaacggctgg
gccaacggcgcctacccgggctcggtggcggcggcgatgatgcaggaggcccagctggcc
tacggcccgcacccggcgcacggcccgcacccggccccgccgccgcccccgccgcccccg
ccgcccccgccgcccccgccgccgccggtgcaccgctacgacatgggcgccctgcagtac
ggcgggcccctggccggctctcagggctacatgggcggctcggccccgggctacgggggg
ctgccctacggggcggccgccgccgccgccgccgccgccgccgccgccgccgccgcctcg
tcgtcggggcccgggggagcccaccaaggggcggcggcggcggcggcggcggcggcggcg
gcggcggccgcgtcgtccggggccctgggcgccctgggctcgctggtcaaggccgagccc
agcgtcagcccgccggtgggcgccgcctcccacggccggccgccctgcccgggagacctg
cgggagatgatcagcatgtacttgcccgccggagacgccaacgacccggcggccgcggcg
gccgtggcggcggcggcggcggcggcggccgcccagggccgcctgcacccgctgccccag
cactacccggcggccgggcccggggtggtcaacggcaccgtgcccctcacccacatctaa
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