Ornithorhynchus anatinus (platypus): 100088945
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Entry
100088945 CDS
T01045
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04140
Autophagy - animal
oaa04142
Lysosome biogenesis
oaa04148
Efferocytosis
oaa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100088945 (VPS16)
04140 Autophagy - animal
100088945 (VPS16)
04148 Efferocytosis
100088945 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100088945 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oaa04131
]
100088945 (VPS16)
Membrane trafficking [BR:
oaa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100088945 (VPS16)
Hops complex
100088945 (VPS16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
100088945
NCBI-ProteinID:
XP_028919250
Ensembl:
ENSOANG00000042830
UniProt:
A0A6I8P6A0
LinkDB
All DBs
Position
4:21006593..21022425
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AA seq
836 aa
AA seq
DB search
MDCYTANWNPLGEAAFYRKSELYSMDWNLTEELRDCLMAAAPYGGPIALLRNPWRKEKSP
SGRPVLETYSASGVALASMVWKSGQVAQLGWTASEELLCVQEDGSVLVYDLFCDFKRHLS
LGNEVLQNRVLEARVFHSEFGSGIAVLTGAHRFTLTANVDHLTLRRMPDVPGLQQSPTCW
TVLSQDRLTLILLAMGTDLFLLDNTVCSPVTPAGLAPGAGSVLQMAVSFNYRYLALFTDS
GLIWMGTASLKEKLCEFNCSIRAPPKQMSWCCRPRSQQRAVVLAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRILARTHHEFLQEVPGASEEIFKIASMAPGALLLEAQREYEKES
QKADEYLREIREQDLLADAVEQCIQAAACEQEPAIQKSLLRAASFGKCFIDKFPPEGFVR
TCRDLRVLNAVRDYQIGIPLSYAQYKQLTIEVLLDRLVLRRLYPLAIRICEYLRLPESQG
ASRVLAHWACYKVQQKDKSDEEVARAINQKLGDTPGISYSEIAARACHCGRSELAIKLLE
YEPRSGEQVPLLLSMKRSKLALSKALESGDSDLVFTVVLHLKNELNRGDFFMTLRSQPAA
LSLYRQFCKHQELETLRDLYNQDDNHQELGDFHVRDSYSGSDKRIEGRVAALQAAADEFS
KARNEFAAKATEEQMKLLRLQRRLEEEVGERFLDLSLHDTVSALILAGSHKRADHLARDF
RIPDKRFWWLKLTALAQREDWEELEKFSKSKKSPIGYLPFVEICMKHHNKFEAKKFALRV
SPEQKVKAAILIGDLEQAAEVALEHRNEAELSLVLSRCDPTLAERIQRARAQAQKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctcggcgaggcggctttctaccggaagtcc
gagctgtacagcatggactggaacctgacggaggagctgcgggactgtctgatggccgcc
gcgccctatgggggccccatagcgttgctaaggaacccgtggaggaaagagaagtccccc
agcgggaggcctgtgttggagacgtactcagcatccggagtagcgctggccagtatggtg
tggaagagtggtcaggtggcccagctgggctggacggccagtgaggagctgctgtgcgtg
caggaggacggctctgtgctcgtctacgacctcttctgtgacttcaaacggcacctcagc
ctgggcaatgaggtgctgcagaaccgggtgctggaggcccgcgtgttccactccgagttt
gggtccgggatcgccgtcctcacgggagcccaccgcttcacgctgaccgccaacgtggac
cacctcacactccgcaggatgcccgacgtcccagggctgcagcagtcaccgacctgctgg
accgtgttgtcccaggaccgactgactctgattctgctggcaatggggacggacctcttc
ctcctggacaacacagtctgctctccggtgactccagccggtctggcccctggggccggc
agcgtcctgcagatggccgtctccttcaattaccgctacctggcgctgttcaccgactcc
ggcctcatttggatgggcacagcctcactcaaggaaaagctgtgtgaattcaactgcagt
atccgagcccctccgaagcagatgtcctggtgctgccgtccacgtagtcaacaacgtgcg
gtggtcctggcctgggagcggcgcctcatggtggtaggagacgcgcccgagtctatccaa
ttcgtcctggatgaggactcctacctggtgcctgagctggacggggtccgtatcctggcc
cggacccaccacgagttcctgcaggaggtccccggggccagtgaggaaatcttcaagatc
gcctctatggcccccggcgctctcctcctagaggcccagagggagtacgagaaggagagc
cagaaggcggacgagtacctgcgggagatcagggagcaggacctgctggccgacgccgtc
gagcagtgcatccaagcggcggcctgtgaacaggagcctgccatccaaaaaagcctgctc
agggcggcttccttcgggaagtgcttcatcgacaagttcccgcctgagggtttcgtgcgg
acctgccgggacctacgggtgctcaacgccgtgagggactaccagatcggcatccccctc
agctatgcccagtacaaacagctcaccattgaggtcctgctggacagactggtgttgcga
cgtctgtaccctctggccatccgcatttgcgagtacctgcggcttccggagtctcagggt
gccagccgggtgctggcccattgggcctgctacaaggtgcagcagaaggacaagtctgat
gaggaggtggctcgggccatcaatcagaagttgggggacaccccaggcatctcctattcc
gagatcgccgcccgtgcatgccactgcggccgctcggagctggccatcaagctgctggag
tacgagccgcgctctggggagcaggtcccactgctgctcagcatgaagagaagcaaactg
gccctgagcaaagcgctcgagagcggggacagcgatctggtgttcacggtggtgctgcac
ctcaagaacgagctaaaccgtggggacttcttcatgacattgcgcagccagccggccgcc
ctcagcctctatcgccagttctgcaagcaccaggagctggaaactctgcgtgatctgtac
aaccaggacgacaaccaccaggagctcggggacttccatgtccgcgacagctactccggc
agtgacaagaggattgaggggcgtgtggcagctctgcaggcagcagcagatgagttctcc
aaggccagaaatgagtttgcagccaaggctacggaggagcagatgaagctgctgcgcctg
cagcgtcgcctggaggaggaggtgggtgagcgcttcctggacctgtcgcttcacgacacc
gtgtccgccctcatcctggccggcagccacaagcgtgccgaccacctcgcccgcgacttc
cgtatcccggacaagaggttctggtggctgaagctcacagccctggcccaacgagaagac
tgggaagagttggaaaagttctccaagagcaagaaatcccccatcggctatctgcccttc
gtggaaatctgcatgaagcaccacaacaagtttgaggccaagaagttcgctttgcgtgtg
agtccggagcagaaggtcaaggcggccatcctcatcggggacctggaacaagccgcagag
gtggccctggaacaccgcaacgaggcagagctcagcctggtcctctcccgctgcgacccc
accctggctgagcggattcagcgggcgcgggcccaggcccagaagaagtga
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