Ornithorhynchus anatinus (platypus): 100089012
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Entry
100089012 CDS
T01045
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oaa03009
]
100089012 (DDX56)
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100089012 (DDX56)
Ribosome biogenesis [BR:
oaa03009
]
Eukaryotic type
Pre-60S particles
Helicases
100089012 (DDX56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100089012
NCBI-ProteinID:
XP_028932099
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All DBs
Position
11:complement(1290592..1296106)
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AA seq
539 aa
AA seq
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MEDEPLGFEHMGLDARLLQAITDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AVPLLQHLLHRKETGPVVEQAVRGLVLVPTKELAQQAQTMIRQLAAYCARDVRVVDVSAV
EDSATQRALLMEKPDVVVGTPSRVHSHLQQGGLVLRDSLELLVMDEADLLFSFGFEEELK
SLLCHLPRIYQAFLMSATFNEDVQALKELVLHNPVTLKLQESQLPGPERLQQFQVLCEAE
EDKFLLLYALLKLRLLRGKSLLFVNTVERSYRLRLFLEQFSIPACVLNGELPLRSRCHII
SQFNQGFYDCIIATDGVIRRERARKGEKASDPEAGVARGIDFHNVAAVLNFDLPPSPEAY
VHRAGRTARADNPGTTLTFVLPAERPQLARIEETLGGESAEPVLQNYQFRMEEIEGFRYR
CRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDQPLHPAVVKPHL
SHVPDYLIPPKLRGIARPHSRRKRKRPLSSQKGSETRRPKNPLRTFKYTGKKPPAAKPS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaccgctgggcttcgagcacatgggtttggatgcgcggctcctccaggcc
atcacggacctgggctggtccagacccacgctgatccaagagaaggccatcccgctggcc
ctggagggcaaggacctgctggcccgggcccgcaccggctccgggaagaccgcggcctac
gccgtgcccctgctccagcacctgctgcaccggaaggagacggggcccgtggtggagcag
gccgtgcgggggctcgttctggtgcccaccaaggagctggcccagcaggcccagactatg
atccggcagctggcggcctactgtgcccgcgacgtgcgggtggtcgacgtgtccgccgtc
gaggactccgcgacccagagggcgctgctgatggagaagccggacgtggtggtggggacc
ccgtcgcgtgtgcacagccacctgcagcagggcggcctggtcctgcgggactccctggag
ctgctggtgatggacgaggccgacctgctcttctccttcggctttgaggaggaactcaag
agcctgctctgccacctgccccggatctaccaagccttcctcatgtcggccaccttcaac
gaggacgtgcaggctctcaaggagctggtcctgcacaacccggtgacgctgaagctgcaa
gagtcgcagctgccgggcccggagcgtctacagcagttccaggtgctgtgcgaggcggag
gaggacaagtttctcttgctgtatgccctgctgaagctgaggctgcttcgggggaagtcg
ctgctgttcgtcaacaccgtggaacggagctaccgcctccgcctcttcctcgagcagttc
agcatccccgcctgcgtgctcaacggcgagctgcctctgcgttctaggtgccacatcatc
tcccagttcaaccagggcttctacgactgcatcattgcgacagatggggtgattcgccgc
gagcgagcccgcaaaggagaaaaggcttcggatccggaggcgggggtggcccgcggcatc
gacttccacaacgtggcggccgtgctcaacttcgacctgccgccctcccccgaggcctac
gtgcaccgagcgggcaggacggcgcgcgccgacaacccgggcacaaccctgaccttcgtg
ctgcccgcagagcgcccgcagctggcacggatcgaggagactctcggcggagagagcgcg
gagcccgtcctgcaaaactatcagttccgcatggaggagatcgagggattccgctaccgc
tgccgggacgccatgcgttccgtgacgaagcaggccatccgtgaggctcggctgaaggag
atcaaagaggagctgctccactcggagaaactcaagacgtacttcgaagacaacccgagg
gacctgcagcttctgcgccacgatcagcccctgcacccggctgtggtgaagccgcacctc
agccacgtccccgactacctgatccccccgaaattgcgtggcatcgcccgcccccacagc
aggcggaaacgcaagaggcctttgtcttcccagaagggctccgagactcgcaggcccaag
aaccctctccgcaccttcaagtatacggggaagaaaccccccgcagccaaaccttcctga
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