Ornithorhynchus anatinus (platypus): 100089475
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Entry
100089475 CDS
T01045
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X2
KO
K16474
intraflagellar transport protein 88
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oaa03037
]
100089475 (IFT88)
Cilium and associated proteins [BR:
oaa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100089475 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_6
TPR_14
TPR_19
TPR_16
TPR_11
ANAPC3
TPR_17
ARM_TT21_4th
TPR_9
TPR_CcmH_CycH
TPR_10
ARM_TT21_5th
TPR_21
Consortin_N
TPR-S
ARM_TT21_C
TPR_MalT
HAT_PRP39_C
ARM_TT21_2nd
TPR_15
DUF6584
NBD_SMAX1
MIT
Motif
Other DBs
NCBI-GeneID:
100089475
NCBI-ProteinID:
XP_001516420
Ensembl:
ENSOANG00000009025
UniProt:
F7EL26
LinkDB
All DBs
Position
20:371593..413029
Genome browser
AA seq
823 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITA
VTRPLVTGFASKTTTLSSSMGRPMTGAVQDGVARPMTAVRAAGFTKAARGSAFDPLGQSR
GPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGRLKVNMG
NIYFKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIMG
MAPNLKAGFNLILSYFAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHTNLLIEAI
KNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSS
DRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDNE
GDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLM
VASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRVEKM
KEMREQRVKSGRDSSGRSKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYESSSN
KEIDVSYVDPLGPQTERPKTAAKKKIEEDDFADEELGDDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctcgccccagaaacagatgaagatgatctttattctggctat
aatgactataacccaacttacgatacagaggacttggagaatgatgcagcttttcaacag
gctgtgaagactagccatggcagaagacctccagtcacagccaaaattcccatcaccgca
gtaactcgacctctagttaccgggtttgcgtccaagacaacaacactgtcatcatcaatg
gggaggccaatgacaggggctgtccaggatggggttgctcgacctatgacagcagtgaga
gcagctggtttcactaaagcagcgagaggttctgcatttgacccccttggtcagtcgaga
ggccctgctcctcctttggaaaccaaaaatgaggatagtccagaagaaaaaattcgacag
ttggaaaaaaaggtgaatgaattggtagaagaaagctgtatcgccaacagctgtggagac
ctaaaattggcactggaaaaggcaaaagatgcaggaaggaaggagagagtcctggtgaga
cagcgagaacaagtgacaacaccagaaaacatcaatttagacttaacttactcagttctt
tttaacttggccagtcagtactcagctaatgaaatgtacactgaagcgctaaacacatac
caagttattgtgaaaaataagatgtttagtaatgcagggagactgaaagtgaatatggga
aatatctattttaaacaaagaaattattccaaagcaataaagttctatcggatggctctg
gaccagatcccaagtgttcataaagaaatgaggattaaaatcttgcaaaatattggtgtg
accttcgttaaaactggccaatattcagatgctattaattcttttgagcacataatgggt
atggccccaaatctgaaagcaggcttcaacttgatactgagctactttgcagttggggac
cgagaaagaatgaagaaggctttccagaaattgattgctgttccattggaaattgatgag
gatgacaaattcatttcaccaagtgatgactcacacactaatctgttgattgaagccatt
aaaaatgataacctaagacaaatggagcatgaaagaaaagccctagcagagaaatacatc
atgacggccgccaaactcattgctcccgcaattgaaacgtcatttgctgtaggctatgac
tggtgtgttgaagtagtaaaggcttctcagtatgtagaactagctaacgacttggaaata
aacaaagcaattaccttcttgaggcaaaaggactttaaccaagctgtagaaactttaaaa
atgtttgaaaagaaggacagtagagtaaagagtgcagctgcaacaaatctttcatttctt
tactatttggagaatgagtttacgcaagccaacaactatgcagacttggctgtgagttct
gatcgatacaacccgtcagcactcactaataaaggaaataccatttttgctagtggagat
tatgagaaagcagctgagttttataaggaagctctgagaaatgattcttcctgcactgaa
gcactttacaatattggtttaacatataagaagttaaacagactagacgaggctttggat
tgtttcctgaaacttcatgcgattttacgaaacagtgctcaagtcctttaccaaatagca
aacctatatgaaataatggaagatcccaaccaggccatagagtggctgatgcagctgatc
agtgttgtcccaacagatgctcgtgccttagccaaactaggagaactatatgacaacgaa
ggggacaaatcccaggcatttcagtactactatgagtcctatcggtacttaccttctaac
attgaagtcattgaatggcttggagcttactacattgacacccagttttgtgaaaaagcc
attcagtactttgaaagagctgctcttattcgtcccacccaagtgaaatggcagctgatg
gtggctagttgctacagaagaagtggtaactaccaaaaagctctggatacctataaggag
atccataaaaaatttccagaaaatgttgaatgtctacggttcttagttcggctctgcaca
gatatcggactgaaagaagttcaagagtatgcaaccaaactcaagagagtggaaaaaatg
aaagaaatgagggaacagcgggtgaaatctggcagagacagcagtggtcgcagcaagaga
gagggcagtgctggcagtgatagtggccagagctctggggccagtagtagaggagagcga
cttagtgccaaactgagatccttgcctggcgccaatgaaccgtatgaaagcagcagcaac
aaagaaatagatgtctcatacgtggatccactgggcccccaaacagaaagacccaagacg
gcagcaaagaagaaaatcgaagaggatgattttgctgatgaagagctgggagatgacttg
cttccagagtga
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