Ornithorhynchus anatinus (platypus): 100090453
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Entry
100090453 CDS
T01045
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100090453 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100090453 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100090453 (SUPT5H)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100090453 (SUPT5H)
RNA polymerase I system
100090453 (SUPT5H)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100090453 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW7_SPT5
KOW2_Spt5
KOW5_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100090453
NCBI-ProteinID:
XP_028920597
Ensembl:
ENSOANG00000008175
LinkDB
All DBs
Position
5:3384317..3396467
Genome browser
AA seq
1086 aa
AA seq
DB search
MSDSDDSNFSEEESDRSSEAEEVEQAEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWLAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEGTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGSKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSGGSSGGMSRGRGRRDNDLIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSG
SRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYDYGFD
DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS
YQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSGIEQNSSDWVTTDIQAKVRDTYVDSQVVGQTGVIRSVTGGMCSVYLKDSEK
VVSISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDQDEQLKILNLRFL
GKLLEA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgacgacagcaacttctccgaggaggagagcgaccgcagcagcgaggcg
gaggaggtggagcaagcggaggaggaacgccgaagcgtagcaggcagtgagaaggaggag
gagcccgaggaggaggaggaggaggaagaggaggaggagtacgatgaggaggaggaggag
gaggacgatgaccgacccccaaagaagccacggcacgggggcttcattctggacgaggct
gatgtggacgacgagtacgaagacgaggaccagtgggaagacggcgccgaggacatcctg
gagaaagaggagatagaagcttccaatatcgacaatgtggttttggatgaagaccgatcg
ggagcccgtcgactgcagaacctgtggagggaccagcgggaggaggagctgggcgagtat
tacatgaagaaatacgccaagtcgtccgtgggagagaccgtgtacggcggatcggacgaa
ctctcggacgacatcacccaacagcagctgttgccaggcgtcaaagaccccaatctgtgg
acagtgaaatgtaagatcggcgaggagcgggccacggccatcgccctgatgcggaagttc
atcgcctaccagttcacggacacgcccctgcagatcaagtcggtggtggccccggagcat
gtcaagggctacatctacgtggaggcctacaagcagacccacgtcaagcaggccatcgag
ggcgtgggcaacctgcggatgggctactggaaccagcagatggtgcccatcaaggagatg
accgacgtgctcaaggtggtcaaggaggttaccaacctcaagcccaagtcctgggtccgg
ctcaagaggggcatctacaaggatgacattgcccaggtggactacgtggagcccagccag
aataccatctccctgaagatgatcccccgcatcgactacgaccgcatcaaagcccgcatg
agcctgaaagactggcttgccaagaggaagaagttcaagcggcccccgcagaggttgttc
gatgccgaaaagatccggtccctcggaggagacgtggcgtcagacggggacttcctcatc
ttcgaggggaatcgctacagccgcaaaggatttctattcaagagcttcgccatgtccgct
gtgatcacggaaggcgtcaagcccacgctgtcggagttggagaagtttgaagaccagccg
gagggaatagacctggaggtggtgacggagggcacagggaaagagcgggaacacaacttc
cagcccggagacaacgtggaggtgtgcgaaggggagttgatcaatcttcagggcaagatc
ctcagcgtggacggcagcaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccagcccaggaattacgcaagtacttcaagatgggagaccacgtgaaggtg
atcgccgggcgcttcgagggcgacacgggtctcatcgtccgcgtcgaggagaacttcgtc
atcctcttctccgacctgaccatgcacgagctgaaggtgctgccgcgggacctgcagctg
tgctcggagacggcgtcaggagtggacgtcgggggccagcacgagtggggcgagctggtg
cagctggacccccagaccgtcggggtcatcgtccggctggagcgcgagaccttccaggtc
ctgaacatgtatgggaaggtggtgacggtgaggcaccaggccgtgaccaggaagaaagac
aaccgcttcgccgtggccctggactcggagcagaacaacatccacgtcaaggacatcgtc
aaggtcatcgacggcccccactcgggccgcgagggggagatccgccacctcttccgtggc
tttgccttcctgcactgcaagaaactggtggagaacggcggcatgttcgtctgcaagacc
cggcacctcgtcctggccggaggctccaagccccgcgacgtcaccaacttcaccgtgggt
ggctttgcccccatgagcccacgcatcagcagtccgatgcaccccagcgccggaggtcag
aggggtggattcggcagcggcggcagcagtgggggcatgagccgaggccggggtcgccgt
gacaacgacctcatcgggcagaccgtgcgcatctcgcagggaccctacaaaggctacatc
ggggtggtgaaagatgccacggagtcgaccgcccgtgtggagctgcactcgacgtgccag
accatctccgtggaccgacagcggctcaccaccgtgggttcccgccggccgggagggatg
acatcggcctacggacgcacccccatgtacggctcacagacccccatgtacggctcgggc
tcccggacccccatgtatggctcccagacgcctctgcacgacggaagccggacgccgcac
tacggctcgcagacgcctctgcacgacggcagccgcacgccggcccagagcggggcctgg
gaccccaacaaccccaacaccccgtccagggccgaggaggagtacgactacggcttcgac
gacgagcccaccccttccccccaggcttacggggggacgcccaacccgcagacgccgggg
taccccgacccctcgtccccgcaggtcaacccccagtacaacccccagacacccggcacc
cctgccatgtacaacacagatcagttctccccctatgccgccccgtcgccccaaggctcc
taccagcccagccctagtccccagagctaccaccaagtggcaccaagccccgtcggctac
cagaacacccactcgccggccagctaccaccccacgccctcgcccatggcttaccaggcc
agccccagccccagcccggtgggctacagccccatgaccccgggggccccctcccccggc
ggctacaacccccacactccgggctcggggatcgagcagaactccagcgactgggtgacc
accgacatccaggcgaaggtccgggacacctacgtggacagccaggtggtggggcagacg
ggcgtcatccgcagcgtcacgggaggaatgtgctccgtgtatttgaaagacagcgagaag
gtggtgagcatctccagcgagcacctagagcccgtcacccccaccaagaacaacaaggtg
aaggtgatcctgggcgaggaccgcgaggccacgggtgtcctgctgagcatcgacggagag
gacggtatcgtccgcatggaccaggacgagcagctcaagattctcaacctccgcttcctg
gggaaactgctcgaggcctag
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