Ornithorhynchus anatinus (platypus): 100090479
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Entry
100090479 CDS
T01045
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100090479 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100090479 (PAN3)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100090479 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
100090479 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
100090479
NCBI-ProteinID:
XP_028904297
Ensembl:
ENSOANG00000009070
UniProt:
F7GDD6
LinkDB
All DBs
Position
20:2544737..2618718
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AA seq
826 aa
AA seq
DB search
MNSGGLPPPASSSSSGAAALKLKFCRYYAKDKTCFYGEECQFLHEDPAAGPGLGLGLHGS
GAAAVAGPPGSKKAELDGLRLTIPGVDGGALADSSLTDSYFSTSFIGVNGFGSPAEAKYP
MMQRMTNSSSSPSLLNDSAKSYASHDPLSSPASSLFNDFGALSISQRRKPRKYRLGMLEE
RLVPVGSKTRKSKNPIGSLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTS
RLSNVSQSNMSAFSQALFSHPSMGGPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPANYLVPSSASTPVNNPVTQAPSPGQVIQKETVGGTTYFYTDTTPAPVTGMVFPN
YHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDSYH
SLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW
KKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQH
DGPLPRQHAGLLPESLIWAYIVQLSSALRTVHTAGLACRVMDPTKILVTGKTRLRVNCVG
VFDVLTFDSSQNNPLALMAQFQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINY
SSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLF
RLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNK
LDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggcggcctcccgccccccgcctcgtcctcgtcctccggtgcggcggccctg
aagctgaagttctgccgctactacgccaaggataagacctgcttctacggggaggagtgt
cagttcctccacgaagacccggcggccgggccggggctgggcctgggcctgcacggcagc
ggggcggcggcggtggcggggccgccggggtccaagaaggcggagctggacgggctccgg
ctgacgattcctggagtagacggaggtgcgttagcggatagcagtctcaccgattcgtac
ttcagcaccagctttattggagtcaatggatttggaagtcctgcagaagccaagtatccc
atgatgcagaggatgactaatagcagcagttccccaagccttcttaatgacagtgccaag
tcatatgcaagccatgatcctctaagttcacctgcttcgtccttatttaatgactttggg
gccctcagcatctctcagaggaggaagccaaggaagtatcgactggggatgctggaggag
aggctagttccggtgggatcaaagacacgaaaatcaaagaaccctattggctccctggct
gacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaaaac
aatttacagacaccaaatcctactgcaagcgagtttattcctaagggaggatcaacctcc
aggctgagtaacgtgtcccaatccaatatgtctgccttctctcaagccttgttctctcac
ccatccatgggaggccctgctactgctggattagcaccaggaatgtcactgtctgccggg
tcttccccccttcattcgccgaaaattacccctcacacgtctcccgcacctcgaaggaga
agtcatactcccaacccagcaaattatctggtgccttctagtgcctctacgcccgtgaat
aaccctgtcacgcaagccccgtctcctggccaggtgatccagaaggaaacggtgggcgga
acgacgtacttctacactgacacaactccggcacctgtcacaggaatggtatttccaaat
tatcatatttaccccccaactgcacctcatgttgcctacatgcaaccaaaagcaaatgca
ccttccttctttatggctgatgaactcagacaggaactgatcaacaggcatttaataacc
atggctcaaattgatcaagcagacatcccagccgtccctgcagaagttgacagctatcac
agccttttccctttggaaccactgccgccacccaaccggatacagaaatcaagtaacttt
gggtacattacatcatgctacaaagctgtaaatagcaaagatgatttgccatattgcctt
cggaggatacatggttttcggcttgttaacacaaaatgtatggtgttggttgatatgtgg
aaaaaaattcagcactcgaacattgtaacattgcgtgaggtgtttaccactaaagcattt
ggagaacattctcttgtgtttgcctacgatttccatgctggaggagaaactatgatgagc
agacactttaatgaccccagtgctgatgcctatttcaccaagaggaagtgggggcagcat
gacgggccgttacctcgacagcacgctggtttgttgccggagtctctcatttgggcgtat
attgtccagctgagttcagccctgcgaaccgtccacactgcaggcttggcatgtcgggtg
atggacccaacgaagatcttggtaactggcaaaacgaggttacgagtaaactgtgttggt
gtttttgatgttttaacatttgatagcagtcagaataatccactggcactaatggctcaa
tttcagcaagcagatctgatctcgttaggaaaagttgtgttggctttggcttgcaactct
ttggcaggaattcagcgagagaatttacagaaagctatggaactagtgacaatcaactat
tcctctgatctgaagaatctgattttgtatttgctgactgaccaaaaccggctccgtagt
gtaaatgatatcatgccaatgatcggtgctcgattctatacccagttggatgctgcccaa
atgagaaatgatgttatagaggaagatctggccaaggaagttcaaaatggaagactgttt
aggcttctagcaaaattgggaacaatcaatgagaggccagagtttcagaaagacccgacc
tggtcagaaaccggagaccggtatttgctgaaactctttagggatcaccttttccaccaa
gtgactgaagcggggaccccctggatcgacctcagtcacattatctcctgtctcaacaag
ctcgacgctggtgttccagagaaaataagcctcatctcccgagacgaaaagagcgtcctc
gtagtgacttacagtgatttaaagcgttgctttgaaaacactttccaagaactcatcgcg
gccgccaacggccagttgtag
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