Ornithorhynchus anatinus (platypus): 100090866
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Entry
100090866 CDS
T01045
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100090866 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100090866 (XAB2)
03041 Spliceosome [BR:
oaa03041
]
100090866 (XAB2)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100090866 (XAB2)
Spliceosome [BR:
oaa03041
]
Complex B
Other components
Prp19-related factors
100090866 (XAB2)
Complex C
100090866 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
Suf
TPR_8
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_16
RPN7
TPR_NPHP3
TPR_1
CCDC84
Motif
Other DBs
NCBI-GeneID:
100090866
NCBI-ProteinID:
XP_028907398
Ensembl:
ENSOANG00000037563
UniProt:
A0A6I8P5B1
LinkDB
All DBs
Position
X1:110462966..110472588
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AA seq
874 aa
AA seq
DB search
MPEAAAAPEPESEVEVKAQAKIKAGAGPRPERTDIFFEEEDLQYEEEILRNPFSVKCWFR
YIEFKQSAPRHALNLLYERALKELPGSYKLWYHYLKARRGQVKSRCVTDPAYEDVNNCHE
RALVFMHKMPRLWLDYCQFLMEQGLITRTRRTFDRALRALPITQHPRIWPLYLRFVRLHP
LPETAVRVYRRFLKLSPESAEEYIEYLRSIDRLDEAAQRLATVVNDERFISKEGKSNYQL
WHELCDLISQNPDKVQSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYE
EAIQTVVTVRDFTQVFDSYAQFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLIGR
RPLLLNSVLLRQNPHHVHEWHKRVKLHEGQPREIINTYTEAVQTVDPFKATGKPHTLWVA
FAKFYEDNGQLEDARTILEKATKVNFKQVDELASVWCECGEMELRHENYDQALRLLRKAT
ALPARRAEYFDSSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQI
VINYAMFLEEHSYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLF
EQALDGCPPKYAKTLYLLYARLEEEWGLARHAMAVYERATRAVEPGEQHDMFNIYIKRAA
EIYGVTYTRSIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSYCSQICDPRTT
GAFWQTWKDFEIRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVYSNATGTVSDLA
PGQSGLDDMKLLEQRAEQLAAEAERDRAPRTQGKILFVRSDASRHELAELAQQANPEEIQ
LEEEEDEEEELQPNEVQLEQQSIPAAVFGGLKED
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggcggcggcggcccccgagcccgagtcggaagtcgaagtcaaagcccaggct
aagatcaaggctggagccggcccccgacccgagcggaccgacatcttcttcgaagaggag
gatctgcagtatgaggaggagatcctgcggaaccccttttccgtcaagtgctggttccgc
tatatcgagtttaagcagagtgccccccgccatgcgctgaacctgctgtacgagcgggcc
ctcaaggagcttccgggcagttacaagctgtggtatcactacctgaaggcccggcgaggc
caggtgaagtcccgctgtgtgactgacccagcctatgaagacgtcaacaattgtcatgag
cgagcactggtgttcatgcacaagatgcctcgcctgtggctggattactgccagttcctg
atggagcagggcctcatcacccgcacccgccgcaccttcgaccgggctctgcgggccctg
cccatcacccaacacccacgcatctggcccctctacctgcgcttcgtgcgcctgcacccg
ctgccggaaacggccgtgcgagtgtaccgccgcttcctcaagctgagccccgagagcgca
gaggaatacatcgagtacctgcgctccatcgaccggctggacgaggctgctcagcgcctg
gcaaccgtcgtcaatgatgagcgcttcatctcaaaggagggcaaatccaactaccagctg
tggcacgagttgtgtgacctgatctcccagaacccagacaaggtccagtccctgaatgtc
ggcgccatcatccgcgggggtctcactcgcttcaccgaccagctaggcaagctctggtgc
tcgctggctgactactacatccgcagcggccacttcgagaaggcccgggacgtgtacgag
gaggcgatccagacggtggtgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagtttgaggagagcatgatcgccgccaagatggaaaccacctcggagctggggcgggag
gaagaggatgatgtggacctggagctgcggctggcccggttcgagcagctcatcggccgg
cggcccctgctgctcaatagcgtcctgctgcgccagaacccccaccacgtgcacgagtgg
cacaagcgcgtcaagctacacgagggccagccccgagagatcatcaacacctacacagag
gccgtgcagacggtggatcccttcaaggccacgggcaaaccccacacgctgtgggtggcc
tttgccaagttctatgaagacaacgggcagctggaggatgcccgcaccatcttggagaag
gccaccaaggtgaacttcaagcaggtggatgaactggccagcgtgtggtgtgagtgcggg
gagatggagctgagacacgaaaactacgaccaggccctgcggctgttgcggaaagcaacc
gccctgcctgcccgccgagccgagtactttgacagctcggagcccgtgcagaaccgcgtc
tacaagtctctgaaggtgtggtctatgctggccgacctggaggagagcctgggcaccttc
cagtccaccaaggctgtgtatgaccgcatcctggacctgcgcatcgccacgccccagatc
gtcatcaactatgccatgttcctggaggagcacagctacttcgaggagagcttcaaggcc
tacgagcgcggcatctcgctcttcaagtggcccaacgtgtcagacatctggagcacgtac
ctaaccaagttcatcgcccgctacgggggccgcaagctggagcgggcgcgggacctgttc
gagcaggcgctggatggctgtcctcccaaatatgccaagaccctgtacctgctgtatgcg
cggctagaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgggccacc
cgggccgtggagcccggcgagcagcatgacatgttcaacatctacatcaagcgggcagcc
gagatctacggcgtgacctatacccgcagcatctaccagaaagccattgaggtgctctca
gatgagcacgcccgagagatgtgcctccgcttcgccgacatggagtgcaaactgggggag
atcgaccgagcccgcgccatctacagctactgttcccagatctgcgacccccgtacgaca
ggggccttctggcagacgtggaaggactttgagatccgacacgggaatgaggacacgatc
cgggagatgctgcggatccgccgcagcgtccaggccacgtacaacacccaagtcaacttc
atggcctcccagatgctcaaggtttacagcaatgccacgggcaccgtgtctgacctggcc
ccgggtcagagcggactggacgacatgaagctgctggagcagagggccgagcagctagca
gccgaggctgagcgggaccgagcccccaggacccagggcaagatcctctttgtcaggagt
gacgcctcccgccacgagctggctgagctggcccagcaagccaaccctgaggagattcaa
ctagaggaggaggaagatgaggaggaagagctgcagcccaatgaggtgcagctcgagcaa
cagagcatcccggccgctgtctttggggggctcaaggaagactga
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