Ornithorhynchus anatinus (platypus): 100091415
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Entry
100091415 CDS
T01045
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X2
KO
K06527
vascular cell adhesion molecule 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04064
NF-kappa B signaling pathway
oaa04514
Cell adhesion molecules
oaa04668
TNF signaling pathway
oaa04670
Leukocyte transendothelial migration
oaa04933
AGE-RAGE signaling pathway in diabetic complications
oaa05143
African trypanosomiasis
oaa05144
Malaria
oaa05417
Lipid and atherosclerosis
oaa05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100091415 (VCAM1)
04668 TNF signaling pathway
100091415 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100091415 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100091415 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100091415 (VCAM1)
05143 African trypanosomiasis
100091415 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100091415 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100091415 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100091415 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oaa04515
]
100091415 (VCAM1)
04090 CD molecules [BR:
oaa04090
]
100091415 (VCAM1)
04091 Lectins [BR:
oaa04091
]
100091415 (VCAM1)
Cell adhesion molecules [BR:
oaa04515
]
Immunoglobulin superfamily
VCAM
100091415 (VCAM1)
CD molecules [BR:
oaa04090
]
Proteins
100091415 (VCAM1)
Lectins [BR:
oaa04091
]
I-type lectins (Siglecs)
100091415 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set
Ig_4
Ig_5
C2-set_2
Ig_6
C2-set_3
Receptor_2B4
V-set_CD47
C1-set
ICAM1_3_5_D2
ICAM_N
TMEM132_3rd
Motif
Other DBs
NCBI-GeneID:
100091415
NCBI-ProteinID:
XP_007663113
Ensembl:
ENSOANG00000001832
UniProt:
A0A6I8NLK5
LinkDB
All DBs
Position
4:complement(88333770..88352315)
Genome browser
AA seq
629 aa
AA seq
DB search
MAGKCVGLVLATEAILLALVTSETFKVEITPGPKIAAQIGNVTVLTCIATGCAAPTFSWR
TQIDSPLGGDLEQGVNKSILTMNPVDFKNEHSYLCTASCDTKKMERAIQVELYSFPHDPV
ITMSDFLEVGKPATITCQVSQVYPSERLKIELLKDGHIIREKEFFMDEEKKSLETKSLEV
TITPTTLDIGKSITCQAELPIVDMEFFPKLRKTTQKLPINTAPKNTVVSVTPSTVIQEGN
YVMMTCSSEGLPAPEISWSKKQKDGNLEILSHNATLILNAAMTADSGLYVCEGTNRVGKD
KKEVELIVQAAPKNTVVSVTPSTVVQEGNYVMMTCSSEGLPAPEISWSKKQKDGNLEILS
HNATLILNAAMTADSGLYVCEGTNRVGKDKKEVELTVQVAPRNTVISGAPTTTVQEGDYV
TMSCSSDGLPAPEISWSKKLDNGVLEFLSQNATLTFNATVTENSGIYVCEGSNKAGKERK
EVELIIQVPPKDTVLVAFPSNSVKEGDTVTISCTSVGVSPSQIVLRKKANPGQRVLASRN
GHYTIRDARLEDAGIYECESKTEVGQQLRSLKLDVKGRENHIDYFSPELVALYCVASLII
PSVGMIIFLVRKANVKGSYSLVDALKSKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaatgtgtcggactcgtcctagccacagaagcaattttgctggcgctggtg
acctctgaaacttttaaggttgagatcacaccgggacccaaaatcgccgctcagattggc
aatgtaaccgtgttgacctgcatagctactgggtgtgcggctccaactttctcttggaga
acccagatagacagtcctctgggtggggatttagaacaaggagtgaacaagtccatcttg
accatgaaccccgtggacttcaagaatgaacactcttacttgtgtaccgcctcttgtgat
actaagaaaatggagagggccatccaggtggagctttactctttcccccatgatccagtg
attacaatgagtgactttctggaggtggggaaacctgctaccatcacctgccaagtctcc
caggtgtatccatcggaacgcttgaagattgaactcctgaaagatgggcacatcatcagg
gaaaaagagtttttcatggatgaggagaagaaatctctggagaccaagagcttggaggtg
acgattacccccaccactcttgacattgggaaatcgatcacatgtcaggctgaattacct
attgttgacatggagttttttcccaagctgaggaaaaccacacagaaactccctattaat
actgcaccaaagaatacagttgtctccgtcaccccctccactgtcatacaggaaggtaac
tatgtgatgatgacatgttccagtgaaggccttcctgctccagagatttcttggagtaag
aaacagaaagatgggaatctggaaattctttcccataatgcaactctcattctaaatgct
gcgatgacagcagattctggactgtatgtgtgtgaaggaactaatcgggttggcaaagat
aaaaaagaagtggaattgattgttcaagctgcaccaaagaatacagttgtctccgtcacc
ccctccactgtcgtacaggaaggtaactatgtgatgatgacatgttccagtgaaggcctt
cctgctccagagatttcttggagtaagaaacagaaagatgggaatctggaaattctttcc
cataatgcaactctcattctaaatgctgcgatgacagcagattctggactgtatgtgtgt
gaaggaactaatcgggttggcaaagataaaaaagaagtggaattgactgttcaagtcgca
ccaaggaatacagtcatctctggagctcccaccactaccgtgcaggaaggtgattatgtg
acaatgtcatgttccagtgatggccttccggctccagagatttcttggagtaaaaaactg
gataatggggttctggaatttctttcccagaatgcaactctcactttcaatgctacagtg
acagaaaattctggaatttatgtgtgtgaaggaagtaacaaggctggcaaagaaagaaaa
gaggtggagttaatcattcaagttccacccaaagacacagtgcttgtagctttcccttcc
aacagtgttaaagaaggagacactgttactatctcttgcacatctgtgggtgtttctccc
agccaaattgttttgaggaagaaagccaatcctggacagcgagtactggcatccagaaat
ggtcattatactatacgtgatgctcggttagaagatgcgggaatttatgaatgtgaatcg
aaaactgaggttggacagcaattgagaagcctaaaacttgatgttaaaggaagggaaaac
cacatagactacttttctcctgaacttgttgcactctactgcgtcgcctccctcatcatc
ccaagcgtcggaatgatcattttcctcgtgaggaaagccaatgtcaagggttcctacagc
ctggtagatgcactcaaatccaaagtgtag
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