Ornithorhynchus anatinus (platypus): 100091486
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Entry
100091486 CDS
T01045
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oaa04121
]
100091486 (PDZRN3)
Enzymes [BR:
oaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100091486 (PDZRN3)
Ubiquitin system [BR:
oaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100091486 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
TRAF3_RING
RING_XB3-XBAT31
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100091486
NCBI-ProteinID:
XP_028907082
LinkDB
All DBs
Position
X1:complement(54041412..54313199)
Genome browser
AA seq
1064 aa
AA seq
DB search
MGFELDRFNGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVQCQRIS
TKELNHVLPLKSLILKLDIKCDNHGRGCERVVKLQQLGEHVEMCDFSPARCRNKGCSEVL
NLKDMDSHMRESCEARPVGLCEQGCGLVLTHREQRAGAHCCFQALKAHNGALQAKVAGLE
KELKKEALRVGKREKSLVAQLAAVQLELQMTALRYQKKFTEYSARLDCLSRSVASPASKG
EEMKTLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHD
RIIEVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTKIFTPSPESQLVDMSTQTDI
TFEHIMALTKMGSPTPPVMDSYLLPEEHSSTHEYFDPNDYMGSIHQEMDRDELELEEVDL
YRLNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNRE
EAVALLTSEESKNVSLLVARPEIQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTANV
LQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNADDHTPSSATLGS
QQKRMYSQDTLGSGDVPFSNESFISADCPDTDFLGIPVEECERFRELLELKCQVKSTNPY
SLYYPSSALEMNKSDHESVDRELEMLNEELRTIELECLNIVRAHKMQQLKEQYRESWMLH
NSGFRNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPNNSLHRI
AETVGCQGSEGAVSSGAANKATQKNLLAITESQDTDEVKYGPSPKDLDLSKQLENKDQKT
GDGSKSPTQVPKFGGSYLSSYHNSPYKHAHIPAHAKHYQSYMQLIQQKSAVEYAQSQMSL
VSMCKDLNSSNQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDD
AISELKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLREQQGAEEKKEMNIIELSH
KKMMKKRNKKIFDNWMTIQELLTHGTKSPDGSRVYNSFLSVTTV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaactggatcgcttcaacggggacgtggacccggacttcaagtgcaatctg
tgcaacaaagttctggaagatccgctcacgactccctgcggtcatgtgttctgtgccggc
tgcgtcttgccctgggtcgtccagcagggcagctgcccggtccagtgtcagaggatctcg
acgaaggagctgaaccacgtcctgcccctcaagagcctcatcctcaagctggacatcaaa
tgcgacaaccacggccggggctgcgagcgggtggtcaagctgcagcagctgggcgagcac
gtcgagatgtgcgacttctccccggcccgttgccggaataaggggtgcagcgaggtcctg
aacctcaaagacatggacagtcacatgcgggagagctgcgaggcccggcccgtgggcttg
tgcgagcagggctgcggcttggtgctgacccaccgggagcagcgagcgggcgcgcattgc
tgcttccaggcgctcaaagcgcacaacggcgcgctgcaggcgaaggtggccggcctggag
aaggagctcaagaaggaggctctgagggtgggaaagcgggagaagtcgctggtggcccag
ctcgctgccgtgcagctggagctgcagatgacagcgctgcgctaccagaagaagttcact
gagtacagcgcccgcctggactgtctgagtcgcagcgtcgcctccccggccagcaaggga
gaagaaatgaagacactgacgcttgttcttcatcgtgattctggctctctgggatttaat
attattggtggccggccatgtgtggacaatcaagatggctcttccagtgaaggaattttt
gtttcaaaaatagttgacagtgggccagctgctaaagaaggagggctgcaaattcatgac
cggattattgaggtgaatggaaaagacttatccaaggcaacccatgatcaggccgtggaa
gcattcaaaacagcaaaagagcccatcgtggtgcaggtcttaaggagaacaccacgcaca
aaaatattcacaccttctcctgagtctcagctggtagacatgagcacccaaactgatatc
acctttgagcatatcatggctctgactaaaatgggatctcctaccccaccagtcatggat
tcctatctgttgccagaagagcattcatcaactcatgaatactttgatccaaatgactac
atgggaagcattcatcaagaaatggacagagatgagcttgaattagaggaagtagactta
tatagactgaatagccaagacaaacttgggctcactgtgtgttacagaacagatgatgag
gatgacattggcatttacataagcgagattgatcccaacagcattgctgcaaaagatggt
cgcatacgagagggagaccgcattattcaaattaatggcatagaggtacaaaaccgagaa
gaagcagtagcacttctcaccagtgaagagagtaagaatgtctccttacttgtagcaaga
cctgaaatccagctggatgaaggctggctggatgatgatagaaatgattttctggatgat
ttgcacatggatatgctggaagaacaacatcaccaggcaatgcagtttactgcaaacgtg
cttcagcagaaaaagcatgaggaggacggaggcaccaccgacaccgcaaccatattatct
aaccaacacgagaaggacagtggtgtgggacgcactgatgagagtactcgaaatgacgag
agctcggagcaggagaacaatgccgatgatcacaccccatcttccgccactttagggagt
cagcagaagcgaatgtacagccaggacaccctgggaagcggagatgtgccatttagcaac
gaatcctttatctcagctgactgccccgacaccgatttcctggggatcccagtggaagag
tgcgagcggttccgggagctcctggaattaaaatgtcaagtgaagagcaccaacccctac
agcctctactatcccagcagtgccctggaaatgaataaaagtgaccatgagagtgtggac
cgcgagctggagatgctgaatgaagaactgcgcactatagaattggagtgtctgaatatc
gtgagagctcacaaaatgcagcagctcaaggagcaatacagagagtcctggatgctccac
aatagcgggttccgcaactataacaccagcattgacgcccggagacacgagctctcagac
atcaccgaactccccgagaagtcagataaagacagctcgagtgcgtacaacacaggcgag
agctgtcggagcaccccgctgaccctggagatctcccctaataactcactgcatcgaatt
gcagaaaccgtgggctgccaaggcagtgaaggggcagtgagcagtggcgcagcaaacaag
gcaacccagaagaacctgctagccattaccgagagtcaggacaccgacgaggtcaagtat
ggcccctctcccaaggatcttgaccttagcaagcagctggaaaacaaagaccaaaaaacc
ggtgatggaagcaaaagtcccactcaagttccaaaatttgggggctcctacctttcatct
taccacaactctccctataaacacgctcacatccctgctcacgccaaacattatcagagc
tacatgcagctgatccagcagaaatctgcagtggagtacgcccagagccagatgagcctg
gtgagcatgtgcaaagacttgaattcctccaatcaatcagaacccagaatggaatggaaa
gtgaagataaggagcgatggaacccgctacatcaccaagaggcccgtcagagacaggctc
ctgcgagaacgagccctcaagatcagagaagaacggagcggcatgacaactgacgatgat
gccatcagtgaattgaagatgggccgttactggagcaaagaagaacgcaaacagcatgta
gtgaaggccaaggagcaaaggagaaggcgtgagttcatgatgcagagcaggttggattgt
ttgagagagcagcaaggggcagaagaaaagaaggaaatgaatatcattgaactaagtcac
aaaaaaatgatgaagaaaagaaacaagaagatctttgacaattggatgacaattcaagaa
ctactaacccacggcacaaagtcgcccgacggcagtagggtgtacaattccttcttatca
gtgaccacggtataa
DBGET
integrated database retrieval system
