Ornithorhynchus anatinus (platypus): 100091506
Help
Entry
100091506 CDS
T01045
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oaa03009
]
100091506 (IGHMBP2)
03012 Translation factors [BR:
oaa03012
]
100091506 (IGHMBP2)
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100091506 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
100091506 (IGHMBP2)
Ribosome biogenesis [BR:
oaa03009
]
Eukaryotic type
Other ribosome biogenesis factors
100091506 (IGHMBP2)
Translation factors [BR:
oaa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100091506 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
Viral_helicase1
AAA_16
AAA_22
Helicase_RecD
nSTAND3
DEAD
SLFN-g3_helicase
ResIII
IstB_IS21
AAA_25
UvrD-helicase
Herpes_ori_bp
AAA
Flavi_DEAD
AAA_33
UvrD_C_2
AAA_18
PhoH
NTPase_1
NPHP3_N
bpMoxR
cobW
Motif
Other DBs
NCBI-GeneID:
100091506
NCBI-ProteinID:
XP_028916294
Ensembl:
ENSOANG00000036508
UniProt:
A0A6I8NU52
LinkDB
All DBs
Position
3:complement(160752..185495)
Genome browser
AA seq
1091 aa
AA seq
DB search
MAAAEAFVSRQLGLLQEERQAEIDESRSWQKNVSLKELQRRGVCLLKLHVTSQRTGLYGR
LLVTLEGRKRGSGSGLPANSFGPGDIVGLCTAASEDAEQARGVVTRLTSEAVTVAFEEPP
GGQLSLDPESTFSLLRLANDVTYKRLKKALTRLNQYHSGPASCLIDVLFGSSEPSDPTQN
RPTVFFDEALDASQREAVTFALAQREVAVIHGPPGTGKTTAVVEVVRQAVRQGLKVLCCA
PSNTAVDNLVERLAGHHERVLRLGHPARLLDSTVRHSLDAVLARGDGAQLVADIRKDIDR
ALAQTRKTQDKGEKQHLRSEVKVLRKELREREEAAMLETLTRASVVLATNTGASADGPLK
LLPDDYFDLVVIDECAQALEAGCWIPLLRARKCVLAGDHQQLPPTILSQKAATQGLAVSL
MERLVEERGESVVRMLTVQYRMHQAIMQWASQEMYDGRLTAHPSVAGHLLRDLPGVASTE
ETGTPLLLIDTAGCGLLELEQEDEQSKGNQGEVRLVGLHVQALVEAGVRAADIAVIAPYN
LQVDLLRQDLMPKHPELEVKSVDGFQGREKEAVVLSFVRSNRKGEVGFLSEARRINVAVT
RARRHVAVVCDSRTVGTHPFLKRLVDHLSAHGEVRSAFEYLDDLVPGNYAGDGRQGRVPG
PTAPTPPGAPASSRARQGGGPRAVPTRRPRRGNPLAQTPQSTGPGSTSHAPGGLVVGDAA
EAEAEVREALGRWRATVLKFLESRESRLEFPPSLSSHDRLLLHQIAQELGLRHESQGQGR
KRFLTISRIEPPAEPHAETPAETSAESAVSPAESAVSSDDPVLPSARERFPPGSPPPGEQ
PPPGPSPVGKQSLPEPPPAGECPPPGPSLLGEQPPPGPPPAGERPPHGPSTPGECPLPGP
PPAEERPQPGPPLASPRDPVNLKALHLERMRRRAALQETVKLLPPGTLRPLVAAGQEKKG
ARGRTEKAGAVAASPGEEDFDELVAAAMKADRTCAFPKCRASTATLGFLCLHCNRRYCPA
HHVPEVHGCGERARACARRRASREAAAATSGSGPKARGLDSTQRACLQRKLDKKLSALTD
QRKTKKWDKEK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggccttcgtgtcccgccagctgggcctgctgcaggaggagcgccaa
gcggagatcgacgagagcaggagctggcagaaaaatgtctcgctcaaggagctgcagcgt
cgaggcgtgtgcctgttgaaactccatgtgaccagccagaggacggggctgtacggccgg
ctgctggtgaccctggagggccggaagcggggctctggctcggggctgcccgccaacagc
ttcggccccggcgacatcgtgggtctgtgcaccgcggcgagcgaggatgctgagcaggcc
aggggggtggtgacccggctcacctctgaggccgtcactgtggcatttgaggaaccacca
gggggccagctgagtttggacccagagagcacattcagcctgctccgcctggccaatgat
gtcacatacaagcggctaaagaaggctttaacccggttgaaccagtaccattccggtccc
gcatcctgcctgattgatgttctcttcggctcatctgagcccagtgaccccactcagaac
cgccccaccgtgttcttcgacgaggcccttgatgcatcccagagggaggccgtgaccttt
gccctggcccagagggaagtggctgtgatccacggtcctccgggcacggggaagaccacg
gctgtggtcgaggtagtgcgacaggccgttcgccaaggcctcaaggtgctgtgctgtgcc
ccgtccaacaccgcggtggacaacctggtagagcgcttggccgggcaccacgagcgggtg
ctgcgcctgggccacccggcccgcctgctggactccaccgtgcggcactccctcgacgcc
gtcctggctcgtggcgacggcgcccagcttgtggcggacatcaggaaggatatcgaccgg
gctttggcccaaacgcggaagactcaagacaagggggagaagcaacacctgcggagtgaa
gtgaaggtgctgaggaaagaactgagggagcgggaggaggcggccatgctggaaaccctc
actagggccagcgtggtgctggccacaaacacgggggcttctgccgacgggccgctgaag
ctgctgcccgacgactacttcgacttggtggtgatcgacgagtgcgcgcaggccctcgag
gccggctgctggatccccctgctcagggcccgcaagtgcgtcctggctggagaccaccag
cagctgccccccaccatcctctcccaaaaggcagccacacagggcctggcagtcagtctg
atggagcgcctcgtggaggagcggggcgagagcgtggtacgcatgctcaccgtgcagtac
cgcatgcaccaggccatcatgcagtgggcctcccaggagatgtacgatggccggctcact
gcacacccgtccgtcgccggtcatctcctgagggacctgcccggcgtggcctccaccgag
gagacggggaccccgctgctgctaatagacactgcaggctgtggcctgctggagctggaa
caggaagatgagcagtccaaaggaaatcaaggggaggtccgccttgtcggtctacatgtc
caggcgctggtggaggctggtgttcgagcagctgacatcgccgtcatcgccccgtacaat
ctccaggtggatctgctcaggcaggacctcatgccgaaacaccccgagctggaagtgaag
tccgtggatggctttcagggaagagagaaggaggctgtcgtgctgtccttcgtcaggtct
aatagaaaaggggaagtgggttttctgtccgaagcccggcggatcaacgtggcagtgact
cgggcccggagacacgtcgcggtggtctgcgactcccgcaccgttggcacccaccccttc
ctgaagagactggtggaccacctgtcggcccacggggaggtccgctcggccttcgagtac
ctcgacgacttggtgcctgggaactatgctggagacggccggcagggccgagtcccgggc
cccaccgccccaactcccccgggggccccggcctccagcagggcacggcaagggggtggc
ccgagagccgtccccacccggagaccccgcagggggaatcctctggcccagacgccccag
agcacgggtcccgggtccacgagccacgcacccggcggcctggtggtgggggatgccgca
gaggctgaagcggaggtgagggaggccttggggaggtggcgggcaaccgtgctgaagttc
ctggagagccgcgagagccgcctggagtttcccccgtccctcagctcccatgaccggctg
ctgctccatcaaatcgcccaagagctgggcctgaggcatgagagtcaaggacaagggagg
aagaggttcctcaccatcagccgcatagagcccccagctgagcctcatgctgagacccca
gctgagacctccgctgagtctgctgtgtcccccgctgagtctgctgtgtcctcagatgat
cccgtgctcccttccgccagggagcggttcccacctggatctccacctcctggggagcag
cccccacccggaccatcacctgtcggaaagcaatccttgcctgagcctccacccgccggg
gagtgtcccccacccgggccttcactccttggagagcagcccccgcctgggcctccacct
gccggggagcgtcccccacacgggccttcaactcccggggagtgccccctaccaggacct
ccacccgcagaggagcggccccagcccggccctcccctagccagcccccgggaccccgtg
aacctgaaagccctgcacctggagaggatgaggagacgagccgctctgcaggaaaccgtc
aaactgctgcctcctgggactttgaggcccctggtggcagcaggccaggagaaaaaggga
gcccgagggcgaacggaaaaggcaggagcagtggcggccagcccgggggaagaagacttt
gacgagttggttgctgctgccatgaaggcggacaggacgtgtgcattccccaagtgccga
gccagcactgccaccttgggtttcctctgcctgcactgtaatcgtcgctactgccccgca
caccacgtcccagaggtgcacggttgcggggagagggcccgagcctgtgcccgccgcagg
gccagcagagaggcagccgccgccacctccggcagcggccccaaggcccggggtctggac
tccacccagcgggcctgcctccagaggaaactggacaagaagctcagtgcattgactgac
cagaggaagaccaagaaatgggacaaagagaaatga
DBGET
integrated database retrieval system
