Ornithorhynchus anatinus (platypus): 100092816
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Entry
100092816 CDS
T01045
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03082
ATP-dependent chromatin remodeling
oaa04714
Thermogenesis
oaa05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100092816 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100092816 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100092816 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100092816 (SMARCA4)
03036 Chromosome and associated proteins [BR:
oaa03036
]
100092816 (SMARCA4)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100092816 (SMARCA4)
Chromosome and associated proteins [BR:
oaa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100092816 (SMARCA4)
Chromatin remodeling factors
BAF complex
100092816 (SMARCA4)
PBAF complex
100092816 (SMARCA4)
GBAF(ncBAF) complex
100092816 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
100092816
NCBI-ProteinID:
XP_028908554
Ensembl:
ENSOANG00000004355
LinkDB
All DBs
Position
X2:complement(10021692..10120399)
Genome browser
AA seq
1641 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPPQG
PGGYPQDNMHQMHKPMDSMHEKGMSDDPRYNQMKGMGMRSGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMASGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPGPGPGPGQGP
GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPDGPLANAAAPSSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPTLPVDEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHST
GSGSASFAHTAPPPMCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRR
REEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLT
EKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDTGSSTPTTSTRSRDKDDDSKKQKKRG
RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPV
DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIE
KEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSRAKPVV
SDDDSEEEQEEDRSGSGSEED
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatccgcccctgggaggcacacctcgaccaggaccgtctccaggacct
ggcccgtctcctggtgctatgttaggcccgagtcctggcccttcacctggctctgcacat
agcatgatgggccccagccctgggccaccttcagcaggacaccccatacctcctcagggg
cctggaggctaccctcaagacaacatgcatcagatgcataagccaatggattccatgcat
gagaaagggatgtcagatgatcctcgctataatcagatgaaagggatgggaatgagatct
ggaggacattcggggatgggtcctcctccaagcccgatggatcaacattctcaaggttac
ccttctcctctcggtggctcggagcacgcatccagtccagttccagctaatggcccatcc
tcaggtccccagatggcatctggccccggcggggttccgttagatggtactgacccccag
gcattaggacaacagaaccggggcccaactccttttaaccagaaccagctgcaccagcta
agagctcaaatcatggcttacaaaatgctagctagagggcagcctttacccgaccatctg
cagatggcagtgcaggggaaaagaccaatgcctggaatgcagcagcaaatgccaacacta
cctccaccttccgtatctggcaccggaccaggcccgggccctggacctgggcagggtcca
ggcccagcacctccaaactatagcagacctcatggtatgggagggcccaacatgccccct
cctggcccctcaggagttcccccaggaatgcctggacagcctcccggtggacccccaaag
ccctggcctgacggacccctggcaaatgccgcagcaccctctagcacacctcagaaattg
attcctcctcaaccaacgggccgtccttcaccagcacccccggccgtacctcctgcagcg
tcccccgtgatgcccccccagacgcagtcccccggacagccagcccagccagctcccatg
gtccagctccatcagaaacaaaaccgaattactcccatccagaaaccaagaggacttgac
cccgtggaaattttacaggagcgagaatacaggctgcaggctcgcattgcccatcgaatc
caagagcttgaaaatcttcctggctccctggctggtgatttgagaaccaaagctaccatt
gaactcaaagcactccgactgcttaactttcaaagacagctgcgtcaggaagtcgtggtg
tgcatgagaagagatacagccctagaaacggccctgaatgccaaggcgtataaacgcagt
aagcggcagtccctacgtgaggctcggatcacagagaaactggagaaacagcaaaagatt
gaacaagaacggaaacgccgacagaagcaccaggaatacctcaacagcattcttcagcat
gccaaggacttcaaagaataccatcgatcggtcactggcaaaattcagaaacttacaaaa
gcagtggctacttaccatgccaacacagaacgggagcagaagaaggaaaacgaaagaatc
gaaaaggaaagaatgcggagactgatggccgaagatgaagaaggataccgtaagctcatc
gatcagaagaaagataaacgtttggcatacctacttcagcagacagacgagtatgtggct
aacctcaccgaactggtccgacagcacaaggctgctcaggtggcaaaggaaaaaaagaag
aaaaagaaaaagaagaaggcagagaatgcagaagggcagactcctgcaattggaccggat
ggcgagcctctagacgaaaccagccagatgagtgatctaccagttaaagtgattcacgtc
gaaagtggaaaaatacttactggtacagatgctcccaaagcaggacagctggaagcctgg
ctggaaatgaatccaggatacgaagtagctccaagatcagacagcgaggaaagtggctca
gaagaagaggaagaggaagaggaagaagaacagccacagcctgctcagcctactcttccg
gtggatgaaaagaagaagatcccagatcctgatagcgacgacgtctctgaagtggatgca
agacacatcattgaaaacgctaaacaagatgttgatgatgagtatggcgtctcccaggct
cttgcccgtggtctgcagtcatattatgctgtggcccatgccgtcactgaaagggtggac
aaacagtccacacttatggtcaacggtgttctcaaacagtaccagattaaaggtttggag
tggctggtatcgctgtacaacaataacctgaatggaattctagccgacgaaatgggtctg
ggcaaaaccatccagactattgctttaattacatacctcatggaacacaagcgtatcaac
ggacccttccttatcatagttcctctctccactctgtcaaactgggcgtacgaatttgat
aaatgggctccttctgtggtgaaggtctcctacaagggctctccagcagcaagacgtgct
tttgtacctcagcttcgaagtggaaagtttaatgtcttgctcactacgtatgagtacatc
attaaagataaacatattcttgccaagattcgctggaagtacatgattgtagatgaaggt
cacaggatgaagaatcatcattgtaagctaactcaagtcctcaacacacactacgtagct
ccacgccgtttgctgctaacaggcactccactacagaacaagctacctgaactgtgggcc
ctgctcaatttcttgctgcctaccatcttcaagagctgcagtaccttcgagcagtggttt
aatgctccttttgccatgacgggagaaaaggtggacctgaacgaagaagaaactattctc
attatccgccgtttacacaaagttctacgtcccttcctcctcaggcgattaaagaaagaa
gtagaagctcagttgcctgaaaaggtggagtatgtgatcaagtgcgacatgtctgcgtta
cagcgggtgctgtaccgacatatgcaggccaaaggagtgctgctcaccgatggatccgag
aaagataagaagggcaaaggaggcaccaagaccttgatgaacactatcatgcagctgagg
aagatatgtaaccacccttacatgtttcagcacatagaggaatctttttcagagcacttg
ggatttactggaggcattgtccaaggacttgatttataccgagcctctggcaaattcgaa
ctcttggacagaattcttcccaagctgcgtgcaaccaaccataaagttctcctcttctgt
cagatgacctccctcatgactatcatggaagattattttgcatatcgtggcttcaaatac
ctcaggctggatggaaccactaaagctgaagatcgtggcatgttgctaaaaaccttcaat
gagccaggctctgaatatttcatttttctgctgagcactcgggctggggggctgggcctg
aacctccagtccgctgatactgtgatcatttttgacagtgactggaatcctcaccaggac
ttgcaggcccaggaccgcgcccatcgtatcgggcagcagaacgaggtacgtgtcctccgt
ctctgcacggtcaacagtgtggaagagaagatccttgctgcggccaagtacaaactgaat
gtcgatcagaaagtgatccaggctggtatgtttgaccagaagtcctccagccacgaaaga
agagctttcctgcaagcgattctagagcatgaggagcaggatgagagcagacacagcacg
ggcagcggcagtgcaagcttcgcccacactgcccctccgccaatgtgcctcaaccccgac
ttggaggaaccacctctaaaggaagaagatgaggttcccgacgacgaaacagttaaccag
atgatcgcgcgacacgaagaggagtttgaccttttcatgcgcatggatctggaccgcaga
cgggaggaagcccgcaatcccaaaagaaagccacgcctgatggaggaagatgagcttcct
tcttggattattaaggatgatgccgaagtggagaggctgacctgtgaggaggaggaagaa
aaaatgtttggccgcggctcccgccatcgtaaagaagtggactacagcgactcactgact
gagaagcagtggctcaaggcaatagaagaaggcaccctggaggaaatagaagaggaggtt
cgtcagaagaaatcatcccgcaagcgcaaacgtgacagcgacactggttcttctactcca
actaccagcacccgcagccgggataaagatgatgatagcaaaaagcagaagaaacgaggc
aggcctcctgctgaaaagctctctcctaaccctccaaacctaaccaaaaagatgaagaag
atagtcgatgctgtgatcaaatataaagacagtagtggacgccaactaagcgaggtattc
atccagcttccttctcgcaaagaactgccggagtactacgagctcatccgcaaaccagtg
gactttaagaaaataaaggaacgtatccgcaaccacaagtatcgtagcctgaatgacctg
gagaaggatgtgatgctcctctgtcagaatgcgcaaacatttaatttggagggctccttg
atctatgaagactcaattgttctgcagtccgttttcaccagtgtgagacagaaaattgaa
aaggaagatgatagtgagggggaagaaagtgaagaggaggaagaaggagaagaagaagga
tctgaatctgagtctcgctctgtcaaagtgaagatcaaattaggcaggaaggaaaaagca
caagaccggctgaaggggcgaagacgcactagccggggatctcgggccaaaccggtagtg
agtgatgatgatagcgaagaagagcaagaggaggatcgctcaggaagtggcagtgaggaa
gattaa
DBGET
integrated database retrieval system
