Ornithorhynchus anatinus (platypus): 100092994
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Entry
100092994 CDS
T01045
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03013
Nucleocytoplasmic transport
oaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100092994 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100092994 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100092994 (THOC1)
03041 Spliceosome [BR:
oaa03041
]
100092994 (THOC1)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100092994 (THOC1)
Spliceosome [BR:
oaa03041
]
Complex C
Other components
EJC/TREX
100092994 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100092994 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
100092994
NCBI-ProteinID:
XP_028922342
Ensembl:
ENSOANG00000008228
LinkDB
All DBs
Position
5:complement(81740452..81782207)
Genome browser
AA seq
658 aa
AA seq
DB search
MSPSPPLFSLPEARTRFTNSARDALSNKSIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
DLIINQASCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENITVFNTNEQESTLGQKHVEDKEEGMEVEEGEMGDDEVPTNCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFRSYKLDDTQASRKKLEELKAGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPSDPKPPRLVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDGLLKENSESPDARRDKPVTGEQIELFANKLGEQWKILAPFLEMKDPDI
RQIESDSEDVKMRAKQLLVAWQDQEGIHATPENLITALNKSGLSDLAESLTNDSEASS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtccccgccgctctttagtttgcccgaagcgcggaccagattcacgaattcc
gccagagacgccctgtcgaacaaaagcatcaagcctttattgaacacgttcagccagttg
cctggaagtgaaaatgagaaaaaatgtaccctcgatcaagctttcagaggcgttttagaa
gacctgattataaaccaagcatcctgtgaaaatgttttggctattatctcccttgctatt
ggtggagtcactgaaggtatttgcacagcttccacaccctttgtgctcttgggagatgtc
ttggattgccttcctttggatcagtgtgacacaattttcacctttgtggaaaaaaatgtt
gctacttggaaatcgaataccttttattctgccggaaagaactatttactgcgcatgtgc
aatgatctcctaagacgattgtccaagtcccagaatactgttttctgtggaagaattcag
ctcttcttagccaggcttttcccattgtcagagaaatcaggtcttaatttgcagagccag
tttaatctggaaaatatcactgttttcaataccaatgagcaagagagtaccttgggtcag
aagcacgttgaggataaagaagaagggatggaagtagaagaaggtgaaatgggagatgac
gaagttcccacaaattgctccattccaatagactacaacctttatagaaaattctggtca
cttcaagattacttccgaaacccggtgcagtgctatgagaaggtttcttggaagactttc
ctgaagtattcggaagaggtcttagccgtttttcgaagttacaaactggatgatactcag
gcctcaagaaagaagttggaagagttgaaagcaggaggggaacatgtatattttgccaaa
ttcctaaccagtgaaaagctgatggatttacagctcagcgacagtaatttccgtcgtcac
atcttgctgcagtatctcattttatttcagtatcttaaggggcaggtcaaattcaaaagt
tctaactacgtgctaactgacgagcagtccctctggattgaagatacaaccaaatcggtc
tatcaactgctgtcagaaaaccccccggatggagaaaggttttcaaaaatggtagagcat
attttaaacaccgaagaaaattggaactcatggaaaaatgaagggtgcccaagttttgtg
aaagaaagaccatctgatcccaagcccccgaggcttgttcgaaagagaacggctccagag
gatttcctagggaaaggacccaacaaaaaaattctgatgggaaatgaggaattaacaaga
ctttggaatctctgtcctgataatatggaagcctgtaaatcagaaagcagggaatacatg
ccaaccctggaggagtttttcgaagaagcgattgaacaggcggaccctgaaaacatggtt
gaaaatgaatacaaagctgtgaacaattccaattacggctggagagccctgaggctgcta
gcccgcagaagtccccactttttccagccaaccaaccagcagtttaagagtctaccggag
tatttggaaaacatggtgatcaaactagcaaaggaattaccacctccatctgaagaaatc
aaaacgggtgaggatgaagacgaggaagacaatgatggtttactaaaggagaacagtgaa
agccccgacgcccggcgcgacaaaccggtcacgggggagcagatcgagctgtttgctaac
aagcttggagaacagtggaaaatcttggctccgtttttagaaatgaaagaccctgacata
aggcagatagaatccgacagcgaggacgtgaagatgagagctaagcaactgcttgttgcc
tggcaggatcaagagggaatacatgccacacctgagaatctcattaccgcgctgaacaaa
tctggattaagcgaccttgccgaaagtctaaccaatgactccgaagcgagtagttag
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