Ornithorhynchus anatinus (platypus): 100681555
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Entry
100681555 CDS
T01045
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oaa03021
]
100681555 (TAF1C)
Transcription machinery [BR:
oaa03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100681555 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
100681555
NCBI-ProteinID:
XP_028917015
LinkDB
All DBs
Position
3:complement(51922589..51937839)
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AA seq
927 aa
AA seq
DB search
MDFPPSLFPTFVTPGPPVPAEPPVPPPIPGRADCIRLQPAWTAGPAADPRFEASHTATGD
TWRAETPHPLPLLLPGSGWDPGLTPQDLLFRRPLKRQAGVGAGTTVAVDFTEQLDRFFWD
HGDVAFGPYGKLMQDDFTLVQLRGRQKRNTGRVWHLLQDLSDHQPWGCPRAHVTHRQRRF
SRMLRPMLEKDLAGELLGNLLQEELAGCWRRLLFDETPTGGSLGWFPGPRGGQLVYPAGS
TADELYFQDITLSSAGTPQAHGAPIRVRLRGPVRQVVTGTVQGEALAAVRSDHHCAVWRL
RRMGKLTPLQVLATETEATSLALSPHLPGELTVCTCAGAVYLWNLQNGLQRVRRSTETLA
FQDPSPWRWADFTAHPRVLTIADRTGVDTADIRVPLSCGQHLFRVGAEAACQQGERVLLL
RHLAPHLPTLHLVLTQFSLYLLDERLPLVPMVKWDHGLPSAPHLAQLLPPQNTKGHHPLL
LGGSGGELRLLQISGKSGSPPQITGPPLALPSLADALPDFPPAEPHSHHLLKERLRAPAT
GLAAASGLPGPPCSLLIFQLSAAGDVFYHRLLHRSEADTSKGTGEATGPGPNSDSSGTCA
VDHDSSLGTDPDPEIKAASNPSALSGQAPFSDDGDSQAADCWQRWLSTLLQGASHPPQPP
WAPPTFARRRLLPLKQRGASSSVAAAARSGLLVAMAEGQLLHPKDLGLAPTQHTPAPGPL
PSGCSNDLNERLGAAWEGEGRAWWEARQAGARKERAQRLLERRRQAKRRQPRPRLSSSFS
YSVCSFSARSDLSDYHSRSPFTAHSSPAHTAPSSPAHMPPGSPAYTLSSPAGSTPRPASR
SLSKASKTSSSLPFSVGQVPGLPRERLRVLQNYLAALPESQAPFSVSPSPYPSLEPNTVL
SQDPSVRTQPPSSLSSQPQKKRSRMGF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccccgagcctgttccccaccttcgtgacccccgggcctcccgtcccggcc
gagccgccggtgccgccccccatccccggccgggccgactgcatccgactgcagcccgct
tggacggcgggcccggcggccgacccccggttcgaggcgtcgcacacagcgacgggggac
acgtggcgggcagagactcctcaccccctcccccttctgctacctggctcaggatgggat
cccggtctgacaccccaagatctccttttccggcggcctctgaagcgtcaggcaggggtc
ggagctgggaccacggttgcagtggactttacagagcagctggacagatttttctgggat
catggtgatgtggccttcggaccctatgggaagctgatgcaggatgacttcacgctggta
cagctgaggggtcgccagaaaagaaatacaggcagagtgtggcacctgctccaagatctg
agtgatcaccagccttgggggtgtccccgggcccacgtgacccatcggcaacgtcgattt
tcccgcatgctgaggccgatgctggagaaagaccttgctggggagctgctgggaaatctg
ctccaggaggagctagcaggatgctggcggcgattgctctttgatgaaacccccaccggg
gggtcacttggctggtttccaggacctcgtggtggccaactggtctaccctgcagggagc
actgcagatgaactttatttccaggacatcacactgtcttcggctggaaccccccaggct
catggagctccaatccgcgttcgactccgcgggcctgtccggcaggtggtgactgggacc
gtccagggggaagccctggcagccgtgaggtccgatcaccattgtgccgtatggaggctt
cgcaggatggggaaactgacgcccctccaggtgctggctacagagacggaagccacatcc
ctggccctcagccctcaccttcctggcgaactgaccgtctgcacctgtgcaggagctgtc
tacctgtggaacctgcagaatgggctccagcgggtccgcagaagcactgagaccttggct
tttcaagacccatcaccctggcgctgggcagacttcactgcccatccgcgggtgttgacc
attgctgaccgcactggagtggacactgcagacatcagggtccccctaagttgtggccaa
cacctgttccgtgtgggcgcagaggctgcatgccagcaaggagagcgggtattgctgctg
cggcacttggcaccccacctccccacgctgcaccttgttctgacgcagttctcactgtac
ctgctagatgaacgtctgcccttagtgccgatggttaaatgggaccatggactcccttct
gcacctcacctggcccagctgctgcctcctcagaacactaagggccatcaccctctcctt
ctgggagggtctggaggagaactgcggctgctgcagatctcaggcaaaagtggttctccc
cctcagatcactggacccccactggctctcccgtcgctggctgatgccctccctgacttc
ccaccagccgaacctcacagtcaccatttgctgaaggagagattgcgggctccagctaca
ggccttgctgctgcctctggcctccctgggcctccgtgctctttgctgatcttccagctc
tccgctgctggcgatgtcttctatcatcgtctgctacaccggtcagaggccgacaccagc
aagggcaccggggaggccaccggccctgggccaaacagcgactcttccggaacctgtgcc
gtcgatcacgactcaagcctggggactgaccctgaccctgagatcaaagctgcttccaac
ccctctgccctttccgggcaggcccccttctctgatgatggggactcccaagccgctgac
tgctggcagcgttggctgagcaccctccttcaaggtgcctctcaccctcctcagccccct
tgggcccccccaacttttgcccgacgaaggcttcttcccctgaagcagcggggagcctca
agctcagtggcagcggcggcccgtagcgggcttcttgtggccatggctgaggggcagctg
ctgcacccaaaggatctgggcctggctcccactcagcacaccccggcccctggacccctg
cccagcggttgcagcaatgacctgaacgaacgtctgggagcagcctgggagggcgagggc
cgagcatggtgggaagctcggcaggctggggcccgcaaggagagggctcagcggctgctg
gagcggcgacggcaagcaaaacgaaggcaaccccggccccgcctctccagctctttctcc
tactctgtctgctctttcagtgcccgctctgacctctcagactaccacagtcgttccccc
ttcaccgcccacagcagccccgcccacactgcccccagcagccctgcccacatgcccccc
ggcagcccagcctacaccctcagcagccccgctggcagtacccctcggccggcctccagg
agcctctccaaggcctctaaaacctcctcctctttgcccttctcagtgggccaggtcccg
ggcctcccccgggagcgcttgcgagtgctccagaactatctggctgccctaccagagtcc
caggccccattttccgtctctccttctccctaccccagcctggagcccaacacagtcctt
tcccaggaccctagcgtcagaacccagcctccttcctccctttcctcacagccccagaag
aagagatcccgtatgggcttctga
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