Ornithorhynchus anatinus (platypus): 103166467
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Entry
103166467 CDS
T01045
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04120
Ubiquitin mediated proteolysis
oaa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103166467 (SYVN1)
04120 Ubiquitin mediated proteolysis
103166467 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oaa04121
]
103166467 (SYVN1)
Enzymes [BR:
oaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103166467 (SYVN1)
Ubiquitin system [BR:
oaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103166467 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
103166467
NCBI-ProteinID:
XP_028914914
Ensembl:
ENSOANG00000045909
LinkDB
All DBs
Position
3:6995499..7001885
Genome browser
AA seq
610 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLVVLLGVLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTVFIKYVLHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQATDNVCIICREEMVA
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSQPPPEPPEPGPQAPPQPP
LLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPAPPPSGAADAAAPSAAGEPDRGGGGRPL
EGRGGGPATAPRGGGTAAPDQPPAPPGFPFPPPWMSVPLPPPFGFPPMPVPPAGFAGLTA
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPPAPPGPTAAT
VASASSSVPSSEAATPSAGSEPPPSEPARTTPPPPASEGPGAEAATEDGEPDTEELRRRR
LQKLGSPVSH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggcggtgatgatggcggccagcctggcgctgacgggggccgtggtggcc
cacgcctactacctcaagcaccagttctacccgacggtggtgtacctcaccaagtctagc
cccagcatggccgtcctctacatccaggccttcgtcctcgtcttcctcctgggcaaggtg
atgggcaaggtgttcttcgggcagctgcgggccgccgagatggagcacctcctggagcgc
tcctggtacgccgtcaccgagacctgcctggccttcaccgtcttccgggacgatttcagc
ccccgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgggtggacttcatggagcgtagccccaacatctcgtggctcttccactgccgc
atagtctctctcgtggtcctcctcggggtgctggacttcctgttcgtcagtcacgcctac
cacagcatcctgacccgcggggcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgatgaccatggtcctcaccgtcttcatcaagtacgtgctgcactccatcgacctccag
agcgagaacccgtgggacaacaaagccgtgtacatgctgtacacggagctcttcacaggc
tttatcaaggtcctgctctacatggccttcatgaccatcatgatcaaggtgcacacgttt
cccctctttgccatccggcccatgtacctggccatgaggcagttcaagaaagcggtcacg
gacgccatcatgtcccgccgggccatccgcaatatgaacaccctgtacccggacgccacc
cccgaggagctccaggccacggacaacgtgtgtatcatctgccgggaggagatggtggcc
ggagccaagcggctgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacgtgccccacctgccgcatggacgtcctgcgggcgtcgctcccggcc
cagtcgcagccgccccccgagcccccggagccggggccccaggctcccccgcagcccccg
ctgctgcctcagccccccaacttcccccaaggcctcctgcctccctttcctccgggcatg
ttccccctgtggcctcccatgggccccttccccccggcgccgccccccagcggcgccgcc
gacgccgccgccccctccgccgcgggtgagccggaccgggggggcggggggcggcctctg
gaggggcggggaggggggcccgcgaccgccccacgaggcggcggcacggccgcccccgac
cagccccccgcgccgccgggcttccccttccccccgccctggatgagcgtcccgctgccc
ccgcccttcgggttccccccgatgcccgtgcccccggcgggcttcgcggggctgacggcc
gaggagctgcgggccctggagggccacgagcgccagcacctggaggcccggctgcagagc
ctgcgcaacatccacaccctgctggacgccgccatgctgcagatcaaccagtacctcacc
gtgctcgcctccctcgggcccccccggcccccggccccacccggccccacggcggccacg
gtcgcctccgcctcctccagcgtgcccagctctgaggcggccaccccctccgccgggtcc
gagcccccgccctccgagccggcccggaccacgcccccgccacccgcgtcggaggggccg
ggcgcggaggcggcgacggaagacggagagcccgacacggaggagctccgccgccggcgg
ctgcagaaactggggtctcccgtctcccactga
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