Ornithorhynchus anatinus (platypus): 103166658
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Entry
103166658 CDS
T01045
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103166658 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oaa03000
]
103166658 (SOX17)
Transcription factors [BR:
oaa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103166658 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
103166658
NCBI-ProteinID:
XP_028925260
LinkDB
All DBs
Position
7:complement(10240456..10242945)
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AA seq
407 aa
AA seq
DB search
MSSPDAGYASDDQSQARCALPMMMPAALGPCPWAEALSPLGDVKAKGESGGAAGAGGGGG
GGGRGKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPF
VEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLHGLPDGPGPGLGPDGCGPADG
LGLHYHEQGYRPGPGPLAPALGPFRDCPGLAGPHFDGYNLPTPEASPLDGVEPDPAFFAA
SLQGDCPTAPYGYPAPGPDYPGPPDPPAPPGPGHPRPGPDPPAHALAGLLGPASPLHVYY
GQMGPAGAGGGRGYAAQAPAGPGQPSPPPEGLPGREGLDPAQPAELLADLDRTEFEQYLH
FVCKPDLGLPFAPHDGGLALPDGGHGAISSVVSDASSAVYYCNYPDV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcgacgaccagagccaggccaggtgcgcgctg
cccatgatgatgcccgccgccctgggcccctgcccctgggccgaggccctgagccccttg
ggggacgtgaaggccaagggggagtcggggggcgcggcgggggccgggggcggcgggggc
ggcgggggccggggcaaggccgagtcccgcatccgccggcccatgaacgccttcatggtg
tgggccaaggacgagcgcaagcggctggcccagcagaacccggacctgcacaacgccgag
ctgagcaagatgctgggcaagtcgtggaaggcgctgtctctggcggagaagcggccgttc
gtggaggaggcggagcggctgcgggtccagcacatgcaggaccatcccaactacaagtac
cggccgcgacggcgcaagcaggtgaagcgcctgaagcgggtggagagcggcttcctccac
ggcctccccgacgggccgggcccgggcctgggccccgacggctgcgggcccgcggacggc
ctcggtctccactaccacgagcagggctaccggccgggcccgggcccgctggcccccgcc
ctgggccccttccgcgactgcccgggcctggcggggccccacttcgacggctacaacctg
cccaccccggaggcgtccccgctggacggcgtggagcccgacccggccttcttcgccgcc
tccctgcagggggactgcccgacggcgccctacggctacccggccccggggcccgactac
cccgggccccccgaccctccggcccccccgggccccggccacccccggccgggcccggac
ccgccggcccacgccttagcggggctgctgggccccgccagccccctgcacgtctactac
ggccagatgggccccgcgggggcgggcggcgggcggggctacgcggcgcaggccccggcc
gggcccggccagccctccccgcccccggaggggctccccggccgggagggcctggacccg
gcccagccggccgagctgctggcggacttggaccggacggagttcgaacagtacctgcac
ttcgtgtgcaaacccgacttgggactgcccttcgcgccccacgacggcggcctcgccctc
ccggacggcggccacggggccatctcctccgtcgtgtcggacgccagctccgcggtatat
tactgcaactatcccgacgtgtag
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