KEGG   Ornithorhynchus anatinus (platypus): 103166937
Entry
103166937         CDS       T01045                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03008  Ribosome biogenesis in eukaryotes
oaa03013  Nucleocytoplasmic transport
oaa03015  mRNA surveillance pathway
oaa05014  Amyotrophic lateral sclerosis
oaa05164  Influenza A
oaa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103166937 (NXF1)
   03015 mRNA surveillance pathway
    103166937 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    103166937 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    103166937 (NXF1)
   05168 Herpes simplex virus 1 infection
    103166937 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103166937 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaa03019]
    103166937 (NXF1)
   03009 Ribosome biogenesis [BR:oaa03009]
    103166937 (NXF1)
Messenger RNA biogenesis [BR:oaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103166937 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     103166937 (NXF1)
Ribosome biogenesis [BR:oaa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    103166937 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 UBA_8 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 103166937
NCBI-ProteinID: XP_028917133
LinkDB
Position
3:15968909..15983334
AA seq 617 aa
MADDGKSYNEHDDRVGGNFPPRRRKGRGPFRWRPHESSQRPRNRGGPGPRAPRPEEDDGD
VAMSDAHEAPRGRFNPYARLNRRGDNWPERGRNERRDKNAQDRSGAGAAQDGSSKNWFKI
TIPYGKKYDKSWLLSALQNKCSVPFNPVEFHYENNRAQFFVEDASTAAALKAVNHKIADR
DNYRISVIINPSAPPQSVQNELKPEQVEQLKITMSKRYDGSQQSLDLKSLRSDPDLVTRN
INVVLNRKNCMVATLRIIEENIPELLSLNLSSNKLYRLDDLGDLVQKAPNVKILNLSRNE
LKSERELDKVKGLKLEELWLDENPLCDNFRDQSSYISAILERFPKLLRLDGHELPPPIAF
DVEAPTTLPPCKGSYFGSENLKAPVLHFLQQYYTIYDSGDRQGLLDAYHDGACCSLSTPL
SAQNPARSNLGEYIKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVD
ICAQTNTLLCFAVHGVFKEVDGKSRDSVRAFTRMFIAVPAGNAGLCIVNDELFVRNASTE
EIRRAFVMPAPTPSSSPVPTLSSDQQEMLQNFSTQSGMNLEWSQKCLLDNDWDYTRAAQV
FTQLKAGGKIPEVAFLK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggcggacgacggaaaatcctacaacgagcacgatgaccgcgtcgggggcaacttcccc
ccaaggagacggaaaggccgcggccccttccgatggaggccgcacgagtcgagtcagcga
ccccgcaatcgtggtgggcccggcccccgggcccctcgccccgaagaggacgacggtgac
gtggcaatgagcgatgcccacgaagctccccgcggccgatttaatccctacgctcgacta
aaccgtcgaggggacaactggcccgaacgaggccgcaatgaacggcgggacaagaacgcc
caggaccgaagcggggccggggccgcccaggacggctcctcgaaaaactggttcaaaatc
accattccctacggcaagaagtatgacaagtcgtggctgctgagcgccctccagaacaag
tgcagcgtccccttcaatcccgtggagtttcactacgagaacaaccgagctcagttcttt
gtggaagacgcgagcacggctgccgccctgaaggcggtgaaccacaagatcgccgaccgg
gacaattacaggatatcagtcatcattaatccatcggcccctccccagtcggtgcagaat
gagttgaagcctgagcaggtggagcagctcaagatcaccatgagcaaacggtacgatggc
tcccagcagtccctggacctcaagagcctccgttccgacccagatctggtaacccggaac
atcaacgtcgtcctcaaccgcaaaaattgcatggtggccacgctgcgcatcatcgaggag
aacatccccgagctgctgtctctgaacctgagcagcaacaagttataccggttggacgac
ctgggcgacctagttcagaaggcccccaacgtgaagatcctcaacctctcccgcaacgag
ctgaagtcggagcgggagctggataaggtgaagggattgaagctggaggagctgtggctg
gatgagaaccccctgtgcgacaacttccgggaccagtcctcgtacatcagcgccatcctg
gagcggttccccaagttgctacgactggacggtcacgagttgcctccgccgattgccttc
gacgtggaagctcccaccacgctccccccctgcaagggcagctactttggctctgaaaac
ctgaaggccccggtcctgcatttcctccaacagtattacacaatctatgattctggggac
cggcagggactgctggacgcttaccacgacggcgcctgctgctctctcagcacccccctg
agcgctcagaacccagcccggagcaatctgggcgaatacatcaaagacagcaggaacgtg
aagaagctgaaggatcccacgctgcgattccgactcctgaagcacactcgcctcaacgtc
gtggctttcctcaacgagctccccaaaacccaacacgacatcaactccttcgtggtggat
atttgcgcccagacgaacacgttgttatgctttgccgtccacggagtttttaaggaagtg
gatgggaaatcccgggactccgtcagagccttcacgaggatgttcattgccgtgccagcg
ggaaacgctgggctgtgcatcgtgaacgacgagctgttcgtacggaacgccagcacggag
gagatccgccgggctttcgtcatgcccgcccccaccccctcctccagccccgtccccacc
ctgtcctccgaccagcaggaaatgctgcagaacttctccacccaatccggcatgaacctc
gagtggtctcagaagtgcctcctggacaacgactgggactacacgagggcagcgcaagtc
ttcacccagctcaaggcagggggcaagatccccgaggtggcgtttctcaagtga

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