Ornithorhynchus anatinus (platypus): 103167298
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Entry
103167298 CDS
T01045
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103167298 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oaa04131
]
103167298 (VPS8)
Membrane trafficking [BR:
oaa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103167298 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
GED
WDR55
DUF5770
Motif
Other DBs
NCBI-GeneID:
103167298
NCBI-ProteinID:
XP_028921740
Ensembl:
ENSOANG00000036747
LinkDB
All DBs
Position
1:133085163..133376235
Genome browser
AA seq
1425 aa
AA seq
DB search
MENEPERERVESSACPFGPEDDLNRSLGQEASLLKFAYIDLDKELDLKPEPIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPSLLNIDTTDTHSYDTSSVASSDSGDRTNLKRRK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTTVGCQYGAISALSINSDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMEPSSVPLLAWHFVA
LQNSVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISDVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
SGQIFYLGTKSVHVMMLRSWRERVDHMLKQDCLTEALALAWSFHEGKAKAVVGLTGDAGK
RKAVVADRMVEILFHYADKALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYVLNDKLVGITAQVMKDLLVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENHLYDAMIYVYNSGMNEFISPMEKLFKVIAPPLSAGKSLTDEQVI
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIRMA
EKAEFYQICEFIYEREHQYEKIINCYLRDPLREEEVFNYIHDILSIPGYSVEEKQSVWRK
AMDRMEELVKLNPSKAAELVATHFMEQIEAVIQKLQNQFLLFQFLRSLLDPREGNHVNQE
LLQVSPFISEQFIELLCQYSPNQVRETLQVLECYRLEETIQITQKYQLLEVSAYLLEKKG
DVHGAFSVMLERLQSKLLELTHENETDPSLKDVEDVLGETIALCQRNSHSLNQQQREALW
FPLLEAMMAPQKLSDSGAPHPQTDSLKRLTMQVLNSMAAFIALPSILQRILQDPIYGKGK
LGEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLSNLRASITKGLNPKQDYCCICLQ
QYKRRQEMADEIIVFSCGHLYHSFCLLNKECGINTEGQIRWICYKCNSSNKAGKLSESAP
EMKKGRLTQAQAKVSPAYHSPRMDSAAKKGGSEPILDPQQIQAFDQLCRLFRGPSRLALL
TELSQTRRSESHGLLGAAQRGPAPYSVFQNENFQLHLTPPPLTED
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgagccagagcgtgaaagggtggaatcaagtgcctgcccctttggtcccgaa
gatgacctgaataggtcgctgggtcaggaggcctcgcttctgaagttcgcctacatagat
ctggacaaggaactggatcttaaacccgagccgattgacgacaaggagttcgatattcct
caagttgatacccctccaaccctggaaagcatcctgaatgagaccgatgatgaagacgag
tcctttgttcttgaagacccttccctgctaaacatcgacaccaccgacacccactcgtat
gacacatcgtcggtggccagctcagatagcggcgacaggaccaacctgaagaggaggaag
aaacttcccgattctttctcccttcatggatcagttatgcgacattcgcttttgaagggg
atttctgcccaaatagtctctgcagctgacaaagtagatgccggcttacctactgcaata
gcagtgtccagtctgattgcagtgggcacttcccatggattggcgctcatctttggaaaa
gatcagaaccaagctctgcggctctgcctgggcagcactaccgtggggtgtcagtatggt
gccatctccgctctcagtatcaacagcgactgctcaagacttctctgcggctttgcgaaa
ggacagatcaccatgtgggatctagccagcgggaaacttttgagatcaataacagatgct
caccccccaggaacagccattttgcacatcaagttcacagatgacccaacgcttgcgatt
tgcaacgacagcggaggttccgtgttcgagctgacatttaagagggtgatgggagtgagg
acgtgtgagtctcgatgtctgttcagcggctccaagggcgaagtttgctgcatcgagccc
ctgcacgccaagacggaactgagagaccaccccatcacccagtactcgctgctggccatg
gcgtccctgaccaagatactagtgatcggattgaaaccatctttgaaagtgtggatgact
tttccctacggacggatggagccctccagcgttcccctcctggcctggcacttcgtcgcc
ttacagaattccgtgaatcccatgctggccttctgcaggggagacgtcgttcattttctt
ctggtcaagagagatgaatctggggccattcatgttactaagcaaaagcagcttcacctg
cactatgacctcatcaacttcacgtggataaactcgcgcacggtcgtgctcctggacagc
gtggagaagttgcacgtgatcgaccggcagactcaagaggaactggagacggtggaaatt
tcagacgttcagctcgtctacaatagcagccacttcaaatccctggccacgggaggcaat
gtcagccaagccctggctctggttggggagaaggcctgctatcagtctatcagtagctac
agtggccagatcttttatttaggcaccaagtctgttcatgtgatgatgttgaggagctgg
agagagagagtggatcacatgctgaaacaagactgcctgacggaagccctggctctagcg
tggtcatttcacgaagggaaagccaaagcggtcgtcggcctgacgggggacgccggcaag
agaaaggccgtcgtggcagatcggatggtagaaatcctattccattatgctgataaagct
ttgaagaaatgcccggaccagggcaaaatccaagtgatggagcaacatttccaggatatg
gtgcctgtcatagttgattattgccttctgcttcagcgcaaggatctcttatttagccag
atgtatgacaaattaagtgaaaattcagtggctaagggggtctttctggaatgcctcgag
ccatacgttttaaatgataaattagtggggatcacagcccaggtgatgaaagatttgctg
gttcactttcaagataagaaattaatggagaatgtggaagcgctgatcgtgcacatggat
atcaccagcctagacattcagcaggtagttctcatgtgctgggaaaatcatctgtacgat
gccatgatctatgtctacaacagcggcatgaatgaattcattagtcctatggagaaactc
ttcaaagttattgctcctcctctcagtgcaggaaagtccctgacagatgaacaggttatt
atgggcaacaagcttcttgtgtatataagctgctgcctggcaggtcgagcctatcccctc
ggcgacatcccagaagatctcgtccctctggttaaaaaccaggtcttcgaatttctcatc
cgcctccactcagctgaggcttcccctgaggaagaaatctacccttacgtccgcacactc
ctgcacttcgataccagggaattcctcaatgtgctcgcactgacttttgaagattttaaa
aatgataagcaagcagtggagtatcagcaacgaattgtggatatcttgctgaaggttatg
gtggagaactccgactttaccccttcgcaagttggatgcctttttactttcctcgcccgg
cagcttgcgaagccagacaacacactgtttgtgaacaggaccctttttgatcaggtcctc
gaatttctctgtagccctgatgatgactcacggcactctgaaagacagcaggtcctctta
gaactgctgcaagccggaggcatagtacagttcgaagagaatcggcttatccgaatggca
gaaaaggcagaattctatcaaatttgtgaattcatctacgaacgggaacaccagtatgaa
aaaattatcaattgctacttacgtgatccactgagagaggaagaagtttttaattatatt
cacgacattttgtcgattcctgggtacagcgtcgaggagaaacagtctgtgtggcgaaaa
gctatggaccgtatggaggaactggtgaagctgaatccctccaaggctgcagagttggtt
gccacccacttcatggaacaaatcgaagcagttatccaaaaactccagaaccagtttttg
cttttccagtttctgaggagtcttcttgacccaagggaaggaaatcatgtgaatcaggaa
ctgctgcaggtttctccatttatcagtgaacagttcattgagctgctgtgtcaatacagc
cctaaccaggttagagagaccctgcaggtgctggaatgctacagactagaggaaaccatt
cagattactcagaagtatcagctccttgaagtctcggcctacctcctggagaagaaagga
gatgtgcatggggctttctcagtaatgcttgagagactacagagcaaactgttggagctc
acacatgaaaatgagacggacccgtccctaaaggatgttgaagatgtcttgggagaaacg
attgccctttgccagagaaattcacatagtttaaatcagcagcagcgagaggccttgtgg
tttccgctgttggaggcaatgatggcccctcagaagctgtccgactccggagccccacat
ccacagactgactctctgaagcgtctgacgatgcaggtgctgaatagcatggcggcgttt
attgccctgccatccatcttacaaaggatcctacaggatccgatttatggaaaaggaaaa
cttggagaaatccagggtcttattctgggaatgctggacacctttaactatgaacagaca
ctcctggaaaccaccactagcctcttaaaccatgatctccattggtcactcagtaacttg
agagcatcgatcacaaaaggattaaatcccaaacaggattactgctgtatatgtctgcag
cagtataagaggcgacaagaaatggccgatgaaatcattgtctttagctgtggtcacctg
taccactccttctgcttgctgaacaaagagtgcggcataaacaccgagggccaaataagg
tggatttgctacaaatgcaattcaagtaacaaagctgggaagctaagtgaaagtgcaccg
gagatgaaaaaaggaagactaactcaagcccaggccaaagtgtcaccagcttatcattca
ccccgaatggattctgctgctaaaaagggaggctcagagccgattttggatccacagcaa
atccaggcttttgaccagctctgtcgcctcttccgaggaccttctaggctggccctcctg
acggagctgtcccagacccgcagaagcgagagccacggcctgctcggagctgcccagagg
ggtccggccccctacagcgtcttccagaatgaaaacttccagctgcacctcacccctcct
cctctcaccgaggactga
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