Ornithorhynchus anatinus (platypus): 103168298
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Entry
103168298 CDS
T01045
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oaa03036
]
103168298 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oaa03037
]
103168298 (ALMS1)
Chromosome and associated proteins [BR:
oaa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
103168298 (ALMS1)
Cilium and associated proteins [BR:
oaa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103168298 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
103168298
NCBI-ProteinID:
XP_028939120
LinkDB
All DBs
Position
18:complement(14548257..14671028)
Genome browser
AA seq
2693 aa
AA seq
DB search
MERPPGEAEGAGRGRPNWSQPKTDSWHQLSAEIDLTQGMDTTRTSSSPLRGEGHLSELPS
LEEGPLVSPEDGGKEKATFSPSLAFGDSGISPHLPLAASSPPQEPKVWDDDTSFQRTDLD
FAPLRATPDQSEMTEGHSRPSRPSEALLSAASGAAPDLANSRVSLSRHTLAATGYDASLS
QHPFTLPGQEDDEGPASPEPDGGHPGPSGADGLRVLGSQTSREGQAQTAPASASPNPGAG
AQAYFPEERPAPFLLGLLEKEVGLLTSLEAPSFSGRRPSCEPVSPGNPEESQVRPEASPS
ESAETPSVEFGEEPPPIFTEEEMAPEGASSGFLEGQPVKNPPRPSANCGKSPEAPPAAGA
DAADVRGRPSGRTTRSVGGPPGKSPVAKFPRQQQKEAPPSSPDQPGANEPAPLRAATVDF
SGREIRPEGSGAKTSASSGDSSGGEKKERDSPLWSHPFLDEKSFFRRLTRPIHQSTPGLS
AAKAVTREGGFRPLPVTPDPQASLSCRSDGTSESPGKPPVPNRAPPPSDGNTNRDNFPPG
GMVPPLPTLSFLEKIGAWDTRPRDDRSPEVPAAPGPCGVSGRPRAREVIAGSSGRTLSPV
GGSPVGGAESGMSPPAREGMPLDASRPRSGDGVGQERPRPEAADVPSRGDGRAGPLGLPD
VTSDEAEGRRSGLGVPGSAPWADPGKTGGARASGRDAGPSEERGVEALGGDGREERSLRR
NGSEPSRGPDVSAGLLPVNRFGAVFPEDGVNRPAPLPASAGAVEVAATSVPVAPEPSVDS
LGAEEICSPSPPQTPTERELNIEDRIPVYLRNLGIDQSPSSILTPFVPRGPIREPEFSPS
EFSASRLSSDALRKTVAASGGGSPQTAGMSQSSSVSGTSVLDASIPSDSDTGPDSPSPQL
DGRSPSETPINQRSDFFRQAADRTSPAEDPGGRRWGALPPLEPPARGDATAPSAARRHGE
SPGPVAERVRALIDSLGLRDCDLNSKDAPSRLLFASLFATGAKDGSPSPDVKPPGGWEKR
GVGNPPAVGSATLKEVRTLLAEAEDEVLKRFDPVPHLVPFRELGDFSTASLEDPVLPRDS
SFAEETGGASPPAGSPPWNESLAADIAREEANPLKMPCSLRREGRREPLVGRTPIERTAS
REGFERKTRMASEETPGQYEATKSPRRCEPEGCSGATGAKTVPAVPVGGAEADSEADSEA
SGTRGPLRLVPRHPPPGPARVNVTGEPGAESDGGSGSSGDSLAARVRKLLRNETPGSRAP
SLRPEDVKSPVGSLAWGKLHPSSLELTEEDRRRVEAIRSQLLLTERNSGFGESPRKGGFL
TATAERPRVRSRTPTPPERGTGQAPGSRGAQPVSCGDRSGASDPEFRTWTSMPSPGHRPP
QTPAADTVSPGTGLRTPFCEEDDGRLSRAAGERSTPPQVGALDPDGPFPGASKRITSITF
ASRRRSKSFSGSPPGKNPLAAESLGGFGSLPTEEERQGDEEEALYPASSRRLSRSLERGL
NFSSESDKLSREVAWDVEDSRRKSHLSAAADLGAWEAGPGPGLGGGGYEGIQSPLRDVFW
RTGGIYSVDSDTETSAGLGLPAESPRGSTEPRWGHGVPATDQKRESPSRFPQTFLTNHAC
VGGEDKPYFPPEVTQADSSSAVPPSSPAQGAGVTPASCPSPTRKALSCVRITLSPQSANS
QTAAGASVQRAGASVAGARARPSDRFELSPEAGFSKAPSLASTSKLLTAHPPPHAQTTGG
FPPPKSAGPSPLPDGLAATQELDRSYSGKSQAGPVSRRTQVDISDSIGHPARLSEDLGTA
ASPPTGRPSSSDAITQITTESPEKTTFSAEIFVNGEAGESALPEPPRRKVQGPPNPPPPW
SPNQFAAPRGPDGERMESHARCLDQRGFPPGDPPNVQPLLLPYKPSRSAAMYYVPHPKEI
PRYPRTTSESTSESTHSGSNDAVAPEFPAEALGRRDESLSGVGAGKHEEGIYSKRARPRV
AWAEGKTTFQEATAESHERFGLADPPRPTLRPAQFSLHPSACGERDPDLGSPEPPGKGAG
RPPGREDFFPFRPAGERDEPGLSPLYRGPREEDRFSPLRAEPDHGRTESPGFQVALGRGQ
SRQAAQKANGDPGAGLSVSRPPGDEETGRDATRHPDGEGDLWTRFPERQEAPRLPQSSRW
SEPSLVERLERLARLLRIPNWNSLLLPEGEREDPKGWPGDGGRGQRRGPREKQRPRKEGE
GLDVPPGPSGAYLTPGPWRDPRPEAQRACSPQSKQAPPQWPDSDVASGASPHPGSVASPS
DQASRAGTEALTEASASVSSIDTARLVRAFGPERVCVSPRLSQLYRAISRQKTHPGRAGR
RRGTAADAQHPKMASERGRGREGTEVGYATSSASVSTLSWGPSSALRKKRSVQMHHKSVQ
VGDLEIVNSATKKNTRDVGLTFPTPRSGPERPRVGWSLAGTAFPRSGPGGSPQPGDGRDA
KRPADVGDRKSRKSRWHPPEGLSWFVPAESVKADARKENRAGPGPAWFEPLTGAKPWREP
LREKNWQELAELSRAMAGVRPAAPWSGRDEGQEAPKPFVKASLQESLALHRPDFISRSRE
RVKQLKSVTAQRKLQRALLRERDEFFGSSDHWRGCRDASCPLSVRGFLMAQKRIIPKKEM
LQRSKRIYEQLPEVRKKREDEKRRAEYSSYRLKAQLYKTKITNRVLGRKASWE
NT seq
8082 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccccccggggaggcggaaggagcaggccgggggcgtccaaactggtcccag
ccgaaaacggactcttggcatcagctctcggcggaaatagacctcacccaagggatggac
acaaccaggacgagttcgagcccgctgaggggcgagggacacctctcggagttgccctct
ctggaggaaggccccctggtctcaccggaagatggagggaaagagaaggcgacgttttcc
ccctcgctagcttttggggacagcggcatctctccccacctccccctggcggcatcctcc
ccgccccaagagcccaaggtctgggacgacgacacctccttccagcggaccgacctggat
ttcgcccctctgagggcgaccccagatcagtcggaaatgaccgaagggcactcgaggcct
tcgcgacccagcgaagccttgctctcggcggcttcgggagcggctccggacttagcgaac
agccgtgtcagtctgtcgcggcacacgcttgccgctacgggttatgatgccagcctctcc
cagcacccctttactctgcccggccaagaagacgacgaagggcccgcctcccccgagcct
gacggcgggcacccgggccccagcggagcggacggtttacgagtcctcggttcgcagact
tcccgggaagggcaggcccaaaccgcccccgcgagcgcgagcccaaatcccggtgcggga
gcccaggcctatttcccggaagagaggcccgctcctttcctcctggggttgttggagaag
gaagtagggctcctcacttctctggaggccccctctttttcgggcagaagaccctcgtgc
gagccagtctctcccgggaatcccgaggagagccaagtcaggccggaagcgagtccttca
gagtcggcggagacaccgtcggtagagttcggggaagaaccccccccgatatttaccgaa
gaggagatggctccagagggcgcgtcttccgggtttttagagggacagcccgttaagaat
cccccccgtccgtcggcgaattgtgggaaatctccggaagctcccccggccgccggggcc
gatgctgccgatgtccgagggcggccctccggccgtactactcgttccgtcggcgggccc
cccgggaagtccccggtggcgaagttcccccgacagcagcagaaggaagcccccccgtct
tccccggaccagcccggcgctaacgaacccgcacccctccgggcggcgactgtcgatttt
agcgggcgggagatccggcccgagggcagcggggccaaaacgtctgcctcatctggtgac
agttctgggggggagaaaaaggaaagagacagtcctctctggagtcacccgttcctggac
gagaaatctttcttccgacggctgactcgtcccatccaccagtcgactcctgggctgtct
gcagccaaagccgtcacccgagaaggaggcttccggccccttcccgtcacccccgacccg
caggcctcgctctcttgtcggagcgacggaacgtccgagagccccggcaagcctcccgtc
ccgaatcgggccccccctccgagtgacgggaatacgaaccgggacaactttccccccggg
gggatggtccctcctctcccgactctgagtttcctggagaagatcggagcctgggatacc
aggcctcgagatgacaggtcccctgaggtgccagccgcacccggcccgtgcggcgtctcc
ggcaggccgcgagcccgggaggtgatcgcggggtcctcgggccgcaccctgtccccggtg
gggggctctcccgtcggtggggcagagtcagggatgagcccgcctgcccgggaagggatg
ccgcttgacgcctcccgcccgcgctcgggagacggagtgggccaagagaggccgcggccc
gaagccgctgacgtcccgagccgcggcgacggcagggccggcccgttaggactccctgac
gtcacgagcgacgaggctgagggccgaagatccgggctcggcgttcccgggtccgctccc
tgggcagatccgggaaagaccggcggagcccgggcctcggggcgggatgccggcccgtct
gaggagagaggcgtcgaagcgctcgggggtgacggacgagaggagcgcagcctgcgccga
aacggctccgaaccgtcccgtggcccagatgtttccgctggtctcctccccgtgaaccga
tttggcgccgttttcccggaggacggcgtgaaccgtccggcacctctgcccgcgagcgct
ggggcggtcgaggtcgccgccacctccgtcccagtggcccccgagccgtcggttgacagt
ttaggagccgaggagatctgctcgccctctcctccgcagacaccaaccgagagggaactg
aacatcgaagatcgaatacccgtttaccttcgtaacctcggcatcgaccagtcgccttcg
agcatcttgacccccttcgttccccgagggccgatccgggagccggagttctccccctcg
gaattcagcgcgtcgaggctctcctccgacgctctccggaagactgtcgcggcctctgga
ggaggctccccgcagacagccggaatgtctcagtccagctccgtctccggcacctccgtc
ctcgatgcgtccatcccctcggattcggacaccggccccgattctccatcaccccagctc
gacggacgatccccctcagagacccccatcaatcagcgcagcgacttcttccggcaagcc
gccgaccggacgtcacccgccgaggatccgggcggacgccgttggggggctctaccgccg
ctcgagccgcccgcccggggagacgcgacggccccctccgccgcccgccgtcacggagag
agccccgggcccgtggcggaacgtgtccgggctctaatcgattcgttgggcttgagggac
tgcgacctcaactctaaggatgccccttctcgtctgctcttcgccagtcttttcgcgacg
ggagcgaaagacgggtccccgtcgcctgacgtgaagcctccgggtggttgggaaaagcgg
ggtgttggaaatccccccgccgtcggatccgcgaccctcaaagaggtcaggacgctcctg
gcggaggcggaggacgaagtcctgaagaggttcgatcccgtccctcaccttgtccctttc
agagagctcggggatttttcaacagcctcactcgaagatccggtcctcccccgggactcg
tcctttgccgaggaaaccgggggggcctcgccacctgcgggatcgccgccgtggaatgaa
agcctggccgccgacatcgcgcgggaggaagccaacccgctgaagatgccctgctccctc
aggcgagagggccgtcgggagcccctcgtcggccggaccccgatcgagaggacggcctcg
cgggagggattcgagaggaagactagaatggcctcggaagagacccccgggcagtatgag
gccaccaaatctccgcggagatgtgagccagaaggctgcagcggggccaccggcgctaaa
acggtcccggcggtcccggtgggcggggcggaggccgattcggaggccgattcggaggcc
tcagggactcgagggcctctgcggctcgtccccagacaccctccccctggcccggcccgg
gtgaacgtgacaggagagcccggggcggagagcgacgggggcagcggtagcagcggagac
tctttggccgcccgagtccggaaactcctgcggaacgaaaccccggggagccgcgctcct
tcactgcgcccggaggacgtgaaaagccccgttggatcgctcgcctgggggaaattgcat
ccgagcagtctagagctgaccgaagaggacaggagaagagtagaagcgatcaggtcccag
ctgctcttgaccgagaggaacagcggatttggagagagtccccggaagggaggcttccta
accgcgactgccgaacggcctcgggtgaggagccggacacctacccctccagagcggggt
acaggccaggccccgggatctcggggggctcagcccgtcagctgcggcgaccgatccgga
gccagcgaccccgagttcagaacgtggacatccatgccctctcccggccaccgcccacct
cagacccccgcagccgacaccgtgagccccggcaccgggcttcggacgccattctgtgaa
gaggacgacggccggctgtcgagggccgccggggaaaggtccaccccgccgcaggtgggg
gcccttgacccggacggcccgttcccgggagcctccaagcggatcacgtccatcactttc
gcctctcgcaggcgttccaagtccttctcaggttcaccccctggcaagaacccgcttgcc
gcagagtctctgggaggcttcggctctcttcccaccgaagaagagagacaaggcgatgag
gaggaggccctctaccccgcttcgagcagaaggctgagccgttccctagagagaggcctg
aatttctcctcggagagcgataagctgtcccgtgaggtggcctgggacgtcgaagactct
cgccggaagagccatctgtcggcggcggcggatcttggggcttgggaagccgggcctggg
cccgggctaggagggggcggttatgagggaattcagtctcccctgagagatgtcttttgg
cggacgggaggaatctacagcgttgacagtgatacggagacaagtgcgggtctgggcctc
cccgccgagagccctcgggggtcaacagagcctcgttggggccacggagtcccggccaca
gatcagaagagggaaagtcccagccgatttccacagacttttcttacaaaccacgcgtgt
gtcgggggagaagacaaaccctattttcctccggaagtcacgcaggcagactccagcagt
gccgttcccccatcctctccagctcagggggcaggcgtcacgcccgcctcttgcccgtct
ccaacccggaaagccctctcgtgcgtccgcataacgctctccccgcaaagcgccaattcc
caaacggcggccggcgcctcagttcagagagcaggcgcgtcggttgccggggcccgagcg
cgaccgagtgaccgattcgagctcagtcccgaggccgggttttcaaaggctccttcgcta
gcgtccacctccaaactgctgaccgctcaccctccaccacacgcccaaacaaccggaggt
ttccctcctccgaaatccgccgggccgtctcctcttccggacgggctggccgccacccag
gagctggaccgatcgtattccggtaagagccaggcgggacccgtttcgagacggacccaa
gtggatatttccgattcgatcgggcatcccgcccgtctctccgaggacctcgggacggcc
gcttctccccccaccgggagaccgtcgtcgtccgacgccatcactcagataacaacggag
agcccggagaagaccacgttctcggccgagattttcgtgaacggcgaggcgggcgaaagc
gccctccccgagccccctcgccggaaggtacagggccccccaaatccgccgccgccgtgg
tccccgaaccagttcgccgctcctcgagggccagacggtgagagaatggaatcgcacgct
cgctgtctagatcagcgtgggtttcctccgggtgaccccccaaatgttcagcccttactc
ctgccatacaagccttccagaagtgcggccatgtactatgttccccacccgaaggaaatt
cccaggtacccccggaccacttcggagtccaccagtgagagcactcactcagggtccaac
gatgctgtggctccggaattcccggctgaagcgctcggccggagggacgagagtctgtca
ggcgtcggagccgggaaacacgaagagggaatttacagtaagagggccagaccgagggtt
gcctgggctgaagggaaaacgaccttccaggaagccactgcagagtcccacgagcgtttc
ggcctcgccgacccgccccgtcccaccctcaggcctgctcaattttcccttcacccatca
gcgtgcggagagcgcgatcccgacttgggatctccggagcccccgggaaagggtgccggt
cggccacctgggagagaagacttctttccgtttcgcccggccggagagcgggacgaacct
ggcctctctcccctgtaccgagggcccagagaggaggacaggttctcgccgttgagggcc
gagccggatcacggccggacggagagtcccggattccaggtggctctggggaggggacag
tcgaggcaggccgctcagaaggccaacggtgaccccggagccggtctctccgtgagccgt
cccccgggggacgaggagacgggccgagatgccacccggcaccccgacggcgagggcgac
ctctggaccagatttccggagcgccaggaggccccccggcttccccaatccagccgctgg
tcggagccgtccctggtggagcggctggagcgcctggccagactcctccggattcccaac
tggaattctctcctgctccccgaaggcgagcgggaagaccccaaagggtggccaggtgac
gggggacgggggcagaggcgcggtccccgggagaagcagcggcccaggaaggagggggaa
ggcctagacgtcccccccggacccagcggggcctatttgacgcccgggccgtggagagac
cctcgccccgaggcccagagggcctgctccccacagagcaagcaggccccgccgcagtgg
ccagactcagacgtcgcgagcggcgcctctcctcacccggggagcgtcgcctcgccgtcg
gaccaggcctcccgggccgggaccgaggccctcaccgaggcgagcgcttccgtctcctcc
atcgacacggcccggctggtcagggccttcgggccggagagggtgtgcgtgtcgcccagg
ctgtcccagctttaccgcgccatcagccggcagaagactcacccggggcgggcggggaga
cggcggggaacggccgccgacgcccagcaccccaaaatggcttccgagcgcggcagaggt
cgagaagggacggaggtagggtacgcgacttcctccgcctcggtttccacgctgagctgg
gggccgagctctgccctcagaaaaaaacgaagcgtccagatgcatcacaagagcgttcaa
gtgggggacttggaaatcgtgaacagcgccaccaagaagaacacgcgcgacgtaggcctg
acattccccacgcccaggtcgggcccggagaggccgagggtgggctggagcctggccgga
accgctttcccacgttccgggcccgggggttcgccacagccaggagacggaagggatgcg
aagaggccggcggacgtgggggacagaaagagcaggaagagcagatggcatccaccagag
ggcctctcctggttcgtcccggccgaaagcgtgaaagcggacgcgaggaaagagaaccgg
gccggccccggccccgcctggttcgagccgctgaccggcgcaaagccgtggagagagccc
ctgcgggagaagaactggcaagaactggccgagctcagcagggcgatggccggagtccgg
cccgctgccccgtggtcgggaagggacgaggggcaggaggccccgaagccctttgtgaag
gcctccctgcaggaatccctcgccctgcaccgccccgatttcatctcccgctccagggaa
cgcgtgaagcagctcaagtcggtgacggcgcagaggaaactgcagcgggcgttgctgagg
gaacgagacgagttcttcggctcctccgatcactggcgaggctgccgggatgccagttgc
ccgttgtctgtcagaggtttcctgatggctcagaagaggataatcccaaagaaggagatg
cttcagcgatccaagcgcatctacgagcagctcccggaggtgcggaagaagcgagaggac
gagaagaggcgagcggaatacagctcctaccggctcaaggcccagctgtacaagacgaaa
atcaccaatcgggtcttgggaagaaaggcctcgtgggagtga
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integrated database retrieval system
