Ornithorhynchus anatinus (platypus): 103168521
Help
Entry
103168521 CDS
T01045
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa01524
Platinum drug resistance
oaa03430
Mismatch repair
oaa05200
Pathways in cancer
oaa05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103168521 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103168521 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
103168521 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103168521 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oaa03400
]
103168521 (MSH6)
DNA repair and recombination proteins [BR:
oaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103168521 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Cementoin
Motif
Other DBs
NCBI-GeneID:
103168521
NCBI-ProteinID:
XP_028927300
Ensembl:
ENSOANG00000041939
UniProt:
A0A6I8PJL5
LinkDB
All DBs
Position
9:complement(59920796..59934284)
Genome browser
AA seq
1368 aa
AA seq
DB search
MSRQSSLLSFFSKSPKTAAAAAPTRAQTRTQAPTRTQTPTRTQAPAGGRRPRPHNGGPAP
PARRGRERDGAAPSAGLSAAPATHSNSCDFSPGDLVWAKMEGYPWWPCLVYDHPTDGTFL
RGEGKALRVHVQFLDDRPTRGWVSKRLLKPYTGSSCKEAQKGGVFFSAKPEIQRGMRLAD
DALRKDKSERLSLAVCDEPSEAEEEEEEEDEEEAEASGASAPEDNGERESEEEEVRPRRQ
RATRGAAAAAGRLKKRRVVSDSESEHGSSDADFQPDGGEAASSDDDDEASSGVDESDGEA
SSSSSSEPDADGPARAAAPKRKRASTGKGKSGGGEPPQAPGRAAGVASETREALRAFCAG
PQSAEPPAAAGDGPAPWYHETLPWLQEGRRRDACRRRPEDPAYDATTVHVPEDFLNTCTP
GMRRWWQLKAENFDLVIFYKVGKFYELYHMDAVTGVAELGLVFMKGGWAHSGFPEISFGR
YSDVLVQKGYKVARVEQTETPEMMEARCRRAGHVSKFDRVVRREICRVITKGTQTYSVLD
GSPSESHNRYLLSVREKEGAAEAAGGGSPRAFGVCFVDTSVGRFHVGQFADDRHCSRFRT
LVAHHAPVQVLFERGNLSAESRHVLQGSLASALQEGLAPGSQFWDAARTLKTLQEEGYFE
GAPLPPALRAMTAETDSLGLTPAESGELALSALGGCVFYLKKCLIDQELLSMADFEAFVP
VDRAAGPAAAEGVRPDRRVVLDAVTLSNLEVLRNGTDGSAEGSLLQRLDSCRTPFGRRLL
KRWLCAPLCHPASIEDRLAAVADLAAVPDRAAEAGELLRKLPDLERLLSKIHSIGSPLKS
QSHPDSRAVMYEETTYSKKKIVDFLSALEGFRVAGEAAGALGAAAGGFRSETLRRAVTVR
TADPPGGRFPDLTAELKRWDAAFDHQKARRTGVITPKEGFDPDYDRARDAIRAAEDGLND
YLEEQRRALGCKALVYWGGGKNRYQLEVPESLAARDLPGDYELKSTKKGVRRYWTKAIER
RLAELAGAEERRDAALKDCMRRLFYNFDLNHRDWRAAVECCAVLDVLLCLANYSRGGDGP
MCRPVILPHRDDAPPVLELRGSRHPCVSKTFFGDDFIPNDIVIGCEEEAGAGGGEALCVL
VTGPNMGGKSTLMRQAGLLVILAQLGCYVPAESCRLTPVDRVFTRLGASDRIMSGESTFF
VELSETASILQHATSHSLVLVDELGRGTATFDGTAIAHAVVRELSENIRCRTLFSTHYHS
LVEDYSHSGAVRLGHMACMVENECEDPSQETITFLYKFVRGACPKSYGFNAARLAHIPEE
VIRKGHKKAREFERLIQALRLFREVCLIAENSADSRTLRELLSPAEEP
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccagagctccctgctcagcttcttctccaaatcccccaagacggcggcggcg
gcggccccaacccgggcgcagactcgaacccaggccccgactcgaacccagaccccgact
cgaacccaggccccggcgggcggccgcaggccccgcccccacaacggaggaccggccccg
cccgcccgccggggcagggagcgggacggcgcagcgcccagcgcagggcttagcgcagcg
cccgccactcacagcaactcttgtgacttctctccgggggacctggtctgggccaagatg
gagggctacccttggtggccctgcctggtgtacgaccaccctaccgacggaaccttcctc
agaggggagggcaaagccctccgggtccacgtgcagttcttggacgaccggcccaccagg
ggatgggtcagcaagaggcttctgaagccgtatacgggttcctcgtgtaaggaagcccag
aagggaggggtgttcttcagcgccaagcccgagatccaaagagggatgagactggccgac
gacgccctccggaaagacaagagcgagcggctttcgttggctgtatgtgacgaaccctct
gaggcggaggaggaggaggaggaagaggacgaagaggaggcagaggcgagcggggcctcg
gctcccgaggacaacggagagcgggagagcgaggaggaggaagtgaggccgcggaggcag
cgggccacgcggggggccgccgccgccgccggccggctcaagaagcgccgggtggtgtcc
gactcggagagcgaacacgggagctcggacgcggacttccagccggacggcggggaggcg
gccagcagcgacgacgacgacgaggccagcagcggggtggacgagagcgacggcgaggcc
tcctcctcctcctcctccgagccggacgccgacggccccgccagggccgccgcgcccaag
cgcaagcgggcgtcgacgggcaaggggaagagcggcgggggcgagcccccccaggccccg
gggcgggccgccggcgtggcctccgagaccagggaggcgctgagggccttctgcgccggc
ccgcagagcgccgagcccccggccgccgccggcgacggccccgccccctggtaccacgag
accctgccgtggctccaggagggccggcgcagggacgcctgccggcggaggcccgaggac
cccgcctacgacgccaccaccgtgcacgtgcccgaggacttcctgaacacctgcacgccg
ggcatgcggcgctggtggcagctgaaggccgagaacttcgacctggtcatcttctacaag
gtgggcaagttctacgagctgtaccacatggacgccgtcaccggggtggcggagctgggg
ctggtcttcatgaagggcggctgggctcactcgggcttccccgagatctccttcggccgc
tactccgacgtcctggtgcagaagggctacaaggtggcgcgcgtggagcagacggagacc
cccgagatgatggaggcccgctgccggcgggccggccacgtgtccaagttcgacagggtg
gtccggcgggagatctgcagggtcatcaccaaggggacgcagacctacagcgtgctggac
ggcagcccctccgagagccacaaccgctacctcctcagcgtccgcgagaaggaaggggcc
gccgaggcggccggggggggctccccgcgggccttcggggtctgcttcgtcgacacgtcg
gtgggcaggttccacgtgggccagttcgcggacgaccggcactgctcccgcttccggacc
ctggtggcccaccacgcccccgtgcaggtcctgttcgagcggggcaacctgtcggccgag
agccggcacgtcctgcagggctccctggcctccgccctgcaggagggcctggccccgggc
tcgcagttctgggacgcggccaggaccctgaagacgctccaggaggagggctacttcgag
ggggccccgctgcccccggccctccgggccatgacggccgagaccgactcgctggggctg
acgccggccgagagcggcgagctggccctgtcggccctgggcggctgcgtcttctacctc
aagaagtgcctcatcgaccaggagctgctgtccatggccgacttcgaggcgttcgtgccc
gtggaccgggccgcggggccggcggcggccgagggggtccggccggaccggcgcgtggtg
ctggacgccgtgacgctgagcaacctggaggtcctccggaacggcacggacggctcggcc
gaggggagcctcctgcagcggctggactcgtgccgcacccccttcggccggcgcctcctg
aagcgctggctgtgcgctccgctctgccacccggcctccatcgaggaccgcctggccgcc
gtggccgacctggccgccgtgcccgaccgcgcggccgaggccggcgagctgctccgcaag
ctcccggacctggagcggctgctgagcaagatccacagcatcggctccccgctcaagagc
cagagccacccggacagccgggccgtcatgtacgaggagaccacgtacagcaagaagaag
atcgtcgacttcctctcggccctggagggcttcagggtggcgggcgaggcggccggggcc
ctgggggccgcggccggcggcttccggtccgagaccctgcgccgggcggtcacggtgcgg
acggccgacccccccggcggccgcttccccgacctgacggcggagctgaagcgctgggac
gcggccttcgaccaccagaaggcccgcaggaccggggtcatcacccccaaggagggcttc
gacccggactacgaccgggcccgggacgccatccgggccgccgaggacggcctcaacgac
tacctggaggagcagcgccgggccctgggctgcaaggccctggtctactgggggggcggc
aagaaccgctaccagctggaggtgcccgagagcctggccgcccgcgacctgcccggggac
tacgagctcaagtccaccaagaagggcgtcaggcgctactggaccaaggccatcgagagg
cggctggccgagctggccggcgccgaggagcggagggacgcggccctcaaggactgcatg
cgtcgcctcttctacaacttcgacctcaaccaccgagactggcgggccgccgtcgagtgc
tgcgccgtgctggacgtcctgctctgcctggccaactacagccggggcggggacggcccc
atgtgccgccccgtcatcttacctcaccgggacgacgcccccccggtcctggagctgaga
gggtctcgccacccctgcgtctccaagaccttcttcggggacgacttcatcccgaacgac
atcgtgatcggctgcgaggaagaggcgggagctggcggcggcgaggccctgtgcgtgctc
gtcacgggcccgaacatgggcggcaagtccaccctcatgagacaggcgggcctcctggtc
atcctggcccagctgggctgctacgtccccgccgagtcctgcaggctcactcccgtcgac
cgggtcttcactaggctgggcgcctctgaccgcatcatgtccggtgaaagcacgttcttc
gttgagctgagcgagacggccagcatcctgcagcacgccacctcccactccctggtgctg
gtggacgagctcgggaggggcaccgcgacgttcgacgggacggccatcgcccacgcggtg
gtgagggaactctcggaaaacatcaggtgccgcactctgttttcgacgcactaccactcc
ttggtggaggattattcccacagcggggcagtgcggctgggacacatggcctgcatggtg
gagaacgaatgcgaagacccgagccaggaaaccatcactttcctgtacaagttcgtgcga
ggggcctgccccaagagctacggcttcaacgccgcgcggctggcccacatccccgaggag
gtcatccggaagggccacaagaaggccagggagttcgagaggctgatccaggccctgcgg
ctgttccgggaggtctgtctgatcgccgagaattcagccgactcccggactctccgcgag
ttgctcagcccggcggaggagccgtga
DBGET
integrated database retrieval system
