KEGG   Ornithorhynchus anatinus (platypus): 103169581
Entry
103169581         CDS       T01045                                 
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
  KO
K26109  nuclear exosome regulator NRDE2
Organism
oaa  Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaa03019]
    103169581 (NRDE2)
Messenger RNA biogenesis [BR:oaa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     103169581 (NRDE2)
SSDB
Motif
Pfam: NRDE-2 HAT_Syf1_CNRKL1_N TFIIF_alpha Suf TAF4
Other DBs
NCBI-GeneID: 103169581
NCBI-ProteinID: XP_028913558
Ensembl: ENSOANG00000021759
LinkDB
Position
1:complement(51381163..51436692)
AA seq 1210 aa
MGENGRPRGTTFPKVHRAGLNVFCRRHLPSPPSVTRRRATEPGTMALFPAFAAASQAAEA
SAGGAPRRELDWLSNPSFCPEVAPLLHQHAEETAVLPKGSPPIRHPLTSELSEDSDANKE
LRHISKKQKKEKKKRKKHRHHKKTRKNHGQSSSSELDADSDFEKDKAARNVRDSQKKLEK
PNQDNEAAGVVGSHLVWLEDVQALTAETFRIDKKPDPANWEYKSLYRGDIARFKRKGDSC
LGINPKKQCISWEGATTKKKHSHKQVERYFTKSSVRLLSTDGVALCSKNKTLPPEPGSFI
AVKETEEVPSPATTCVNPLGVYDKSTTLWLQGRGPQDNEAQEPVPQKDDANSHLGAKVEE
FNRKVRENPWDITLWMDFVSFQDELMKGPSLYTTGEGKQTSRKNSLKFILEKKLAILERA
IESNPNNIDLKLAKLKLCTELWEPSTLIKEWQKLIFLHPNNAALWQKYLLFCQSQFSTFS
VSKIHNLYGKCLSTLAAVQDGSIVSHPALPGTEEAMFALFVQHCHFLRQTGYSEKAVSLF
QAMIDFTFFKPDSVKDLSTRRQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQERGGWIEV
KPDEDEDDDPEEDDEEIKDKTLPKWQIWLNVERSRERRHWLPWRPDKTKKQTDEDCEDPE
RQVLFDDLEESLIQLSSPELKFQLLISFLQFLGVPSKYELSTSCLYLAMDESSIFENGLS
DDKPLTFLDLLFSGVSCIGHMDMMNRRQQLTGHCREGEEFIQNVFCVILPLFSGTERSHL
CFSWLQYEISKLTWNLQIKNKKKLKFQGKKCKKLAKNLLKEPENRNNLSLWKQFAHLEWL
LGNTEDARKVFDTAISMIGTEKLKNSSLCDLSLLYAELEVELLENLDGAVTSRAVHILTH
LTENGPFRPYSGQVLAVNILKARKAYEHALHSCWSTSLVSNSSSNCLRHLISLVGCFALF
QYLTVGIDAAVVIYKQTSEKLKELISEKFPSSGEGPGVTGLTRVLETVTLMHTNLLRYHM
KVSIYPLNPLREALTEAIKLYPGNHALWRSYIHIQKKSHHASKTRRFFDDINRYTKSLEP
MLFAIQAEKMRKKLVETVQRLDTGEIHSTIPETGLTNRIKVLFDNATQEESGTHCPLLWR
MYLHFLVSLGDKKGTGIFYRSLQSCPWAKVLYMDAVEYFPDQLQVIIDLMTEKELRVRLP
LEELELLLED
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgggcgagaacggcaggccccgcggaactacatttcccaaggtgcaccgggcggggctg
aacgtcttttgtcgccgccatcttccctcccccccttccgtgacgcgcaggagggcgacg
gagcccgggaccatggctctcttcccggccttcgcggccgccagccaagcggccgaagcc
tccgccggcggcgccccgaggcgagaattagactggttgagcaatccaagtttctgtcct
gaagttgcaccactcctgcaccagcatgctgaagagactgcagttcttcctaagggatca
ccacccataaggcatcctttgacatcagagttatcagaagacagtgatgctaacaaagag
ctcaggcacatcagtaagaaacagaagaaagagaaaaaaaaaaggaaaaagcatcggcac
cacaagaaaaccaggaaaaatcatgggcagtcaagtagcagtgagttggatgcagactct
gactttgaaaaggacaaagctgcaagaaacgtcagggatagtcaaaagaaattggagaaa
ccgaatcaggataatgaagctgcaggtgttgttggaagtcaccttgtttggcttgaagat
gttcaggctctgactgcagaaaccttcagaatagataagaagcctgatcctgcaaactgg
gagtacaagtctctttatcgaggggacatagcaagattcaagaggaaaggagactcctgc
cttggcatcaatcctaagaagcaatgcatatcttgggagggtgctactaccaaaaagaaa
cattcacacaaacaagttgaacgttattttacaaagagtagtgtgcgattattaagcact
gatggagttgctctttgcagcaaaaacaaaactcttccacctgaaccaggctcattcatt
gcagttaaagaaacagaagaggtgccctctcctgccacaacatgtgtgaatcctctggga
gtttatgataaatcaactacattatggttgcaggggcggggtccccaagataatgaagca
caggagccagtcccacaaaaggatgatgcaaactcacatctaggagcaaaagtggaagaa
tttaataggaaggtccgagagaacccctgggatattacgttatggatggattttgtttct
tttcaggatgagttgatgaaaggacccagcctgtatactactggtgagggcaagcagacc
agcaggaaaaattcactcaagttcatccttgaaaagaaattggccattttagagcgggct
attgaaagcaacccaaataacatagatttgaaacttgctaagttaaaactctgcacagaa
ctatgggaaccatctactctgatcaaagaatggcagaaactgatttttttacatcccaat
aacgcagccctatggcagaagtatctcctattctgccaaagccaattcagcaccttttca
gtatctaagattcacaatctctatggaaaatgcttaagtactttagcagcagttcaggat
ggcagcattgtatctcatcctgcattgcctggcaccgaggaagctatgtttgcactgttt
gttcaacattgccattttcttagacagactggctactcggagaaagcagtttctttgttt
caagctatgattgactttactttcttcaaacctgacagtgtgaaagatttgtccacaaga
agacaggtggaattctttgaacctttttgggacagtggagagcctcgggtaggggaaaaa
ggagcaagaggctggagagcatggatgcatcaacaagagaggggaggctggatcgaggtc
aagcctgatgaggatgaagatgatgatccagaagaagatgatgaagaaataaaggataaa
actctacccaaatggcagatctggttaaatgtcgaacgttctcgtgaacgaagacactgg
ctaccttggcgcccagacaaaaccaaaaagcagactgatgaggactgtgaagacccagag
aggcaggtattatttgatgatcttgaggagtctttgatccaactctctagcccagagctc
aaatttcaactgcttatttcatttctgcaattcttgggagtcccttccaaatatgagctc
tctacttcgtgcctctatcttgcaatggatgaaagcagcatttttgaaaatggactttct
gatgacaagccactgactttccttgacctactgttttctggagttagttgcataggccac
atggatatgatgaacagaaggcaacaactcacaggccactgtagagaaggagaggagttc
attcagaatgtcttctgtgtaatattgcctctgttctcaggaactgaaagatctcatctc
tgcttctcttggttacaatatgaaatatctaagctcacatggaatctccaaattaaaaac
aagaaaaaactgaagttccaaggaaaaaaatgcaaaaagctagccaagaatcttcttaaa
gaacctgagaacagaaacaatctctccctctggaaacagtttgcccatctagaatggtta
cttgggaacacagaagatgctagaaaagtttttgatacagcgatcagcatgataggaaca
gaaaaattaaaaaattcaagtctttgtgacctgagcctgctttatgccgaactcgaagtg
gagctgttggagaatctagatggagctgtcacttcccgtgcagttcacatcctaacccac
ctgactgaaaatggaccatttaggccttattctggacaggtgctagcagtgaacatcttg
aaagcccgcaaggcctatgaacatgccctccatagctgttggagcacaagcttggtttct
aactcatcctctaattgtctgagacatctgattagtttggttggctgttttgcacttttc
caatatctgactgtagggattgatgccgctgtggtgatatacaaacagacttccgaaaaa
ctgaaagaactgatttcagagaaattcccaagctcaggagaaggcccaggagtcactggt
ctcacccgtgttcttgaaactgtcacactgatgcatacaaacctactcaggtatcacatg
aaagtcagtatttaccccctgaatcctttgcgagaggcactcacggaggccataaagctg
tatcctggcaaccatgctctttggaggtcatatatacatatccaaaagaagtctcatcat
gctagcaagacaagaaggttttttgatgacatcaacaggtatacgaaatctctggagcca
atgttgtttgcaatccaagctgagaaaatgagaaaaaagctggtggaaactgttcaaagg
ttagatactggagaaatacattcaaccattcccgaaactggactaacaaatcgaatcaaa
gtcctatttgacaatgcaactcaggaggagagtggcacacactgcccattgttatggagg
atgtacttgcattttttggtatctttaggagacaagaaaggcacaggcatattctacagg
tcactgcagagctgtccgtgggcaaaggtgctgtatatggatgcggtggagtattttcct
gatcagctccaagtgataattgatctaatgacagagaaggagttaagagtaagactacca
ctagaagaattggaactgctactagaagattaa

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