Ornithorhynchus anatinus (platypus): 103170245
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Entry
103170245 CDS
T01045
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103170245 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
103170245 (LSM1)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103170245 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
103170245 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103170245
NCBI-ProteinID:
XP_028920150
Ensembl:
ENSOANG00000050496
UniProt:
A0A6I8NR29
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Position
5:complement(37854512..37868903)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKETDTPLQQVSIEEILEEQRVEQQTKQEAEKLKVQALKER
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggcaccgccagtctcatcgaggacattgacaagaaacacttggtg
ctgcttcgagatggtaggaccctcataggctatttaaggagcattgatcagtttgctaac
ctggtgttgcatcagacggtggaacgcatccacgtggggaaaaaatacggggacatacct
cgaggaatttttgttgtacgaggagagaatgtggtgctgctaggagaaatagacctggag
aaagagacggacactcccctccagcaagtgtcgattgaggagatactggaagagcagcgg
gtggaacagcagaccaagcaggaagctgagaagctgaaagttcaggccctcaaggagcgg
ggcctctccatccctcgagcagatactttggatgagtactag
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integrated database retrieval system
