Ornithorhynchus anatinus (platypus): 103170803
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Entry
103170803 CDS
T01045
Symbol
COL25A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103170803 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
103170803 (COL25A1)
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103170803 (COL25A1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103170803
NCBI-ProteinID:
XP_039769658
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Position
12:36963417..37513497
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AA seq
637 aa
AA seq
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MAGSRAATEKVRAEGVGGPVLGPLAGGLLSVLAVASCLYLGVQTSALRARVAAIEAGAAD
PWHRLSPASRHRLDEMMQDQLHRLLAQKSYEHLAKIRIAREATPACNCPAGPPGKRGKRG
RRGEYGPPGQPGPQGPPGPKGDKGDQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGP
PGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEHGLMGPQGPPGQKGSLGAPGMPGM
DGQMGEPGLPGSVGQDGIPGVKGDPGERGEKGDVGESGPKGDLGEKGDPGSSAAGIKGEP
GESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGMKGERGESGPTGRGERG
EPGAPGPKGDRGDKGDSGALGPRGPPGQKGDPGATEIIDYNGNIHDALQRITTLTVTGPP
GPPGPQGLQGPKGEPGSPGTPGADGEQGLKGSKGDIXDSGLPGEKGGIGLPGLPGSNGAK
GKKETRGLPGPQGPSIIGPPGPPGSHGPPGPMGPHGLPGPKGEPGVKWSKGLKGEPGQKG
DRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAVGNLDPEAHMVCPGKRE
RRQKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtcccgggcggcgacggagaaggtccgggcggagggcgttgggggtccggtc
ctgggcccgctggcgggcggcctgctgtccgtcctggccgtggcctcctgcctctacctg
ggggtgcagaccagcgccctgcgggcccgggtggccgccatcgaggccggggcggccgac
ccctggcaccgcctctcccccgcatcccgccaccgcctcgacgagatgatgcaggaccag
ctccaccgactgctggctcagaaatcgtacgaacatttggctaaaataagaatagcgaga
gaagccacgccggcgtgcaactgcccagcaggtcctccagggaaacgagggaagaggggc
agaagaggagagtatggacctcctggccaacccggtcctcagggcccccctggtccgaaa
ggcgataagggagatcaaggtgatcagggtcctcggggtctgccaggcttccctacagtt
gccgctctgcacagtaatcagatcctcaccgtcaagggtgaccaaggacaggctgggcct
cctggacccccaggcccccccggcccaagaggaccccctggggacactgggaaagacgga
ccccgtggaatgccaggagtaccgggcgaaccaggaaaaccaggagaacacggcttgatg
ggacctcagggacctcctggacaaaagggttctcttggagctcctggcatgccgggaatg
gatgggcaaatgggggaaccgggtttgcctggatcagtggggcaggatggtattccaggc
gttaagggtgaccctggagagagaggagaaaagggagacgttggcgagagtggacccaaa
ggtgacctcggtgaaaagggtgaccctggatcgtcagctgcaggaattaagggagaacct
ggagaatctggtcgcccaggacaaaagggtgaaccagggcttccggggcttcctggactt
ccggggataaagggggaaccagggttcatcggtcctcagggagaacctgggttgccaggg
ttaccaggaatgaagggtgaacgtggagaatcaggacctactggaaggggggagcgaggt
gaacctggagctcctgggccaaagggtgaccgtggagacaaaggagattctggtgctttg
ggaccccggggccccccggggcaaaagggagacccaggagcaacagagatcatagactac
aatggcaatattcatgatgccttgcagaggattaccaccttaactgtcacgggtccccca
ggaccacctggacctcagggattacaagggccaaagggagagccaggatctccaggaaca
cccggagcagatggagagcagggtctgaaaggctcaaagggagacatcngggactctggc
cttccaggagaaaagggaggaattggactccctgggttaccgggttcgaatggtgcgaaa
ggaaaaaaggagactcggggtctgcctggtcctcagggcccttccattattggcccgcca
ggaccacccggttctcatggcccaccggggcctatgggtcctcatgggcttccaggacca
aagggtgaaccaggggttaaatggtctaaaggattgaagggtgaaccgggtcaaaagggt
gacagaggaccccttggtcttccaggagcatctggcttagacggaaagccaggatcccgg
ggtacagatgggcctatgggtccccatggtccggcaggtcccaaaggagaaagaggtgaa
aagggagcagtagggaacctggacccagaggcccatatggtttgcccggggaaaagggaa
agaaggcaaaaggggcctaaaggggagaaaggagaacagggtgcccctggattagatgca
ccttgcccgttggggcctgatggattaccaatgcctgggtgctggcagaagtga
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