Ornithorhynchus anatinus (platypus): 114808759
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Entry
114808759 CDS
T01045
Name
(RefSeq) regulator of nonsense transcripts 1-like isoform X1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03013
Nucleocytoplasmic transport
oaa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114808759
03015 mRNA surveillance pathway
114808759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
114808759
Enzymes [BR:
oaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114808759
5.6.2.5 RNA 5'-3' helicase
114808759
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
114808759
mRNA cycle factors
Common to processing body (P body) and stress granule
114808759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
NPHP3_N
nSTAND3
ATPase
SLFN-g3_helicase
NAT10_TcmA_helicase
DEAD
UvrD-helicase
AAA_16
SRP54
UvrD_C_2
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
114808759
NCBI-ProteinID:
XP_028912435
Ensembl:
ENSOANG00000042739
UniProt:
A0A6I8PDA6
LinkDB
All DBs
Position
Y5:2012241..2147612
Genome browser
AA seq
1099 aa
AA seq
DB search
MSVQEYEPSSQTLTFLDSEEAELLGADTQGTEFEFADFTLPSQTQSSPGETVGHLNSQVN
APNNVQQNGAVDESLVKTSQPLAELNFEEDEEDTYYTKDLPLHACSYCGIHDPACVVFCI
ASKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIP
AKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPLEQEQLRARQIT
PQQMNKLEELWKENPSVTLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKIEADYDK
KLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLQYKGDLAPLWKGIG
HVIKVPDNYGDEIAIELRSGIGAPVEVIHNFQVDFVWKSTSFDRMQSSLKTFAVDETSVS
GYIYHRLLGHEVEDVIVKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK
TVTSATVVYHLARQGNGPVLVCAPSNIAVDQLTEKIDQTGLKVVRLCAKSREAIDSPVSF
LALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAEREILMNTDVICCTCV
GAGDPRLAKLQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA
GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAVDRVKKGFDFQ
WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQLGIITPYEG
QRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR
LSVALTRARYGVIIVGNPKALSKQSLWNHLLNYYKEEKVLVEGPLNNLRESLMQFSKPRK
LINAINPGARFMTTAMYDAREAIISGSLYDRNGPGRSSNMYFQTHDQVGMINSGPSHITA
MNIPIPFNLVMPPMPPPGYFGQTNGTALGQGTSKGKSGRVIRPKTRLGIPGTSHSNLPNS
QASQDVVSQPFSQGLMTQGYISMSQPSQMSQSGLSQPELSQDSYLGDEFKSQIDVALSQD
STYQGERAYQHGVTGLSQY
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcaggagtatgaaccaagttcgcagactctcacctttttggattccgaggag
gccgaactgctcggggctgacacccaaggaaccgagttcgagttcgcagatttcacgcta
cccagtcagactcagagttctcccggggaaacagtcggacaccttaactctcaggttaat
gcacctaataatgtccaacaaaatggtgcagtagatgaaagtcttgtaaaaactagccaa
cccttggcagaattgaattttgaagaagatgaagaggatacttattatacaaaggatctc
cctttgcatgcttgcagctactgtggtatccatgacccggcttgtgtagttttttgcatt
gccagcaagaaatggttctgtaatggtcggggaaacacttctggcagccacattgtaaat
catctggtaagagcaaaatgcaaagaggtgaccctccacaaagatggtcccctaggagaa
actgttttagagtgttacaactgtggatgccgtaatgtgttccttcttggcttcattcct
gccaaggctgattcagtagttgtactactatgcaggcagccgtgcgctagtcagagcagc
ttaaaagatattaattgggacagttcacagtggcagccccttatccaagatcgctgcttc
ctttcttggttggtaaagattcctttggaacaggaacaactgagagcacgtcagattact
cctcagcaaatgaacaaactggaagagctctggaaggaaaatccctcagtaactctggaa
gatcttgaaaagcctggtgttgatgaagagccgcagcatgtcctactcagatatgaggat
gcttaccagtaccaaaatatatttggtcctcttgtcaaaattgaggcagattatgataag
aaactcaaagaatcccagacccaagataacatcacagtaagatgggacctaggcctcaac
aagaaaagaattgcatatttcactttgccgaagactgactctgatatgcgtcttatgcag
ggagatgagatatgtctacaatataaaggagaccttgcccctttgtggaaaggaattggt
catgttattaaagtccctgataattatggtgatgaaatcgccattgaactgaggagtggt
attggtgcgcctgtggaagtcatccataattttcaagtggattttgtatggaagtctact
tcatttgacagaatgcagagttcattaaaaacatttgctgtggatgaaacttcagtatct
ggctatatttatcacagactgttgggtcatgaagtggaggatgtaattgttaaatgccag
ctgccaaaacgatttacagcccaaggtcttcctgacctcaatcattctcaggtttatgca
gtaaagactgttttacagcgccctctaagccttatccaaggaccccccgggactgggaaa
actgtaacatcagctacagttgtttatcatttggctagacaaggcaatgggcctgtgctg
gtttgtgctccaagtaacatagctgtagatcagctgactgagaagattgatcaaactgga
ctcaaggtggttcgcctctgtgctaagagccgggaggcaattgattctccagtttctttc
ttggcgttgcacaaccaaatcagaaacatggatagtatgcctgagctccagaaactacag
caattgaaagatgaaactggagaattgtcttctgctgatgaaaaacgttatcgtgcattg
aaacgaacagcagaacgagaaatacttatgaatacagatgtgatttgctgcacctgtgtg
ggagctggtgatcctcgccttgccaaattgcaatttcgttccattttaattgatgaaagt
actcaagctactgaaccagaatgtatggtaccagttgttctgggagccaaacagttgatc
cttgtaggagatcattgccaactgggccctgtagtgatgtgcaagaaagctgcaaaggct
ggactatctcagtcattatttgagaggcttgtggtactgggaatacgtccaattcgtttg
caagtgcagtatcgaatgcatccggcacttagtgcttttccttcaaacattttttatgaa
gggtcccttcagaatggtgttactgctgtggatcgtgtcaaaaagggatttgatttccag
tggccccagcctgataaaccaatgttcttctatgtgacccaggggcaagaagaaattgcc
agctcaggcacctcttatttgaataggacggaagcagcaaatgtggagaagataactaca
aaactattaaaagctggtgccaaaccagatcaacttggtattattactccatatgaaggt
cagcgatcctaccttgtgcaatatatgcagtttagtggttctctgcatacaaagctttat
caggaagtggaaatagcaagtgttgatgcattccagggtcgagaaaaggattttatcatt
ctttcctgtgtaagagcaaatgaacaccaaggaattgggtttttaaatgatcccaggcgt
ctcagtgtggcactcaccagagcaagatatggagtcattattgttggcaacccaaaggct
ctgtctaaacagtcactctggaatcatctgttgaattactataaagaagaaaaagtgctg
gttgaaggccccctgaacaacctccgcgagagtctaatgcagttcagcaaaccccgtaaa
ctcatcaatgccatcaacccaggagctcgattcatgactactgccatgtatgatgctcga
gaagctattatttcaggatctttgtatgatcgtaatggtccaggccgatcatcaaacatg
tattttcaaactcacgatcaggttggaatgataaattctggacccagtcatatcactgct
atgaatattcctataccttttaatcttgtgatgccacctatgccacctccaggatatttt
ggacaaactaatggtacagctctaggacaaggaacatctaaaggaaaatctggtcgtgtg
atccgcccaaaaactcgattggggattcctggaactagtcactctaacctcccgaatagt
caggcaagtcaggatgtggtgtcccagccattctcccaaggtttaatgactcagggctat
atttccatgagtcagccttcacagatgagccagtcaggcctttctcagcctgaattgtca
caggatagttaccttggtgatgaatttaaatcacagattgatgtagctctctcccaggac
tctacatatcagggtgaacgtgcatatcagcatggagtgactggcctgtcacagtattag
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