Ornithorhynchus anatinus (platypus): 114812154
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Entry
114812154 CDS
T01045
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
114812154 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oaa03000
]
114812154 (CIC)
Transcription factors [BR:
oaa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114812154 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114812154
NCBI-ProteinID:
XP_028921323
Ensembl:
ENSOANG00000036051
LinkDB
All DBs
Position
5:complement(4287841..4297106)
Genome browser
AA seq
1615 aa
AA seq
DB search
MYSAERRLLPAPGAARGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQP
ASHPVSSGQSKEPAESAAVAHEQPPGGAGGAEPGRPPGAACPGSPAPGPPQPPAGAAAEL
SRVAPQHPEDEAPGPAGESRLDSETESDHDDAFLSIVSPEIQLPLPPGKRRTQSLSALPK
ERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWY
ALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDVKPAAPGMGGGHKEMRERS
MSETGTAAAPGASTELLSAAAHTLLASEAKAPGSGGAERILPGGGPGPVRPRAFSHSGVH
GLEGGEADGQALQELTQMVAGPTPFAGQKPPSQYGGPGPFAAPGDAGALAGGGRPPPLPA
RTSRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFNAADIDLKCKERVTDSESGDSSG
EDPEGGKILGRKLYSPVIRSSSLSAAFTHCRPPLDPEPPGPPDPSAFPKGYGPSPSSSSS
SSSSSSSSTSSSSASSFQLAPGPFKPQEPGRGGVGGPLRVPPPPGGGPAPPKPRFLPAEG
GPYRRRRPESAGGAEASPPFPGASVIASPPGGAGGVLQALVLPPGGGLYPAKDASERDPG
GRLPSATVLVTAPPALGGGGLGYGALPAPPRPAPTVVTNVVRPVSSTPVPIASKPFPGGG
PGAPGLPAEGLHGKAEAAGRVPGGSPLGLVYADKKPPGPAVPPAAPHLVAGPLLGVGKTP
AAVTNLLVGAQGYGAGPPSALQFIAQGSPAGGPGSAGPAPGGGPNGPVPLGILQPGPLGK
AGGITQVQYILPTLPQQLPVAPGAKAGPGAGGPAAGGATASIHFALPPGGTANGKVLAAA
GPAPAIPILQPGPAATAPSGAGPKAQSASPVQAPPAGGSPQLLPGKVLVPLAAPGVAVRG
GGTGQPLPLVSPPFSVPMQNGAQPASKIIQLTPVPGSAPGGLVPPLSPAALSGPTCQSQK
VILPSSTRITYVQSSAGHPLPLGAGPAPGPPSSVALGFTTVGPAGQALVQPLLAGQAPLQ
VGMSPVPSPQLPPACAGGGGPVITAIYPGGPGTPSAVPLAQPPPPAPPGLLYTVAASTAA
PPAAILPKGGAPGPVAPASCQAPTSPFPSATGSVAYSLVAPKPQRPAPKPPQKVKAAIAN
IPVGSFEAGTPARPGPTPRPPPEASPAHEPPPEAEPKERSEAWDGRAASPPPEARAPARE
PPAPGGSPPPPSAEERPAVKGSEPATKFPSSPDWRVPGTESRTEPPTPPSPAPHPGSGPG
GGEGGSGRGAGSSDTPERKEGPGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEF
RPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPN
TPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFP
SAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGGEAPLPAAAPAAGEG
PDSPSAAGPDSSAPAPVPCAPPQTPQPPEPGEPGWDGPPPPSPQPPGPSTAPGGR
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggccgagaggcggctgctgcccgcgcccggcgccgcccggggcctcggcatg
ttcgtgtggaccaacgtggagccgcgttccgtggccgtgttcccctggcactcgctggtg
cccttcctggcgcccagccaacccgacccctccgtccagcccagtgaggcccagcagccg
gccagccaccccgtctcctccggccagagcaaagaacccgccgagtctgcagcggtagcc
cacgagcagccccccgggggcgccgggggcgccgagccgggccggcccccgggggccgcc
tgtcccgggagcccggcccccggcccccctcagccgcccgccggggccgcagcggaactg
agcagggtcgccccccagcatcccgaagacgaggccccggggccggcgggggagtcgcgg
ctggacagcgagacggagagcgatcacgatgacgcgttcctctccatcgtgtcccccgag
atccagctgccgctgccgccgggcaagcgccggacccagtccctgagcgccctgcccaag
gagcgggactcctcttccgagaaggacggccgcagccccaataagcgagagaaggaccac
atccggcgccccatgaacgccttcatgatcttcagcaagcggcaccgggccctggtgcac
cagcgccaccccaaccaggacaaccgcacggtcagcaagatcttgggcgagtggtggtac
gcgctggggcccaaggagaagcagaagtaccacgacctcgccttccaggtgaaggaggcc
cacttcaaggcccacccggactggaaatggtgcaacaaagaccggaagaagtcgagttcc
gacgtcaagccggcggccccggggatggggggcggccacaaagagatgcgggagcgcagc
atgtcggagaccggcaccgccgccgcccccggagcgtccacggagctcctgtccgccgcg
gcccacaccttgctggcctccgaggccaaggccccgggctccgggggcgccgagcgaatc
ctccccggcggcggccccggccccgtgcggccccgggccttctcccacagcggggtccac
ggcctggagggcggggaggcggacggccaggccctgcaggagctcacccagatggtggcc
ggcccgacccccttcgcgggccagaagcccccctcccagtacgggggtcccggcccgttc
gccgcccctggagacgcgggagccctggccgggggcgggaggcctcccccgctgccggcc
cggacctcccgctcccagcgcgcggccagcgaggacatgaccagcgacgaggagcgcatg
gtcatctgcgaggaggagggggacgacgacgtcatcgcggacgacggcttcaacgcggcc
gacatcgacctcaagtgtaaggagcgcgtgacggacagcgagagcggggacagctccggg
gaggacccggagggcggcaagatcctggggcggaagctgtactcgcccgtgatccgttcc
tcctcgctctcggctgccttcacccactgccgcccgcccctggaccccgagccgccgggg
ccccccgacccctccgccttccccaagggctacggcccgtcgccctcctcctcgtcgtcc
tcgtcctcctcctcgtcctcttctacctcctcctcctcggcgtcgtccttccagctggcc
ccgggccccttcaagccccaggagccggggcggggaggcgtgggggggcctctgcgggtg
ccgcccccgccggggggaggcccggccccacccaaaccccgcttcctcccggccgagggc
ggcccctaccgccggcggcggcccgagagcgccgggggcgccgaggcctccccgccgttc
cccggggcctcggtgatcgcctccccgcccggcggggccggcggcgtgttgcaggctctg
gtcctgccgcccggcggggggctctacccggccaaggacgcttccgagcgggaccccggg
ggccggctcccctcggccacggtgctggtgactgccccgcccgcgctgggcggcgggggc
ctgggttacggggcgctccccgcccccccgcgcccggcccccaccgtggtcaccaacgtg
gtccgtccggtgagcagcaccccggtgcccatcgcctccaagcccttccccgggggcggg
ccgggcgcgccgggcctgccggccgagggcctccacggcaaggcggaggccgccgggagg
gtgcccgggggctccccgctgggcctcgtctacgccgacaagaaaccccccggcccggcc
gtccccccggcggccccccacctggtggcggggcccctcttaggggtgggcaagaccccg
gccgccgtcaccaacctcctggtgggcgcccagggctacggggccgggcccccctccgcc
ctgcagttcatcgcccaggggagcccggccggcgggccggggagcgccgggcccgccccg
ggcggcggccccaacggcccggtgcccctgggcatcctgcagcccggcccgctgggcaag
gccgggggcatcacccaagtgcagtacatcctgcccaccctgccccagcagctgccggtg
gcccccggggccaaagcggggccgggggccggggggccggcggccgggggggccacggcc
agcatccacttcgccctgccccccggcggcaccgccaacggcaaggtcctggccgccgcc
ggccccgcccccgccatccccatcctgcagcccggacccgccgccaccgccccctcgggg
gccgggcccaaagcccagtcggcgtccccggtgcaggccccgcccgccggcggctcgcct
cagctgctgcccggcaaggtgttggtgcccctggccgccccgggggtggcggtgcggggc
gggggaaccggccaacccctgcccctcgtcagcccgcccttctccgtgcccatgcagaac
ggagcgcagccggccagcaagatcatccagctcactccggtgcccggatccgctcccggc
ggcctggtgccccccctcagtccggccgctctctccggtcccacctgtcagtcccagaag
gtcatcctgccctcgtccaccaggatcacctacgtccagtcgtcggcgggccacccgctg
cccctgggcgccggccccgcccccggccctcccagctccgtggccctgggcttcaccacg
gtgggccccgccgggcaggccctcgtccagcccctgctggccggccaggcccccctgcag
gtggggatgtcacccgtgcccagcccccagctgccgccggcctgtgccgggggcgggggg
cccgtgatcacggccatctacccgggcggcccggggaccccctcggccgtgcccctggcg
cagcccccgccccccgccccgccggggctgctctacaccgtggccgccagcaccgccgcc
cctccggccgccatcctgcccaagggcggggcccccgggccggtcgcccccgcctcctgc
caggctcccaccagccccttccccagcgccacaggttcggtggcctacagcctggtggcc
cccaagccccagcgcccggcccccaagcccccccagaaggtgaaagcggccatcgccaac
atccccgtgggctccttcgaggcggggacccccgcccggcccggcccgacccctcgcccc
cctcccgaggccagccccgcccacgagccgccccccgaggccgagcccaaggagcgcagc
gaggcctgggacgggcgggccgcctcgcccccgcccgaagcccgggcccccgcccgcgag
ccccccgcgcccgggggcagcccccctcctccgtcggctgaggaacggcctgccgtcaag
gggtcggagccggccaccaaattccccagctcccccgactggcgggtcccagggacagag
agcaggactgagccccccacgccccccagccccgccccccaccctggcagcggccccggc
ggcggcgaggggggcagcgggcggggggccggcagcagcgacaccccggagcgcaaggag
gggcccgggaagaaggtgaaggtgcggcccccgcccctgaagaagaccttcgactcggtg
gacaacagagtcctgtcggaggtggacttcgaggaacggtttgccgagctgcccgagttc
cggccggaggaggtgctgccctcgcccaccctgcagtcgctggccacctccccccgcgcc
atcctgggctcctaccgcaagaagaggaagaactccacagacctggactcggcccccgag
gaccccacctcccccaagcgcaagatgcgccgccgttccagctgcagctccgagcccaac
acccccaagagcgccaagtgtgagggcgacatcttcaccttcgaccgcacaggcacggag
gccgaggacgtgctgggagagctggagtacgagaaggtcccctactcctccctgcgccgc
accctggaccagcggcgggcgctggtcatgcagctcttccaggatcacggcttcttcccc
tcagcccaagcgacggcggcgttccaggcccgctacgccgacatcttcccctccaaggtg
tgcctgcagctcaagatccgcgaggtccggcagaagatcatgcaggccgccacccccacg
gagcagcccccgggcggggaagccccgctccccgccgccgcccccgcggccggcgagggg
ccggactccccgtcggccgccggcccggactcctccgcccccgcccccgtcccctgtgcc
ccgccccagaccccccagcccccggagcccggtgagccgggctgggacggcccgccgccc
ccctccccgcagccccccggcccttccacggcccccgggggcaggtga
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