Oxynema acuminatum: Oscil6304_0870
Help
Entry
Oscil6304_0870 CDS
T02368
Name
(GenBank) WD40 repeat-containing protein
Organism
oac
Oxynema acuminatum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Vps41
DSE1_N
Ge1_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
PD40
CFAP251_N
Tricorn_2nd
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
AAA_35
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_HPS5
WD40_RFWD3
ASA1
PAC11
Beta-prop_WDR41
Beta-prop_DCAF4
Nbas_N
Tricorn_N
Beta-prop_SPT8
DUF5711
Beta-prop_DCAF12
TP_0598_N
Beta-prop_ACSF4
Beta-prop_pof12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFY80603
UniProt:
K9TDV4
LinkDB
All DBs
Position
complement(1064095..1067610)
Genome browser
AA seq
1171 aa
AA seq
DB search
MEPFESSIYQVGGSLPANAPTYVVRQADTELYEGLKAGEFCYVLNSRQMGKSSLLVRTMD
RLQREGFICASIDLTKIGNKNVTAAEWYKGIFYELVKKLNFSGQINRRAWWQELDGIPVA
QRLSEFFEEVVLNQPDDDRQFIVLIDEIDSTISLNFELDDFFALIRAFRNLRSQNPAFNR
LTFALFGVATPSDLIRDKTRTPFNIGRGVELCGFEFEEAKKGLKAGFPETIEKPETLLRG
ILDWTGGQPFLTQKLCQWVRGAGTTPNGRETEWIAELVRTNLLENWEAQDNPEHLKTIRD
RLLRHEERAGRLLGLYQQILDSDERVKGNNSDEQMELRLSGLVVNRRGQLQVYNRIYEAV
FNRPWVERELANLRPYSEAIAAWLKSNRQDTSRLLRGKALQDALDWADKKDLSRDDYTFL
SASEQAVRKQIQEDLEAQRQANEILAQAKAKADRLLTEAKEATKLERAAVRVLRQFEAGM
SQIDLLIEAMQTGQQLQTWVGDNRLLRDYPVTSPLLTLQQILAHIREHNRLDGHSRGVWS
VSFSPDGQTLATASNDGTARLWDLQGKERAIFKGHSGRVTSVSFSPDGQTLATASDDGTA
RLWDLQGKERVTFKGHSSSLWSVSFSPDGQTLATASDDGTTRLWDLLGKERATFKGHFGR
VWSVSFSPDGQTLATASDDGTARLWDLQGKELATFKGHSGWVTSVSFSPDGQTLATGSDD
RTARLWDLHGNERATLSGHSSSVWSVSFSPSGQTLATGSDDGTARLWDLHGNERATFKGH
SGWVTSVSFSPDGQTLATGSDDATARLWDLQRNERATFSGHSGGVTSVSFSPDGQTLATA
SYDRTARLWDLQGNERSLFKGHSGPVRSVSFSPDGQTLATTSSDGTARLWDLQGNERVTF
KGHSSSVRSVSFSPDGQTLATGSDDGTIRLWDLQGNERSLFKGHSGPVWSVSFSPDGQTL
ATASDDRTARLWDLHGNEQVIFTRHSGPVRSVSFSPDGQTLATGSEDHTACLWDLQGNEQ
TIFFGHSRLVRGVSFSPDGQTLATASSDGTARLWDLHGNEQATFSGHSGRVFSVSFSPDG
QTLATGSEDRTARLWDLHGNEQATFSGHSSSVWSMSFSRDGQTLATASDDGTARLWLEEG
LAELLARGYDWLQDYFVSHPEAREKLTRCDK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctttgaatcctccatttatcaagttggcggtagtctgcctgcaaatgctcca
acctatgtggttcgacaggcagatacagaactctatgaaggcttaaaagctggggaattt
tgttacgtcctcaactcgcggcaaatgggtaaatccagtttgctcgtcagaacgatggat
aggctacaaagggaagggtttatctgtgcttctatagacttgacaaaaattgggaataaa
aatgtaacggctgctgagtggtataaggggattttctatgagttagttaaaaaactcaat
ttctccggtcaaattaatcggcgagcttggtggcaagagttggacggaatacccgttgct
caacgattatctgagttttttgaagaggtcgttttaaaccaacccgatgatgaccgtcag
tttattgtattgatagatgaaattgatagcactatttccttaaactttgaactagacgac
ttttttgcactgattcgagcctttcggaatctacgctcccaaaatcccgcgttcaatcgc
ctgacttttgccttgttcggagttgccaccccttcggatttgattcgggacaaaacccga
actccgtttaatatcgggcggggggtcgaattgtgtgggtttgaatttgaggaagccaag
aaggggttaaaggcgggatttccggaaacgatagaaaaaccggaaaccctgttgcgggga
attttagactggactggagggcaaccgtttttgacacaaaagctctgtcaatgggtgcgg
ggtgcggggacaactccgaatggcagggaaacggaatggattgccgaattggtgcggacg
aatctgctggaaaattgggaagcgcaggacaacccagagcatttaaaaaccattcgagat
cgcctgttgcgccatgaggaacgtgcagggcggttgttgggattgtatcagcaaattttg
gacagtgacgagagagtgaaagggaataacagtgatgaacagatggaactacgcctctcg
ggtttagtggtgaaccgccggggacaattacaagtgtataaccggatttacgaggcagtc
tttaatcgcccctgggtggaacgggaactcgccaacctccgcccctactccgaggcgatc
gccgcctggttaaaatctaatcggcaggatacctcccgactcttgcgggggaaagcgttg
caagatgctttagactgggctgataaaaaagacttaagtcgagatgattataccttttta
tctgccagcgagcaggcggtcaggaaacagatccaagaggatttagaggcacaacggcaa
gctaacgaaattttagcccaagccaaagcaaaagcagaccgcctactcaccgaagccaag
gaagccacaaaactggaacgggccgcagttcgagtattgcgacagtttgaagcggggatg
tcacaaattgacctcttaatcgaagcgatgcagactggccaacagttgcaaacctgggta
ggggacaaccgcctcctgagagactatcctgtcaccagtcccctgctcaccttgcaacaa
attctcgcccacattcgagaacataaccgcttagacgggcattctcgtggggtatggagt
gtgagttttagcccagacggtcaaaccctggccaccgcctctaatgacggcactgcccgt
ctgtgggatttacaggggaaagaacgggccatcttcaaagggcattctggccgggtaacg
agtgtgagttttagcccagacggtcaaaccctggccaccgcctccgatgacggcactgcc
cgtctgtgggatttacaggggaaagaacgggtcaccttcaaagggcattctagctcgtta
tggagtgtgagttttagcccagacggtcaaactctggccaccgcctccgatgacggcact
acccgtctgtgggatctactggggaaagaacgggccaccttcaaagggcattttggccgg
gtatggagtgtgagttttagcccagacggtcaaaccctggccaccgcctccgatgacggc
actgcccgtctgtgggatttacaggggaaagaactggccaccttcaaagggcattctggc
tgggtaacgagtgtgagttttagccccgatggtcaaaccctcgccactggatccgatgac
cgcactgcccgtttgtgggatttacacgggaacgaacgggccaccttatccgggcattct
agctcggtatggagtgtgagttttagcccgagcggtcaaactctcgccactggatctgat
gatggcaccgcccgtctatgggatttacacgggaacgaacgggccaccttcaaagggcat
tctggctgggtaacaagtgtgagttttagccctgatggtcaaaccctcgccactggatct
gatgacgccaccgcccgactgtgggatttacaacggaacgaacgggccaccttctccggg
cattctggcggggtaacgagtgtgagttttagccccgatggtcaaaccctcgccacggcc
tcatatgaccgcaccgcccgtctgtgggatttacaggggaacgaacggtctctcttcaaa
gggcattctggcccggttaggagtgtgagttttagtcccgatggtcaaaccctcgccacg
acctcatctgacggcaccgcccgactgtgggatttacaagggaatgaacgggtcaccttc
aaagggcattctagctcggtaaggagtgtgagttttagccccgatggtcaaaccctcgcc
actggatccgatgacggcactatccgactgtgggatttacaggggaacgaacggtctctc
ttcaaagggcattctggcccggtatggagtgtgagttttagtcccgatggtcaaactctc
gccacagcctctgatgaccgcactgcccgactgtgggatttacacgggaacgaacaggtc
atcttcaccaggcattctggcccggtaaggagtgtgagttttagcccggacggtcaaacc
ctggccactggatctgaagaccacactgcctgtctatgggatttacaggggaacgaacag
accatctttttcgggcattctcgcctggtaaggggtgtgagttttagccccgatggtcaa
accctcgccacagcctcatctgacggcaccgcacgactgtgggatttacacggaaacgaa
caggccactttttccgggcattctggccgggtattcagtgtgagttttagccccgatggt
caaaccctggctactggatctgaagaccgcaccgcccgactgtgggatttacacgggaac
gaacaggccactttttccgggcattctagctcggtatggagtatgagttttagccgggac
ggtcaaacccttgccaccgcctccgatgacggcaccgcccgtctgtggctggaggaaggg
ttggcggaactgctggcgagagggtatgactggttgcaagattattttgtcagccatccg
gaggcgcgagaaaaactgacccgttgtgacaagtga
DBGET
integrated database retrieval system